MC11g_new0062.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0062.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 1898652 .. 1899560 (+)
Sequence length	246
RNA-Seq Expression	MC11g_new0062.1
Synteny	MC11g_new0062.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGGGACAGAAAGATCCAAAATTAGGGAGTAATGGGCCACGTTTTGGATGTAGTTGTTAAGAACAGTAGTACCAGCTCGTATCTCAAGTATCTCAAAGAATGGTATGATATTGTCCACTTCAGACATAATCCTCCTGACTTTACTTTTTGCTTTACCTAAAATACTTCATACCCATGGAGATAATATCATAACCCTGCTTTTCTCTAGCTAATGTAAGACTTTGTTTGTATTATCCTTACAGATCCAACAGGCGGTTTGATATGATATGTTTGAGTGTGCTAATGGAGGGGATACTGGAGCGAGCTGAATTAGAGAAAATTGTTGAATTCGAAGCCGATTGGCTGTCGTGCCTCGTAAACCAATAGGAAACTGTTTAAGCTGGAACTTTTGGGAGGCATAGTCCAATATCCTGATCCGGTCATAGTTAGGGCATTTCCCAAGAGTAAGAGTTCAATGGCATGGCGTTGAGAGCACGGCACGCCATTTTCCACGGCGGCGGTATAGGCTGTCCTCGAGGCCCGGGGGCTAAGAGATATATAACAAATTCAGTTCAACCATTTTGTGTCGGTGGGCAGTCCTTCAAATCCCTCCGTTGGCGCCGTACACAAGAATTGGGGATTGTAATTCACGTTAGGGTTTGTAGCAGAAGCAAGATGCATGATTTAATGCTAGGTTCAATGTTGACATCTATTTTGTTAGACTAATTGCAATTTAATTTTTTTAGGGAAAAAATAATAATTTCCATTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGACAATGGATTATTGATTAATTGCAATTTAATTATTCTATGTACCTTTTAAAAATTTGGATTTGATCTCTATAGTTTGAGACAAATTATACCCCATTATCAACAT

mRNA sequence

ATGGCGTTGAGAGCACGGCACGCCATTTTCCACGGCGGCGGTATAGGCTGTCCTCGAGGCCCGGGGGCTAAGAGATATATAACAAATTCAGTTCAACCATTTTGTGTCGGTGGGCAGTCCTTCAAATCCCTCCGTTGGCGCCGTACACAAGAATTGGGGATTGTAATTCACGTTAGGGTTTGTAGCAGAAGCAAGATGCATGATTTAATGCTAGGTTCAATGTTGACATCTATTTTGTTAGACTAA

Coding sequence (CDS)

ATGGCGTTGAGAGCACGGCACGCCATTTTCCACGGCGGCGGTATAGGCTGTCCTCGAGGCCCGGGGGCTAAGAGATATATAACAAATTCAGTTCAACCATTTTGTGTCGGTGGGCAGTCCTTCAAATCCCTCCGTTGGCGCCGTACACAAGAATTGGGGATTGTAATTCACGTTAGGGTTTGTAGCAGAAGCAAGATGCATGATTTAATGCTAGGTTCAATGTTGACATCTATTTTGTTAGACTAA

Protein sequence

MALRARHAIFHGGGIGCPRGPGAKRYITNSVQPFCVGGQSFKSLRWRRTQELGIVIHVRVCSRSKMHDLMLGSMLTSILLD

Homology

The following BLAST results are available for this feature:

BLAST of MC11g_new0062.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0062.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0062.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0062.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..17 score: 6.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g_new0062	MC11g_new0062	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g_new0062.1-cds	MC11g_new0062.1-cds-MC11:1899112..1899357	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g_new0062.1	MC11g_new0062.1-protein	polypeptide