MC11g1017.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1017.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	AAI domain-containing protein
Location	MC11: 8700861 .. 8701145 (+)
Sequence length	285
RNA-Seq Expression	MC11g1017.1
Synteny	MC11g1017.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCTGTTCTGTTCTTGGCTCTGCTTCTGTCCGGCGCCGAGGCGTCCCCCTTGTGCAAGATCGACACCAAGGACCTCGCCGTGTGCCGGCCCGCGGTGACCACGGTCCCGGGCCAACCGCTGCCGCTGCCGACCGAGGCCTGCTGCGGAGTGGTCCATCGGGCCGACCTCAAGTGTCTCTGCAACCTCAAGTCTCTCCTCCCGGCCGTCGGGATCGATACTGCTAATGCTATGGCATTGCCCCCCAAATGTGGCATCCAAGCCCCACCCGAGTGTCATGTT

mRNA sequence

ATGGTGGCTGTTCTGTTCTTGGCTCTGCTTCTGTCCGGCGCCGAGGCGTCCCCCTTGTGCAAGATCGACACCAAGGACCTCGCCGTGTGCCGGCCCGCGGTGACCACGGTCCCGGGCCAACCGCTGCCGCTGCCGACCGAGGCCTGCTGCGGAGTGGTCCATCGGGCCGACCTCAAGTGTCTCTGCAACCTCAAGTCTCTCCTCCCGGCCGTCGGGATCGATACTGCTAATGCTATGGCATTGCCCCCCAAATGTGGCATCCAAGCCCCACCCGAGTGTCATGTT

Coding sequence (CDS)

ATGGTGGCTGTTCTGTTCTTGGCTCTGCTTCTGTCCGGCGCCGAGGCGTCCCCCTTGTGCAAGATCGACACCAAGGACCTCGCCGTGTGCCGGCCCGCGGTGACCACGGTCCCGGGCCAACCGCTGCCGCTGCCGACCGAGGCCTGCTGCGGAGTGGTCCATCGGGCCGACCTCAAGTGTCTCTGCAACCTCAAGTCTCTCCTCCCGGCCGTCGGGATCGATACTGCTAATGCTATGGCATTGCCCCCCAAATGTGGCATCCAAGCCCCACCCGAGTGTCATGTT

Protein sequence

MVAVLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCNLKSLLPAVGIDTANAMALPPKCGIQAPPECHV

Homology

[Close]

BLAST of MC11g1017.1 vs. NCBI nr
Match: KAG7037349.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (364), Expect = 1.11e-42
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1   MVAVLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVP-GQPLPLPTEACCGVVHRADLK 60
           +VA LFL + + G  ASPLCKIDT DL VCRPAVTT   GQPLPLPTE CC VV RADLK
Sbjct: 7   LVAALFL-IAVGGVLASPLCKIDTTDLGVCRPAVTTPEHGQPLPLPTEGCCAVVRRADLK 66

Query: 61  CLCNLKSLLPAVGIDTANAMALPPKCGIQAPPECHV 95
           CLCNLKS+LPA+GID ANAMALP KCG+  PPECH+
Sbjct: 67  CLCNLKSMLPAIGIDAANAMALPGKCGLSIPPECHL 101

[Close]

BLAST of MC11g1017.1 vs. NCBI nr
Match: KAG6607773.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125 bits (315), Expect = 2.98e-35
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 3  AVLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLC 62
          A L  +L L G  A+PLC++DTK+L +C+PAV    GQPL  PT+ CC VV RADLKCLC
Sbjct: 6  ASLLFSLFLVGTIATPLCRVDTKELKMCQPAVAPPHGQPLQPPTKGCCSVVRRADLKCLC 65

Query: 63 NLKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
          +LKS+LP +GI+TANA+ALP KCGI  PPEC 
Sbjct: 66 SLKSVLPTIGINTANALALPSKCGIHTPPECR 97

[Close]

BLAST of MC11g1017.1 vs. NCBI nr
Match: KAG7037350.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125 bits (313), Expect = 6.77e-35
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 3   AVLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLC 62
           A L  +L L G  A+PLC++DTK+L +C+PAV    GQ L  PT+ CC VV RADLKCLC
Sbjct: 10  ASLLFSLFLVGTIATPLCRVDTKELKMCQPAVAPPHGQLLQPPTKGCCSVVRRADLKCLC 69

Query: 63  NLKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
           +LKS+LP +GI+TANA+ALP KCGI  PPECH
Sbjct: 70  SLKSVLPTIGINTANALALPSKCGIHTPPECH 101

[Close]

BLAST of MC11g1017.1 vs. NCBI nr
Match: XP_008447695.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo] >KAA0048163.1 putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 9.90e-35
Identity = 62/92 (67.39%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 5   LFLALLLSGA-EASPLCKIDTKDLAVCRPAVTTVP-GQPLPLPTEACCGVVHRADLKCLC 64
           L L LLL+GA  +SPLC+IDT DL VCRPAVT    G+ LPLPT+ACC VV RADLKCLC
Sbjct: 11  LLLVLLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSVVRRADLKCLC 70

Query: 65  NLKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
           +LK  LP+ GI+TANA+ALP KCG+  PPEC 
Sbjct: 71  SLKYALPSFGINTANALALPSKCGVSPPPECR 102

[Close]

BLAST of MC11g1017.1 vs. NCBI nr
Match: XP_038896217.1 (putative lipid-transfer protein DIR1 [Benincasa hispida])

HSP 1 Score: 124 bits (310), Expect = 2.39e-34
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 5   LFLALLLSGAEASPLCKIDTKDLAV-CRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCN 64
           LFLA+LL G  A+ LCK+DTK+L V CRPAV  + G+PL  PT+ CC V+  ADLKCLCN
Sbjct: 17  LFLAILLVGISATLLCKVDTKELCVNCRPAVAPLHGKPLQPPTKHCCSVIRHADLKCLCN 76

Query: 65  LKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
            KS+LP+VGI+T  A+ALP KCGI  PPECH
Sbjct: 77  FKSILPSVGINTTIALALPSKCGINTPPECH 107

[Close]

BLAST of MC11g1017.1 vs. ExPASy TrEMBL
Match: A0A0A0LAS6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 2.04e-36
Identity = 61/91 (67.03%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 5   LFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVP-GQPLPLPTEACCGVVHRADLKCLCN 64
           L + LL +   A PLCKIDT DL +CR AVT    GQPLPLPTE CC VV  ADLKCLCN
Sbjct: 12  LLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCN 71

Query: 65  LKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
           LKS+LP++GIDTANA+ALP KC + +PPECH
Sbjct: 72  LKSVLPSMGIDTANALALPSKCNVASPPECH 102

[Close]

BLAST of MC11g1017.1 vs. ExPASy TrEMBL
Match: A0A5A7TX28 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00630 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 4.79e-35
Identity = 62/92 (67.39%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 5   LFLALLLSGA-EASPLCKIDTKDLAVCRPAVTTVP-GQPLPLPTEACCGVVHRADLKCLC 64
           L L LLL+GA  +SPLC+IDT DL VCRPAVT    G+ LPLPT+ACC VV RADLKCLC
Sbjct: 11  LLLVLLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSVVRRADLKCLC 70

Query: 65  NLKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
           +LK  LP+ GI+TANA+ALP KCG+  PPEC 
Sbjct: 71  SLKYALPSFGINTANALALPSKCGVSPPPECR 102

[Close]

BLAST of MC11g1017.1 vs. ExPASy TrEMBL
Match: A0A1S3BHE7 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 4.79e-35
Identity = 62/92 (67.39%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 5   LFLALLLSGA-EASPLCKIDTKDLAVCRPAVTTVP-GQPLPLPTEACCGVVHRADLKCLC 64
           L L LLL+GA  +SPLC+IDT DL VCRPAVT    G+ LPLPT+ACC VV RADLKCLC
Sbjct: 11  LLLVLLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSVVRRADLKCLC 70

Query: 65  NLKSLLPAVGIDTANAMALPPKCGIQAPPECH 94
           +LK  LP+ GI+TANA+ALP KCG+  PPEC 
Sbjct: 71  SLKYALPSFGINTANALALPSKCGVSPPPECR 102

[Close]

BLAST of MC11g1017.1 vs. ExPASy TrEMBL
Match: A0A0A0LBB0 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 5.15e-33
Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 5   LFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCNL 64
           LFL ++L+   A+ LCK+DTK+L VCRPAV  + G+PL  PTE CC V+  ADLKCLCNL
Sbjct: 17  LFLVMVLAETTATLLCKVDTKELCVCRPAVAPLHGKPLQPPTERCCSVLRSADLKCLCNL 76

Query: 65  KSLLPAVGIDTANAMALPPKCGIQAPPECH 94
           KS+LP+ GI+   A+ALP KCGI +PPEC 
Sbjct: 77  KSILPSAGINATIALALPSKCGIPSPPECR 106

[Close]

BLAST of MC11g1017.1 vs. ExPASy TrEMBL
Match: A0A5A7TY68 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00600 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 2.35e-32
Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 9  LLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCNLKSLL 68
          ++L+G  A+ LCK+DTK L VCRPAV  + G+PL  PT+ CC VV  ADLKCLCNLKS+L
Sbjct: 1  MVLAGTSATLLCKVDTKKLCVCRPAVAPLHGKPLQPPTKRCCSVVRSADLKCLCNLKSIL 60

Query: 69 PAVGIDTANAMALPPKCGIQAPPECH 94
          P+ GI+   A+ALP KCGI+ PPEC 
Sbjct: 61 PSAGINATIALALPSKCGIRTPPECR 86

[Close]

BLAST of MC11g1017.1 vs. TAIR 10
Match: AT5G55450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 4.4e-14
Identity = 40/90 (44.44%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 1   MVAVLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKC 60
           +  VL  A+++  A + P+C IDT DLA CRPAVT   G   P P   CC V   A+L+C
Sbjct: 15  LAMVLTAAIMVKEATSIPVCNIDTNDLAKCRPAVT---GNNPPPPGPDCCAVARVANLQC 74

Query: 61  LCNLKSLLPAVGIDTANAMALPPKCGIQAP 91
           LC  K  LP VGID +    L   CG+ +P
Sbjct: 75  LCPYKPYLPTVGIDPSRVRPLLANCGVNSP 101

[Close]

BLAST of MC11g1017.1 vs. TAIR 10
Match: AT5G55410.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.2e-12
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 4   VLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCN 63
           VL  A+++  A +  +C +D  D+  CRPA+T   G   P P   CC VV +A+ +CLC 
Sbjct: 18  VLTFAMMVKEATSMSICDMDINDMQKCRPAIT---GNNPPPPVNDCCVVVRKANFECLCR 77

Query: 64  LKSLLPAVGIDTANAMALPPKCGI-QAPPECHV 96
            K  LP + ID +  +AL  KCG+   P  C V
Sbjct: 78  FKFYLPILRIDPSKVVALVAKCGVTTVPRSCQV 107

[Close]

BLAST of MC11g1017.1 vs. TAIR 10
Match: AT5G55410.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-12
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 4   VLFLALLLSGAEASPLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCN 63
           VL  A+++  A +  +C +D  D+  CRPA+T   G   P P   CC VV +A+ +CLC 
Sbjct: 18  VLTFAMMVKEATSMSICDMDINDMQKCRPAIT---GNNPPPPVNDCCVVVRKANFECLCR 77

Query: 64  LKSLLPAVGIDTANAMALPPKCGIQAPP 92
            K  LP + ID +  +AL  KCG+   P
Sbjct: 78  FKFYLPILRIDPSKVVALVAKCGVTTVP 102

[Close]

BLAST of MC11g1017.1 vs. TAIR 10
Match: AT5G55460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 2   VAVLFLALLLSGAEAS-PLCKIDTKDLAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKC 61
           +A++  AL+L     S   C I+   L  CRPAV    G   P P + CC ++  A+LKC
Sbjct: 14  LAIVLAALVLMEEPTSITACNINANHLEKCRPAVI---GDNPPSPIKECCELLQAANLKC 73

Query: 62  LCNLKSLLPAVGIDTANAMALPPKCGIQA-PPEC 94
           +C  KS+LP + +  +   AL  KCG+   PP C
Sbjct: 74  ICRFKSVLPVLAVYPSKVQALLSKCGLTTIPPAC 104

[Close]

BLAST of MC11g1017.1 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 5.8e-06
Identity = 28/65 (43.08%), Postives = 33/65 (50.77%), Query Frame = 0


Query: 27  LAVCRPAVTTVPGQPLPLPTEACCGVVHRADLKCLCNLKSLLPAVGIDTANAMALPPKCG 86
           L  CR AV   P  P+P PTE CC  V      CLC L +  P  GID + A+ LP +C 
Sbjct: 59  LIPCRAAV--APFSPIP-PTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMALQLPQRCS 118

Query: 87  IQAPP 92
              PP
Sbjct: 119 ANFPP 120

The following BLAST results are available for this feature:

BLAST of MC11g1017.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1017.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037349.1	1.11e-42	73.96	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAG6607773.1	2.98e-35	61.96	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]
KAG7037350.1	6.77e-35	61.96	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_008447695.1	9.90e-35	67.39	PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo] >KAA0048163.1 put...	[more]
XP_038896217.1	2.39e-34	63.74	putative lipid-transfer protein DIR1 [Benincasa hispida]	[more]

BLAST of MC11g1017.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAS6	2.04e-36	67.03	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV...	[more]
A0A5A7TX28	4.79e-35	67.39	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BHE7	4.79e-35	67.39	putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=...	[more]
A0A0A0LBB0	5.15e-33	60.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV...	[more]
A0A5A7TY68	2.35e-32	60.47	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of MC11g1017.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55450.1	4.4e-14	44.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.1	4.2e-12	38.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.2	7.1e-12	38.64	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55460.1	1.1e-09	37.23	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G52130.1	5.8e-06	43.08	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 20..93 e-value: 0.0024 score: 27.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..93 e-value: 2.4E-8 score: 34.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 17..93 e-value: 9.5E-16 score: 59.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 20..93
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 2..94
None	No IPR available	PANTHER	PTHR33122:SF43	LIPID TRANSFER PROTEIN	coord: 2..94
IPR044741	Non-specific lipid-transfer protein-like	CDD	cd04660	nsLTP_like	coord: 20..91 e-value: 1.08315E-13 score: 58.5346

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g1017	MC11g1017	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1017.1-cds	MC11g1017.1-cds-MC11:8700861..8701145	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g1017.1	MC11g1017.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding