MC11g0204.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0204.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	myb domain protein 77
Location	MC11: 1631856 .. 1632167 (-)
Sequence length	312
RNA-Seq Expression	MC11g0204.1
Synteny	MC11g0204.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAAATCAAGGGCCCATGGAGCGCCGAAGAGGATCGGATCCTGACCCGACTCGTCGAGCGTTACGGCCCGAGGAATTGGTCCTTGATTAGCCGTTATGTAAAGGGGCGGTCGGGGAAATCGTGCCGGCTCCGGTGGTGCAATCAGCTCTGCCCCGGCGTCGAGCACCGCCCCTTCTCTCCAGCCGAGGATGACGCCATCATCGCCGCCCACGCCCGCTACGGAAACCGGTGGGCCACCATTGCCCGCTTGCTGCCCGGTCGGACGGACAATGCCGTCAAGAATCACTGGAACTCCACGCTCAAGCGCCGA

mRNA sequence

GATAAAATCAAGGGCCCATGGAGCGCCGAAGAGGATCGGATCCTGACCCGACTCGTCGAGCGTTACGGCCCGAGGAATTGGTCCTTGATTAGCCGTTATGTAAAGGGGCGGTCGGGGAAATCGTGCCGGCTCCGGTGGTGCAATCAGCTCTGCCCCGGCGTCGAGCACCGCCCCTTCTCTCCAGCCGAGGATGACGCCATCATCGCCGCCCACGCCCGCTACGGAAACCGGTGGGCCACCATTGCCCGCTTGCTGCCCGGTCGGACGGACAATGCCGTCAAGAATCACTGGAACTCCACGCTCAAGCGCCGA

Coding sequence (CDS)

GATAAAATCAAGGGCCCATGGAGCGCCGAAGAGGATCGGATCCTGACCCGACTCGTCGAGCGTTACGGCCCGAGGAATTGGTCCTTGATTAGCCGTTATGTAAAGGGGCGGTCGGGGAAATCGTGCCGGCTCCGGTGGTGCAATCAGCTCTGCCCCGGCGTCGAGCACCGCCCCTTCTCTCCAGCCGAGGATGACGCCATCATCGCCGCCCACGCCCGCTACGGAAACCGGTGGGCCACCATTGCCCGCTTGCTGCCCGGTCGGACGGACAATGCCGTCAAGAATCACTGGAACTCCACGCTCAAGCGCCGA

Protein sequence

DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR

Homology

[Close]

BLAST of MC11g0204.1 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 8.9e-45
Identity = 78/104 (75.00%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           D++KGPWS EED  L R+VE+YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
           P ED+ I+ A A++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC11g0204.1 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.8e-44
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           ++IKGPWS EED +L RLV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
             ED+ II AHAR+GN+WATI+RLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of MC11g0204.1 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-43
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           D+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
             ED+ I  AHA++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC11g0204.1 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.6e-39
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           D++KGPWS EED +L+ LV+R G RNWS I+R + GRSGKSCRLRWCNQL P +    F+
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
             ED AIIAAHA +GN+WA IA+LLPGRTDNA+KNHWNS L+RR
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRR 155

[Close]

BLAST of MC11g0204.1 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-36
Identity = 66/103 (64.08%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 2   KIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSP 61
           K+KGPW  E+D  LTRLV+  GPRNW+LISR + GRSGKSCRLRWCNQL P ++ +PFS 
Sbjct: 48  KVKGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGRSGKSCRLRWCNQLDPILKRKPFSD 107

Query: 62  AEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
            E+  I++A A  GN+W+ IA+LLPGRTDNA+KNHWNS L+R+
Sbjct: 108 EEEHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHWNSNLRRK 150

[Close]

BLAST of MC11g0204.1 vs. NCBI nr
Match: XP_022139700.1 (transcription factor MYB44-like [Momordica charantia])

HSP 1 Score: 226 bits (576), Expect = 8.01e-73
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 44  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 103

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 104 PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 147

[Close]

BLAST of MC11g0204.1 vs. NCBI nr
Match: XP_023525388.1 (transcription factor MYB44-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (572), Expect = 1.76e-72
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 36  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 95

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 96  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 139

[Close]

BLAST of MC11g0204.1 vs. NCBI nr
Match: KAG6608498.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037824.1 Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224 bits (572), Expect = 1.76e-72
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 36  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 95

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 96  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 139

[Close]

BLAST of MC11g0204.1 vs. NCBI nr
Match: XP_022941049.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 224 bits (572), Expect = 1.76e-72
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 36  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 95

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 96  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 139

[Close]

BLAST of MC11g0204.1 vs. NCBI nr
Match: XP_008452503.1 (PREDICTED: transcriptional activator Myb-like [Cucumis melo] >KAA0064358.1 transcriptional activator Myb-like [Cucumis melo var. makuwa] >TYK20229.1 transcriptional activator Myb-like [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (572), Expect = 1.82e-72
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 35  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 94

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 95  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 138

[Close]

BLAST of MC11g0204.1 vs. ExPASy TrEMBL
Match: A0A6J1CD16 (transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111010546 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 3.88e-73
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 44  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 103

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 104 PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 147

[Close]

BLAST of MC11g0204.1 vs. ExPASy TrEMBL
Match: A0A6J1FM32 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111446453 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 8.54e-73
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 36  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 95

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 96  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 139

[Close]

BLAST of MC11g0204.1 vs. ExPASy TrEMBL
Match: A0A5A7V9U0 (Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003670 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 8.82e-73
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 35  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 94

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 95  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 138

[Close]

BLAST of MC11g0204.1 vs. ExPASy TrEMBL
Match: A0A1S3BV53 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 8.82e-73
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 35  DKIKGPWSAEEDRVLTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 94

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 95  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 138

[Close]

BLAST of MC11g0204.1 vs. ExPASy TrEMBL
Match: A0A0A0L4S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638510 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 9.72e-73
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS
Sbjct: 35  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 94

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 104
           PAEDDAI+AAH+RYGNRWATIARLLPGRTDNAVKNHWNSTLKRR
Sbjct: 95  PAEDDAIVAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 138

[Close]

BLAST of MC11g0204.1 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 180.6 bits (457), Expect = 6.3e-46
Identity = 78/104 (75.00%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           D++KGPWS EED  L R+VE+YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
           P ED+ I+ A A++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC11g0204.1 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 177.6 bits (449), Expect = 5.3e-45
Identity = 78/104 (75.00%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           D+IKGPWS EED +L  LV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR F+
Sbjct: 10  DRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFT 69

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
             EDD II AHAR+GN+WATIARLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  AEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of MC11g0204.1 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 177.2 bits (448), Expect = 7.0e-45
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           ++IKGPWS EED +L RLV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
             ED+ II AHAR+GN+WATI+RLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of MC11g0204.1 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 176.8 bits (447), Expect = 9.1e-45
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFS 60
           D+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 61  PAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
             ED+ I  AHA++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC11g0204.1 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 164.9 bits (416), Expect = 3.6e-41
Identity = 71/103 (68.93%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 2   KIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSP 61
           K+KGPWS EED +LT+LV + GPRNWSLI+R + GRSGKSCRLRWCNQL P ++ +PFS 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 62  AEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 105
            ED  II+AHA +GN+WA IA+LL GRTDNA+KNHWNSTL+R+
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRK 156

The following BLAST results are available for this feature:

BLAST of MC11g0204.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN12	8.9e-45	75.00	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
O23160	9.8e-44	74.04	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9FDW1	1.3e-43	75.00	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
Q42575	5.6e-39	67.31	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	2.0e-36	64.08	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of MC11g0204.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139700.1	8.01e-73	100.00	transcription factor MYB44-like [Momordica charantia]	[more]
XP_023525388.1	1.76e-72	98.08	transcription factor MYB44-like [Cucurbita pepo subsp. pepo]	[more]
KAG6608498.1	1.76e-72	98.08	Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022941049.1	1.76e-72	98.08	transcription factor MYB44-like [Cucurbita moschata]	[more]
XP_008452503.1	1.82e-72	98.08	PREDICTED: transcriptional activator Myb-like [Cucumis melo] >KAA0064358.1 trans...	[more]

BLAST of MC11g0204.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CD16	3.88e-73	100.00	transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111010546 P...	[more]
A0A6J1FM32	8.54e-73	98.08	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111446453 PE...	[more]
A0A5A7V9U0	8.82e-73	98.08	Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BV53	8.82e-73	98.08	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 ...	[more]
A0A0A0L4S7	9.72e-73	98.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638510 PE=4 SV=1	[more]

BLAST of MC11g0204.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50060.1	6.3e-46	75.00	myb domain protein 77	[more]
AT2G23290.1	5.3e-45	75.00	myb domain protein 70	[more]
AT4G37260.1	7.0e-45	74.04	myb domain protein 73	[more]
AT5G67300.1	9.1e-45	75.00	myb domain protein r1	[more]
AT3G55730.1	3.6e-41	68.93	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 55..103 e-value: 2.5E-15 score: 67.0 coord: 3..52 e-value: 3.5E-15 score: 66.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 51..101 score: 8.954568
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..50 score: 11.880894
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..48 e-value: 2.26376E-15 score: 62.2078
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 58..101 e-value: 7.73039E-12 score: 53.3482
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 58..100 e-value: 1.2E-14 score: 54.2 coord: 4..50 e-value: 1.2E-16 score: 60.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 56..104 score: 23.26346
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..54 score: 28.183571
None	No IPR available	GENE3D	1.10.10.60		coord: 3..55 e-value: 1.6E-22 score: 81.2
None	No IPR available	GENE3D	1.10.10.60		coord: 58..104 e-value: 3.3E-21 score: 76.9
None	No IPR available	PANTHER	PTHR45614:SF53	TRANSCRIPTION FACTOR MYB44-LIKE	coord: 1..104
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..104
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..97

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0204	MC11g0204	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0204.1-cds	MC11g0204.1-cds-MC11:1631856..1632167	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0204.1	MC11g0204.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding