MELO3C006348.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AATGGCGGGAAGATTCGGGGATAAGAAATCCGCCAAAATTCTCTGACATCTTTTTTCTTTTTTCTTTTTTTTTTTCTTCCCGATTTAAAACCTTTGAATTCATTTGTGCATTTTCCTCACATGTCTTTCCTCGAAGAATTTCAAGCGAGTACGTACCATCTTCTCCCTTCTTTTCTTTTGCGGCAATTTCTCTTGATTCATAACTGTTTCAAAACCCTATCTCGTTAATTACTCTAATGCTTTCTTTGTTTTTATCCGATGGATTTTTACTGATATATGTATTTTTATATATGTTTCTGTTATTTCGTGATGTGCCCTTTTCTTGATTTATGGTAATGTCTTTCTGTTTTGGTTCTAGGATTGTAATCCTTTTGCGGGTGAAAATTTGTTCCTTTTTTTGCGTTTTGAATAATTGGGTTAGATAAAGTTGAGTATAATATTAGAAAGAAAGATAAATAAGTTTTGAAGATTGGGTTTGATAAAGTTAACAACAATGAGATTTTACATCTTCTATTTTACCTTTTATACAGACCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCATGATTTAGATCAAAGTTTGCAAGGTATGCTTCTTCTTTCATTAGCGATGTGCAATTAGTTTTCTAGATGGCTTTATTATTATCTTATTTGTTTCTCCTCTCTTTTTCTTTCTTGATTTTTTTTCTTTTTTATGGATGTTGGAATATGTTAATACTCCAAAATCATTTAATGGCCTCCTTTGTAATGTCACTGTTATTGTACTTTATGTTGGCATATGTGTTTAGGGATTTTCAAGAATGTTGCTCCATATGTGAATGCAGGACTAGTGAAACAGAATGAACAACGCTGTGAGCAAGAAATTGAGGATATTAAGAGGGGAGTTAAATGTGGTAATATTACTCCAGATACTTCACTCATTAGATTCTCTGATGAAGCTCTTGATGAACAGAAGCATAGCATCAGAATTGCTGATGAAAAGGTTGCCCTTGCTGTTCAGGCATATGATTTGGTATGTCGAAATGTCTTTGAAACCTTTCAACGTAGTGTGGTTTAACAGATTGTGTGGGTGACTTTGAACAGACGCGCACTGTACTTTATTATAATGATTAGGATATTAATTTTCTGCTTAGAATGATTCAAGTTAAAATAATAAAAGCAATAAAAACTAGTTTGACCATTTTTACAAAATGCAAATAGGGTGTATGATGTTTAATGCTTGTAATGAATGTTCTATGCTTCCAGTTTTGTACTTGTGCAGTTATCCTTTCCTACATCTTGCTTAGAAAAGAGCATTGCAAAAGCACCTTCATGTTTATCATTGTCATTGACTAACATGTAGAGAGAGGGGGAAGGAGTCTCCCAGGTTTCTCGTGTAGTCTCAAATCTCAATGACTAACACAGAAACTAATACCTCATCCTTGACCTCCAGCAGCTTCAACGATATTTTTTTCTTTTTTATCGTCTGTAACTAAGGATGTTGTTTTGTGTGTGTTTTCTTTTGTTATTTTACTAGAAAAAGGACAGGTCTTCTTCTCGTTGTTTGCATTTTTACTTCTTCTGTTTATTTGTATTGTGCTTCAGGTAGATACCCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCACGGTAATATCTTTGTTTCTACCTTTGATATCTTCTATTATTATGATTCTCTAGGCTCCTGCCAATATGGAGTATAAATGCATTTATCTTACTCATTTTGGGCCTAACTCCTATCTTCTATTTATCATTGTTATTTGCAGAAAGAGGTACTGCTGCTGCTACTGGGTTGCCAGCTTCAAGTGTAGATGGTAACACAAAATCTGGACGGGGAACAGAAGGGGGTAGAGGTGGGCGTAAAAAGTAAGTTAATTTCATACTTACATCAATGTGTGTATTTCACATGAACGATGTTGAAATTAATTGCCGACAAATGACACCAATTACTTAGGAGGTTGCCTTATTACTTTAGGCAGTCAATGTTTGTGATGAACTGGAGATACTAGTATATCCTACAGTAACATTTATTGTAGGCATGTTTAACAAGAGATTGAGGACATCTTCAATAATGAGACTATTTTCTGCAGAAGAAATGCCCAAGCTGCAGCTTCAACAACAGAAGCACCAACTACGGCAACTCCCACAGGAATGGAACTTGAATTACCAGTTGATCCAAATGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATGTATGTTACCATCCTTTCCTCCCACTATTTCCAAATTTTTTTGGTGGTTTGAGTCTATAAGCTAACCCAGTATTCTCTTTCATACCAGTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCAAAAGGAAAATGGTACTGTTCAGATTGTGCCGGCTCCAAAGGTCGCCGAAAAGGCAGATGATACAGGTATCAATCAGGAGTCTGCTGTCTAAATTTATATGAAAGACATTAAATTCAAATGTTATGCAGATCCTGCTCAGCTAGAGCTAGTCCATAAATTACTTGCAGTCCATGTAAATTCTGTTTTTGTTTTAATGCTGCTTTTAGTGTTCACGAAAGTTTTGAATTTGTAGAATCTTTGACAGTAGATCCAAATCATTAGGGCCCTTTCTCCCTTTCCCCATCCTGTGGGAGGTCGATCAAGTTTCTGCCAGGAAGGGTCAACTCATGAGAATTGAAGTGGGCCTTAAGACCATTAGAGGACAATACACAATAAAACACTGCTGTTCACTGTAAAACACACCGATCGGACCGGAGCTGTGTGGTTGGGGATAAAAAGGGAGATGCCTAGACATCTTTGGATGTTCGTTATGGGGGGACTTGAGGTATCCAATTTTTATCCATCTGTCTTGTCCCGTATAAGCCAACTAAATTATCTGTAGTGGTTAATTTCTGTATATTAATTTGTCCAATAAAGTTATTTCGAGTTCAGTTGATGTCGAATGAATGTGTATGTATTGGCATTCAATATGAAGAACTGAATTAGGTCATGTAACAATAAGATAGCTGTGATTTGTAGATGAGTGAACTAATGATATTAATATCATCATATAGGAGAAGTTAGCATATACCCGGTCA AATGGCGGGAAGATTCGGGGATAAGAAATCCGCCAAAATTCTCTGACATCTTTTTTCTTTTTTCTTTTTTTTTTTCTTCCCGATTTAAAACCTTTGAATTCATTTGTGCATTTTCCTCACATGTCTTTCCTCGAAGAATTTCAAGCGAACCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCATGATTTAGATCAAAGTTTGCAAGGACTAGTGAAACAGAATGAACAACGCTGTGAGCAAGAAATTGAGGATATTAAGAGGGGAGTTAAATGTGGTAATATTACTCCAGATACTTCACTCATTAGATTCTCTGATGAAGCTCTTGATGAACAGAAGCATAGCATCAGAATTGCTGATGAAAAGGTTGCCCTTGCTGTTCAGGCATATGATTTGGTAGATACCCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCACGAAAGAGGTACTGCTGCTGCTACTGGGTTGCCAGCTTCAAGTGTAGATGGTAACACAAAATCTGGACGGGGAACAGAAGGGGGTAGAGGTGGGCGTAAAAAAAGAAATGCCCAAGCTGCAGCTTCAACAACAGAAGCACCAACTACGGCAACTCCCACAGGAATGGAACTTGAATTACCAGTTGATCCAAATGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCAAAAGGAAAATGGTACTGTTCAGATTGTGCCGGCTCCAAAGGTCGCCGAAAAGGCAGATGATACAGGTATCAATCAGGAGTCTGCTGTCTAAATTTATATGAAAGACATTAAATTCAAATGTTATGCAGATCCTGCTCAGCTAGAGCTAGTCCATAAATTACTTGCAGTCCATGTAAATTCTGTTTTTGTTTTAATGCTGCTTTTAGTGTTCACGAAAGTTTTGAATTTGTAGAATCTTTGACAGTAGATCCAAATCATTAGGGCCCTTTCTCCCTTTCCCCATCCTGTGGGAGGTCGATCAAGTTTCTGCCAGGAAGGGTCAACTCATGAGAATTGAAGTGGGCCTTAAGACCATTAGAGGACAATACACAATAAAACACTGCTGTTCACTGTAAAACACACCGATCGGACCGGAGCTGTGTGGTTGGGGATAAAAAGGGAGATGCCTAGACATCTTTGGATGTTCGTTATGGGGGGACTTGAGGTATCCAATTTTTATCCATCTGTCTTGTCCCGTATAAGCCAACTAAATTATCTGTAGTGGTTAATTTCTGTATATTAATTTGTCCAATAAAGTTATTTCGAGTTCAGTTGATGTCGAATGAATGTGTATGTATTGGCATTCAATATGAAGAACTGAATTAGGTCATGTAACAATAAGATAGCTGTGATTTGTAGATGAGTGAACTAATGATATTAATATCATCATATAGGAGAAGTTAGCATATACCCGGTCA ATGTCTTTCCTCGAAGAATTTCAAGCGAACCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCATGATTTAGATCAAAGTTTGCAAGGACTAGTGAAACAGAATGAACAACGCTGTGAGCAAGAAATTGAGGATATTAAGAGGGGAGTTAAATGTGGTAATATTACTCCAGATACTTCACTCATTAGATTCTCTGATGAAGCTCTTGATGAACAGAAGCATAGCATCAGAATTGCTGATGAAAAGGTTGCCCTTGCTGTTCAGGCATATGATTTGGTAGATACCCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCACGAAAGAGGTACTGCTGCTGCTACTGGGTTGCCAGCTTCAAGTGTAGATGGTAACACAAAATCTGGACGGGGAACAGAAGGGGGTAGAGGTGGGCGTAAAAAAAGAAATGCCCAAGCTGCAGCTTCAACAACAGAAGCACCAACTACGGCAACTCCCACAGGAATGGAACTTGAATTACCAGTTGATCCAAATGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCAAAAGGAAAATGGTACTGTTCAGATTGTGCCGGCTCCAAAGGTCGCCGAAAAGGCAGATGA MSFLEEFQANLESLPNILQKKYALLHDLDQSLQGLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGTAAATGLPASSVDGNTKSGRGTEGGRGGRKKRNAQAAASTTEAPTTATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCSDCAGSKGRRKGR Homology
BLAST of MELO3C006348.jh1 vs. NCBI nr
Match: XP_008438417.1 (PREDICTED: PHD finger protein ING1 [Cucumis melo] >XP_008438418.1 PREDICTED: PHD finger protein ING1 [Cucumis melo] >XP_008438419.1 PREDICTED: PHD finger protein ING1 [Cucumis melo] >XP_008438420.1 PREDICTED: PHD finger protein ING1 [Cucumis melo]) HSP 1 Score: 482 bits (1240), Expect = 1.23e-171 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. NCBI nr
Match: XP_004134022.1 (PHD finger protein ING1 isoform X1 [Cucumis sativus] >XP_011650897.1 PHD finger protein ING1 isoform X1 [Cucumis sativus] >XP_011650899.1 PHD finger protein ING1 isoform X1 [Cucumis sativus] >KGN56782.1 hypothetical protein Csa_009683 [Cucumis sativus]) HSP 1 Score: 474 bits (1219), Expect = 1.95e-168 Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. NCBI nr
Match: XP_038875360.1 (PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875369.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875377.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875386.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida] >XP_038875393.1 PHD finger protein ING1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 460 bits (1184), Expect = 4.55e-163 Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. NCBI nr
Match: XP_023539868.1 (PHD finger protein ING1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 451 bits (1160), Expect = 2.15e-159 Identity = 228/242 (94.21%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. NCBI nr
Match: XP_022944129.1 (PHD finger protein ING1 [Cucurbita moschata] >XP_022944213.1 PHD finger protein ING1 [Cucurbita moschata] >XP_022944294.1 PHD finger protein ING1 [Cucurbita moschata] >KAG6597320.1 PHD finger protein ING1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 450 bits (1157), Expect = 6.16e-159 Identity = 227/242 (93.80%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy Swiss-Prot
Match: Q9LIQ6 (PHD finger protein ING1 OS=Arabidopsis thaliana OX=3702 GN=ING1 PE=1 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.1e-87 Identity = 165/239 (69.04%), Postives = 191/239 (79.92%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy Swiss-Prot
Match: Q5ZKY4 (Inhibitor of growth protein 4 OS=Gallus gallus OX=9031 GN=ING4 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 7.7e-36 Identity = 93/260 (35.77%), Postives = 143/260 (55.00%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy Swiss-Prot
Match: Q9UNL4 (Inhibitor of growth protein 4 OS=Homo sapiens OX=9606 GN=ING4 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34 Identity = 91/260 (35.00%), Postives = 142/260 (54.62%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy Swiss-Prot
Match: Q8C0D7 (Inhibitor of growth protein 4 OS=Mus musculus OX=10090 GN=Ing4 PE=1 SV=2) HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34 Identity = 91/260 (35.00%), Postives = 142/260 (54.62%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy Swiss-Prot
Match: Q8WYH8 (Inhibitor of growth protein 5 OS=Homo sapiens OX=9606 GN=ING5 PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34 Identity = 88/247 (35.63%), Postives = 135/247 (54.66%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AWY6 (PHD finger protein ING OS=Cucumis melo OX=3656 GN=LOC103483518 PE=3 SV=1) HSP 1 Score: 482 bits (1240), Expect = 5.93e-172 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L831 (PHD finger protein ING OS=Cucumis sativus OX=3659 GN=Csa_3G133330 PE=3 SV=1) HSP 1 Score: 474 bits (1219), Expect = 9.45e-169 Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FWG2 (PHD finger protein ING OS=Cucurbita moschata OX=3662 GN=LOC111448643 PE=3 SV=1) HSP 1 Score: 450 bits (1157), Expect = 2.98e-159 Identity = 227/242 (93.80%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IBH6 (PHD finger protein ING OS=Cucurbita maxima OX=3661 GN=LOC111473163 PE=3 SV=1) HSP 1 Score: 446 bits (1148), Expect = 7.02e-158 Identity = 226/242 (93.39%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DZM6 (PHD finger protein ING OS=Momordica charantia OX=3673 GN=LOC111024558 PE=3 SV=1) HSP 1 Score: 444 bits (1141), Expect = 7.35e-157 Identity = 221/239 (92.47%), Postives = 226/239 (94.56%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. TAIR 10
Match: AT3G24010.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 324.3 bits (830), Expect = 8.1e-89 Identity = 165/239 (69.04%), Postives = 191/239 (79.92%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. TAIR 10
Match: AT1G54390.4 (PHD finger protein-related ) HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27 Identity = 80/250 (32.00%), Postives = 125/250 (50.00%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. TAIR 10
Match: AT1G54390.3 (PHD finger protein-related ) HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27 Identity = 80/250 (32.00%), Postives = 125/250 (50.00%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. TAIR 10
Match: AT1G54390.5 (PHD finger protein-related ) HSP 1 Score: 112.5 bits (280), Expect = 4.8e-25 Identity = 76/222 (34.23%), Postives = 112/222 (50.45%), Query Frame = 0
BLAST of MELO3C006348.jh1 vs. TAIR 10
Match: AT1G54390.6 (PHD finger protein-related ) HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23 Identity = 68/174 (39.08%), Postives = 93/174 (53.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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