MC09g_new0059.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0059.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	translation machinery-associated protein 7
Location	MC09: 2576884 .. 2579982 (-)
Sequence length	405
RNA-Seq Expression	MC09g_new0059.1
Synteny	MC09g_new0059.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGATGAAGGAACTCAAACCGAAGTTTGGTTGCAGGCAATATCGTGTTCGAGGGATTGTTAAGCTCTGCCGCTGCCATGGGTCTCGGTTTGCGAAGTACCGATTTGACAGTATCCGGCAGAATAGCACTGGATTTTTCTGGTGGATATAAGATATAATATAACAACAAATAAATTACCTGTGAAAATATAAAATAATAATAATAATAATAATAAAAAACTCTTTTTGTAATACAACAAGGAATTTGAACTCACGAGTCGAAAACACGTGCGAATTGCAGTTGAGTTGCTTGGCAATTAAAAAAAATAAATGGAAATCATATTTTTCAATGAACAAAATCAACAATTAATACATAACTTTGTCAACACTTTCCCTCAATGAAAAACTAGCTCTAACGCTAACGCTAATCTCATTTAGATCGCATCAATTTCATATTTATATATATATATATAAATTTTTTTTTTTTTATGTACGAATGTGGTGTGTATATATTTTGAAATTAATTGAAAAACAATATAGATTTATCCAATCATTCATCAAATGAAAACGAATTATAACGTAAGAATTTACGACCCATTTTGAAGTATAAGGTGGAAAATTTAATAGTCATCTACAACTAACATTCAATAGGATGAAATTGTAAATTTAGTGTAAATTTTGATACACCAACAAGTTCAAAGTTAAAATTGTATTTTGTCTGTATAGTTTAATTATGGCTCACAACAACAAATATGGCTACCGCGTATTTAAATCCTTGCCTCCAAAGTCCCTTCCCAAACTTTAATTTAATTATGTTCTACACGGAATATGTTAAGATATATAGAATTTAATGTTTCATTATGGTTTAAATTTTAAATTTATCTAAATTGTGTTGCATATTAAATTAGAACATCCTAGACGTTGTATTAAAAAAAAAAGTCAGCTACTCAAAATTTTAACTAAAAACAATTATTAAATTGTTATATACCTCAAACTATGAGACTGTGCGGTTCGAAAAAAAAAAAAAAAATTCAACAAATTTAGAAAAATGTAAAAGAAATCTCATCTAAAATTATATTGCATCCACTCCACACGATTCCATTTTCTAAAATTAGCTTTCCAACCTAAACCTAATTATAATGTTTAATGGTCAAGGTTTTTTTTCTTTAATTTATAATTTTGGGAGTAAGAAAGTATATAGGTATGTATATAAAATCAAATCACGTTCATAGCACGTGCCAATTATGGTGTCTATAAATGGCAGCCCGTTGTATTATTCCGCGAGCCTTCAATTGCCGCGTACAGGCGATCCCTCTTTGTTCTATTCGACTCGGGCCAAACCCTAGCAAGATCTCAGCCATGTCGTCCAAGCAAGGTACGCTCTATTTCCTCATAGTTATGGTAATTTTAAGCTATCTATTCCGATTTTCTCTTGGATATGGCAGTACCATCGATCGGATTAAAAAACAACTACGCTATGATACAGAACTTTTTTTCATTAATCGTGATTTGGAGAATTGATTGTGTTTTTGCCTTTATAGGAGGGAAAGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAGGAGTACGACGAGGTATACTTGATTTATTATGTTATGGATCCATGCCGCAGATCTATCTTTTATTGGATTCTCTTTTTTAATACAACTTTTAAGATGAAATCGTCTTATCTTCGTTGTTTGCTTGTATGTTCCTGGGTTGAAATCAGGACACTGGATTGTCTGTTGTTAAATCCCATTAACGGAATATATATCATCGAGCGATCTTTGTCTCAAACAAAAGCAGCGATGCATATATAAGGGTAGCTCGATCTAGCTGTTCCGTGTCTAAACGCCAGATATTGTGGCGTATTTGAGAAACTGTTTTGGAAATAGTTTAATTGTCTGTCTTCAACACTCTTTTGAATAACTGTAATCAGATGGCTGGTACAGGTTAATTGATTACTGTACACATTAAGTTACGATTCACATAATCTGTAAGATGGATTTTATTTGAACTTTTTTGCAGTTCTAGATTATGGGTTGCTCTTAATATAGGTCTCAGCATAAGAGTATGATGGAAATATTTCATAAGGAACTTGTCTTCTATGTGGAAGTGTTATACGATTTCTATTTTCTGTTTTCAGTTTTCGATTTACTATTATATCTGATGGTTGGCAAGTGACTTGGTGTTTAGTCTGGCTGTGATTTTTAAAGAATGTTGTTTTGAGCTTGGAAGATTGTTTTCTCAATAGTTATTTGCCTTTGTTCTCAAGTATATTTTTAAGAATTGTAATTGAGTGGCTTGCAAAGGTTAAAGTTATTGTGCACATGAAACCATTATTAACTTCATAGAAAGAACAAATTTAGTAATTTTAAAAAATAGTCTATCTACGGATTAAGGAAAAAAACTAATTGAACAACATTTAGAGAGCAAATTTTCAATCATGTTTTCGTTGAATTTTTAAAATTTTTTTGGTAAGAGCATTCAAACAGCCCCTTGCATTTTGTTTGATAAGTTTTTTCTAATTTTACTTTTCAGTTCCCATGAGGATAACTACATGTCACTTTTATTGAGGAACTGGACACAATTGAAACATTTTATCATGATTTCCCATTAATTTCAATTTTTCTCTTTCCATTTAACAAATTTCCTAGCACTGTTTGCTTGAAGCTAAAAGACTGATATAATATATCATATATTATCTCAAAAGTTAATGAATAATTGAGCACTAGGTTGCAGCTTTTGTGTCTTGTAATCATTACTGCCTTCTATTTGTTTCTTTTCCTATACTTCAAAATCATTTATGTAGTCAGCTAAATAACAAGGCAGTGATAGAAAGGTTTGTATTATTATTTACAAAACTACCTTGTGAATTTTACTGGGTCTTCTTCAATAGGTTGACATGGCCAACATTCAAAAGAAGAAGGATGAGGAAAAGGTGAGAAGTTGAAACAGTAACAAAACCTTTCTTCTGTCCACTGGTTGTGTTGAAGATTGCTACTATAATTTTGAGTTGTTTGACGTTACAGGCTCTCAGGGAGCTAAGAGCTAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

mRNA sequence

ATGTTGAAGATGAAGGAACTCAAACCGAAGTTTGGTTGCAGGCAATATCGTGTTCGAGGGATTGTTAAGCTCTGCCGCTGCCATGGGTCTCGGTTTGCGAAGTACCGATTTGACACCCGTTGTATTATTCCGCGAGCCTTCAATTGCCGCGTACAGGCGATCCCTCTTTGTTCTATTCGACTCGGGCCAAACCCTAGCAAGATCTCAGCCATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAGGAGTACGACGAGGTTGACATGGCCAACATTCAAAAGAAGAAGGATGAGGAAAAGGCTCTCAGGGAGCTAAGAGCTAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

Coding sequence (CDS)

ATGTTGAAGATGAAGGAACTCAAACCGAAGTTTGGTTGCAGGCAATATCGTGTTCGAGGGATTGTTAAGCTCTGCCGCTGCCATGGGTCTCGGTTTGCGAAGTACCGATTTGACACCCGTTGTATTATTCCGCGAGCCTTCAATTGCCGCGTACAGGCGATCCCTCTTTGTTCTATTCGACTCGGGCCAAACCCTAGCAAGATCTCAGCCATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAGGAGTACGACGAGGTTGACATGGCCAACATTCAAAAGAAGAAGGATGAGGAAAAGGCTCTCAGGGAGCTAAGAGCTAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

Protein sequence

MLKMKELKPKFGCRQYRVRGIVKLCRCHGSRFAKYRFDTRCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK

Homology

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy Swiss-Prot
Match: A1A4Q4 (Translation machinery-associated protein 7 OS=Bos taurus OX=9913 GN=TMA7 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.1e-10
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MS ++GGK KPLKQPK   KE DE D A  QK+K+E+K L EL+AKA  KG     G+KK
Sbjct: 1   MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy Swiss-Prot
Match: Q9Y2S6 (Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.1e-10
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MS ++GGK KPLKQPK   KE DE D A  QK+K+E+K L EL+AKA  KG     G+KK
Sbjct: 1   MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy Swiss-Prot
Match: Q8K003 (Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.1e-10
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MS ++GGK KPLKQPK   KE DE D A  QK+K+E+K L EL+AKA  KG     G+KK
Sbjct: 1   MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy Swiss-Prot
Match: Q05AK9 (Translation machinery-associated protein 7 OS=Danio rerio OX=7955 GN=tma7 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MS ++GGK KPLK PK   KE DE +MA  QK+K+++KA+ +L+AKA  KG   G G+KK
Sbjct: 1   MSGREGGKKKPLKAPKKQSKEMDEDEMAFKQKQKEDQKAMEQLKAKAAGKGPLTGGGIKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy Swiss-Prot
Match: Q9XZS3 (Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX=7227 GN=CG13364 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MS ++GGK KPLK PK D K+ DE DMA  QK+K+++KAL   +A A +KG   G G+KK
Sbjct: 1   MSGREGGKKKPLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

[Close]

BLAST of MC09g_new0059.1 vs. NCBI nr
Match: XP_022145738.1 (translation machinery-associated protein 7 [Momordica charantia])

HSP 1 Score: 181 bits (459), Expect = 1.59e-56
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 40  RCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMAN 99
           RCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMAN
Sbjct: 4   RCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMAN 63

Query: 100 IQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 134
           IQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 64  IQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 98

[Close]

BLAST of MC09g_new0059.1 vs. NCBI nr
Match: KAA0049143.1 (F9L1.21 protein [Cucumis melo var. makuwa] >TYK17418.1 F9L1.21 protein [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (351), Expect = 5.55e-40
Identity = 75/84 (89.29%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 52  QAIPLCSI-RLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKAL 111
           +A+PLC + RLGPNPS ISAMSSKQGGKAKPLKQPKVDKK+YDEVDMANIQKKK+EEKAL
Sbjct: 22  RAVPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANIQKKKEEEKAL 81

Query: 112 RELRAKAQQKGTFGGAGLKKSGKK 134
           +ELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 82  KELRAKAQQKGTFGGAGLKKSGKK 105

[Close]

BLAST of MC09g_new0059.1 vs. NCBI nr
Match: KGN56723.1 (hypothetical protein Csa_009747 [Cucumis sativus])

HSP 1 Score: 139 bits (351), Expect = 6.27e-40
Identity = 78/100 (78.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 36  RFDTRCIIPRAFNCRVQAIPLCSI-RLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDE 95
           RF    I+ +      + IPLC + RLGPNPS ISAMSSKQGGKAKPLKQPKVDKK+YDE
Sbjct: 10  RFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDE 69

Query: 96  VDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 134
           VDMAN+QKKKDEEKAL+ELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 70  VDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK 109

[Close]

BLAST of MC09g_new0059.1 vs. NCBI nr
Match: XP_023512250.1 (LOW QUALITY PROTEIN: translation machinery-associated protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131 bits (330), Expect = 8.17e-37
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 41  CIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANI 100
           C   RA +CR +A  LC+IR  PN   +SAMSSKQGGKAKPLKQPKVDKKEYDEVD+AN 
Sbjct: 11  CDTLRAVDCRPRAFLLCAIRFRPNXY-LSAMSSKQGGKAKPLKQPKVDKKEYDEVDLANK 70

Query: 101 QKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 134
           QKKKDEEKALREL+AKAQQKG FGGAGLKKSGKK
Sbjct: 71  QKKKDEEKALRELKAKAQQKGAFGGAGLKKSGKK 103

[Close]

BLAST of MC09g_new0059.1 vs. NCBI nr
Match: XP_022980452.1 (translation machinery-associated protein 7-like [Cucurbita maxima])

HSP 1 Score: 125 bits (314), Expect = 2.08e-34
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 63  PNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGT 122
           PNP+ ISAMSSKQGGKAKPLKQPKV+KK+YDEVDMANIQKKKDEEKALRELRAKAQQKG 
Sbjct: 30  PNPNDISAMSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGA 89

Query: 123 FGGAGLKKSGKK 134
           FGGAGLKKSGKK
Sbjct: 90  FGGAGLKKSGKK 101

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy TrEMBL
Match: A0A6J1CWS4 (translation machinery-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC111015118 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 7.72e-57
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 40  RCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMAN 99
           RCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMAN
Sbjct: 4   RCIIPRAFNCRVQAIPLCSIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMAN 63

Query: 100 IQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 134
           IQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 64  IQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 98

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy TrEMBL
Match: A0A5A7TZV6 (F9L1.21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002810 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 2.69e-40
Identity = 75/84 (89.29%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 52  QAIPLCSI-RLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKAL 111
           +A+PLC + RLGPNPS ISAMSSKQGGKAKPLKQPKVDKK+YDEVDMANIQKKK+EEKAL
Sbjct: 22  RAVPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANIQKKKEEEKAL 81

Query: 112 RELRAKAQQKGTFGGAGLKKSGKK 134
           +ELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 82  KELRAKAQQKGTFGGAGLKKSGKK 105

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy TrEMBL
Match: A0A0A0L4M8 (F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 3.04e-40
Identity = 78/100 (78.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 36  RFDTRCIIPRAFNCRVQAIPLCSI-RLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDE 95
           RF    I+ +      + IPLC + RLGPNPS ISAMSSKQGGKAKPLKQPKVDKK+YDE
Sbjct: 10  RFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDE 69

Query: 96  VDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKKSGKK 134
           VDMAN+QKKKDEEKAL+ELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 70  VDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK 109

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy TrEMBL
Match: A0A6J1IRF0 (translation machinery-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111479817 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 1.01e-34
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 63  PNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGT 122
           PNP+ ISAMSSKQGGKAKPLKQPKV+KK+YDEVDMANIQKKKDEEKALRELRAKAQQKG 
Sbjct: 30  PNPNDISAMSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGA 89

Query: 123 FGGAGLKKSGKK 134
           FGGAGLKKSGKK
Sbjct: 90  FGGAGLKKSGKK 101

[Close]

BLAST of MC09g_new0059.1 vs. ExPASy TrEMBL
Match: A0A6J1EBW2 (translation machinery-associated protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111431777 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 1.24e-34
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 63  PNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGT 122
           PNP+ ISAMSSKQGGKAKPLKQPKV+KK+YDEVDMANIQKKKDEEKALRELRAKAQQKG 
Sbjct: 37  PNPNDISAMSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGA 96

Query: 123 FGGAGLKKSGKK 134
           FGGAGLKKSGKK
Sbjct: 97  FGGAGLKKSGKK 108

[Close]

BLAST of MC09g_new0059.1 vs. TAIR 10
Match: AT1G15270.1 (Translation machinery associated TMA7 )

HSP 1 Score: 107.8 bits (268), Expect = 6.7e-24
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MSSKQGGKAKPLKQPK DKKEYDE D+ANIQKKKDEEKAL+ELRAKA QKG+FGG+GLKK
Sbjct: 1   MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

[Close]

BLAST of MC09g_new0059.1 vs. TAIR 10
Match: AT3G16040.1 (Translation machinery associated TMA7 )

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20
Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 71  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 130
           MSSKQGGK KPLKQPK  KKEYDE DM  +QKKKDEEKAL+ELRAKA QKG+FGG+GLKK
Sbjct: 1   MSSKQGGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 131 SGKK 135
           SGKK
Sbjct: 61  SGKK 64

The following BLAST results are available for this feature:

BLAST of MC09g_new0059.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1A4Q4	9.1e-10	59.38	Translation machinery-associated protein 7 OS=Bos taurus OX=9913 GN=TMA7 PE=3 SV...	[more]
Q9Y2S6	9.1e-10	59.38	Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 ...	[more]
Q8K003	9.1e-10	59.38	Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3...	[more]
Q05AK9	1.2e-09	56.25	Translation machinery-associated protein 7 OS=Danio rerio OX=7955 GN=tma7 PE=3 S...	[more]
Q9XZS3	1.6e-09	56.25	Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX...	[more]

BLAST of MC09g_new0059.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145738.1	1.59e-56	100.00	translation machinery-associated protein 7 [Momordica charantia]	[more]
KAA0049143.1	5.55e-40	89.29	F9L1.21 protein [Cucumis melo var. makuwa] >TYK17418.1 F9L1.21 protein [Cucumis ...	[more]
KGN56723.1	6.27e-40	78.00	hypothetical protein Csa_009747 [Cucumis sativus]	[more]
XP_023512250.1	8.17e-37	78.72	LOW QUALITY PROTEIN: translation machinery-associated protein 7-like [Cucurbita ...	[more]
XP_022980452.1	2.08e-34	93.06	translation machinery-associated protein 7-like [Cucurbita maxima]	[more]

BLAST of MC09g_new0059.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWS4	7.72e-57	100.00	translation machinery-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7TZV6	2.69e-40	89.29	F9L1.21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G0028...	[more]
A0A0A0L4M8	3.04e-40	78.00	F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1	[more]
A0A6J1IRF0	1.01e-34	93.06	translation machinery-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EBW2	1.24e-34	93.06	translation machinery-associated protein 7-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MC09g_new0059.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15270.1	6.7e-24	89.06	Translation machinery associated TMA7	[more]
AT3G16040.1	2.6e-20	82.81	Translation machinery associated TMA7	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..134
None	No IPR available	PANTHER	PTHR28632:SF9	F9L1.21 PROTEIN	coord: 42..134
IPR015157	Translation machinery associated TMA7	PFAM	PF09072	TMA7	coord: 73..134 e-value: 4.3E-22 score: 78.7
IPR015157	Translation machinery associated TMA7	PANTHER	PTHR28632	TRANSLATION MACHINERY-ASSOCIATED PROTEIN 7	coord: 42..134

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC09g_new0059	MC09g_new0059	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC09g_new0059.1-cds	MC09g_new0059.1-cds-MC09:2576884..2576964	CDS
MC09g_new0059.1-cds	MC09g_new0059.1-cds-MC09:2577056..2577097	CDS
MC09g_new0059.1-cds	MC09g_new0059.1-cds-MC09:2578402..2578457	CDS
MC09g_new0059.1-cds	MC09g_new0059.1-cds-MC09:2578624..2578734	CDS
MC09g_new0059.1-cds	MC09g_new0059.1-cds-MC09:2579868..2579982	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC09g_new0059.1	MC09g_new0059.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation