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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonstart_codonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TGCACGCTTCCTCTTCTTTGGGAATAGCTCAACAGCAACTGAAAGAGCTTCGATAATAGATTGCAGCAATTGAGGCTACCTAGAGACGACATCCAACATTGTACCAATGTATTATGAGAATCCGGTAACCTCGTTCCCTACTTTATCCTCTTCCTATGTGAATGCTAGTCTAACACACTTGGAGCTATTGTCCAGTCAGGTATACCTCAGGCCTTTAGTTTCATTAGTATTG mRNA sequence TGCACGCTTCCTCTTCTTTGGGAATAGCTCAACAGCAACTGAAAGAGCTTCGATAATAGATTGCAGCAATTGAGGCTACCTAGAGACGACATCCAACATTGTACCAATGTATTATGAGAATCCGGTAACCTCGTTCCCTACTTTATCCTCTTCCTATGTGAATGCTAGTCTAACACACTTGGAGCTATTGTCCAGTCAGGTATACCTCAGGCCTTTAGTTTCATTAGTATTG Coding sequence (CDS) ATGTATTATGAGAATCCGGTAACCTCGTTCCCTACTTTATCCTCTTCCTATGTGAATGCTAGTCTAACACACTTGGAGCTATTGTCCAGTCAGGTATACCTCAGGCCTTTAGTTTCATTAGTATTG Protein sequence MYYENPVTSFPTLSSSYVNASLTHLELLSSQVYLRPLVSLVL
Homology
BLAST of MELO.jh018739.1.t1 vs. NCBI nr
Match: KAA0041353.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 1.99e-10 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
MYYENPVTSFPTLSSSYVNASLTHLELLSSQV
Sbjct: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
BLAST of MELO.jh018739.1.t1 vs. NCBI nr
Match: TYK26807.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 1.99e-10 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
MYYENPVTSFPTLSSSYVNASLTHLELLSSQV
Sbjct: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
BLAST of MELO.jh018739.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DSR2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G001200 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.65e-11 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
MYYENPVTSFPTLSSSYVNASLTHLELLSSQV
Sbjct: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
BLAST of MELO.jh018739.1.t1 vs. ExPASy TrEMBL
Match: A0A5A7TDX0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G003640 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.65e-11 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
MYYENPVTSFPTLSSSYVNASLTHLELLSSQV
Sbjct: 1 MYYENPVTSFPTLSSSYVNASLTHLELLSSQV 32
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0041353.1 | 1.99e-10 | 100.00 | Beta-galactosidase [Cucumis melo var. makuwa] | [more] |
| TYK26807.1 | 1.99e-10 | 100.00 | Beta-galactosidase [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DSR2 | 9.65e-11 | 100.00 | Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G0... | [more] |
| A0A5A7TDX0 | 9.65e-11 | 100.00 | Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO.jh018739.1.t1.exon | MELO.jh018739.1.t1.exon | exon |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO.jh018739.1.t1.start_codon | MELO.jh018739.1.t1.start_codon | start_codon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO.jh018739.1.t1.cds | MELO.jh018739.1.t1.cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO.jh018739.1.t1 | MELO.jh018739.1.t1-protein | polypeptide |
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