MC11g1061.1 (mRNA) Bitter gourd (Dali-11) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGGACAAGCACGGGGTTTGCTCAGAGATTTATTTGAATCAAGAAGAGTACTTTAAAATGTCCATTATTATGATTGATGGTCTCGACCTTCTTGTTACCCTCACACATGCTGGGATATGGGACAAGCACGGGGTTTGCTCAGAGATTTATTTGAATCAAGAAGAGTACTTTAAAATGTCCATTATTATGATTGATGGTCTCGACCTTCTTGTTACCCTCACACATGCTGGGATA TGGGACAAGCACGGGGTTTGCTCAGAGATTTATTTGAATCAAGAAGAGTACTTTAAAATGTCCATTATTATGATTGATGGTCTCGACCTTCTTGTTACCCTCACACATGCTGGGATA WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI Homology
BLAST of MC11g1061.1 vs. NCBI nr
Match: XP_027098404.1 (extracellular ribonuclease LE-like [Coffea arabica] >XP_027154472.1 extracellular ribonuclease LE-like [Coffea eugenioides]) HSP 1 Score: 47.0 bits (110), Expect = 1.99e-04 Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. NCBI nr
Match: XP_027096342.1 (extracellular ribonuclease LE-like [Coffea arabica]) HSP 1 Score: 45.4 bits (106), Expect = 7.22e-04 Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. NCBI nr
Match: CDP00339.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 45.4 bits (106), Expect = 7.22e-04 Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. NCBI nr
Match: CAA7031175.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 45.4 bits (106), Expect = 7.34e-04 Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of MC11g1061.1 vs. NCBI nr
Match: QHO42227.1 (Ribonuclease [Arachis hypogaea] >RYR58486.1 hypothetical protein Ahy_A05g024275 [Arachis hypogaea]) HSP 1 Score: 44.7 bits (104), Expect = 9.15e-04 Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. ExPASy TrEMBL
Match: A0A6P6V5Z3 (extracellular ribonuclease LE-like OS=Coffea arabica OX=13443 GN=LOC113717791 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 9.63e-05 Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. ExPASy TrEMBL
Match: A0A068TWK7 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00032247001 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.50e-04 Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. ExPASy TrEMBL
Match: A0A6P6V396 (extracellular ribonuclease LE-like OS=Coffea arabica OX=13443 GN=LOC113716247 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.50e-04 Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. ExPASy TrEMBL
Match: A0A6D2IVD9 (Ribonuclease T(2) OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS18410 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.56e-04 Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of MC11g1061.1 vs. ExPASy TrEMBL
Match: A0A445D5I3 (Ribonuclease T(2) OS=Arachis hypogaea OX=3818 GN=Ahy_A05g024275 PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 4.43e-04 Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 42.0 bits (97), Expect = 1.3e-04 Identity = 18/39 (46.15%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of MC11g1061.1 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 40.4 bits (93), Expect = 3.8e-04 Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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