MC08g2334.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2334.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	pathogenesis-related protein PR-4-like
Location	MC08: 32211033 .. 32211979 (+)
Sequence length	836
RNA-Seq Expression	MC08g2334.1
Synteny	MC08g2334.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCTAAGAATGGAAATAAATACCATTTTTATTACGGTATGTTTGATTTGACGTATAGGATGAGAGGGAGAAATGAATGAGATTTGAGTGGAAAAGTATGCCCTCATCTTCCTCTATAAATTAAAGCAATCTCCCAACCAAACCACACATACACAAAAAAAAAAACACAAAACATTTAGTGATACAGAGATTAAGAGGGAGAGAGAATATGGAGAGAGGAATTTTGGTGATGTTGGTTTTGGGTTTGTGCCTTTTGGGTGTGGCCAATGCCCAAAGTGCCACAAATGTTAGGGCTACATATCACTTGTACAACCCACAAAACATCAATTGGGATTATCTTAGGGCAAGTGTCTTCTGTGCCACATGGGATGCCAACAAGCCCTTGGAGTGGCGCCGCCGTTACGGCTGGACCGCCTTTTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCCTGCGGTCGCTGCTTGAGGGTATGTATGCAAGTCTTCTCTTCACGAGTTTTGATTTTACGAACAATATATCAACAATTTGGGTTAAAAAAATTGTTTGGAAGCTGAGGAAATTCATTGCAATGTGTGCAGGTGACCAACACTGAAACTAGAGCTTCAGCAATAGTAAGGATTGTGGATCAATGTGCCAATGGAGGATTAGATTTGGATGTGAATGTTTTTAATAGCATTGACACCAATGGAAATGGACATGCTCGTGGCCATATGTTCGTCAATTACCAGTTTGTCAATTGCTGAGATTCTTCTTTTACTTCATTCTTCCTAAGAAGAAGAATGAGGAAAAGAAAATCATGTATGCGCGACTGGATAAATAAATTATGAATAAATGATGAACTAAGTGTTTTTCAATTCTATGAGCTACGAATTTGAAGTTGAGATTAATTCGACGTGTGTGTGAGATAACTTTAGAGTATGTATTGCTTTCATTATAAATACTTCG

mRNA sequence

CGGCTAAGAATGGAAATAAATACCATTTTTATTACGGTATGTTTGATTTGACGTATAGGATGAGAGGGAGAAATGAATGAGATTTGAGTGGAAAAGTATGCCCTCATCTTCCTCTATAAATTAAAGCAATCTCCCAACCAAACCACACATACACAAAAAAAAAAACACAAAACATTTAGTGATACAGAGATTAAGAGGGAGAGAGAATATGGAGAGAGGAATTTTGGTGATGTTGGTTTTGGGTTTGTGCCTTTTGGGTGTGGCCAATGCCCAAAGTGCCACAAATGTTAGGGCTACATATCACTTGTACAACCCACAAAACATCAATTGGGATTATCTTAGGGCAAGTGTCTTCTGTGCCACATGGGATGCCAACAAGCCCTTGGAGTGGCGCCGCCGTTACGGCTGGACCGCCTTTTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCCTGCGGTCGCTGCTTGAGGGTGACCAACACTGAAACTAGAGCTTCAGCAATAGTAAGGATTGTGGATCAATGTGCCAATGGAGGATTAGATTTGGATGTGAATGTTTTTAATAGCATTGACACCAATGGAAATGGACATGCTCGTGGCCATATGTTCGTCAATTACCAGTTTGTCAATTGCTGAGATTCTTCTTTTACTTCATTCTTCCTAAGAAGAAGAATGAGGAAAAGAAAATCATGTATGCGCGACTGGATAAATAAATTATGAATAAATGATGAACTAAGTGTTTTTCAATTCTATGAGCTACGAATTTGAAGTTGAGATTAATTCGACGTGTGTGTGAGATAACTTTAGAGTATGTATTGCTTTCATTATAAATACTTCG

Coding sequence (CDS)

ATGGAGAGAGGAATTTTGGTGATGTTGGTTTTGGGTTTGTGCCTTTTGGGTGTGGCCAATGCCCAAAGTGCCACAAATGTTAGGGCTACATATCACTTGTACAACCCACAAAACATCAATTGGGATTATCTTAGGGCAAGTGTCTTCTGTGCCACATGGGATGCCAACAAGCCCTTGGAGTGGCGCCGCCGTTACGGCTGGACCGCCTTTTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCCTGCGGTCGCTGCTTGAGGGTGACCAACACTGAAACTAGAGCTTCAGCAATAGTAAGGATTGTGGATCAATGTGCCAATGGAGGATTAGATTTGGATGTGAATGTTTTTAATAGCATTGACACCAATGGAAATGGACATGCTCGTGGCCATATGTTCGTCAATTACCAGTTTGTCAATTGCTGA

Protein sequence

MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

Homology

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BLAST of MC08g2334.1 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.7e-57
Identity = 100/127 (78.74%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 15  LLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPV 74
           ++ VA AQSATNVRATYHLYNPQNINWD   ASV+CATWDA+KPLEWRRRYGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 75  GPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFV 134
           GP GQASCGRCLRVTNT T     VRIVDQC NGGLDLDVNVFN +DTNG G+ RG++ V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 135 NYQFVNC 142
           NY+FVNC
Sbjct: 137 NYEFVNC 143

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BLAST of MC08g2334.1 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.0e-56
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 0


Query: 5   ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRR 64
           + V L++   ++ +A AQSATNVR+TYHLYNPQNINWD   AS FCATWDA+KPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 65  YGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNG 124
           YGWTAFCGP GPRGQ SCGRCLRVTNT T   A VRIVDQC+NGGLDLDVNVFN +DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 125 NGHARGHMFVNYQFVNC 142
            G+ +GH+ VNY+FVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

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BLAST of MC08g2334.1 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-55
Identity = 97/137 (70.80%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 5   ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRR 64
           + V L++   ++ +A AQSATNVR+TYHLYNPQNINWD   AS FCATWDA+KPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 65  YGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNG 124
           YGWTAFCGP GPRGQ SCGRCLRVTNT T     VRIVDQC+NGGLDLDVNVFN +DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 125 NGHARGHMFVNYQFVNC 142
            G+ +GH+ VNY+FVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

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BLAST of MC08g2334.1 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-52
Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 23  SATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASC 82
           SA NVRATYH+YNPQN+ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRG+ SC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 83  GRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC 142
           G+CLRVTNT T A   VRIVDQC+NGGLDLDVNVF  IDT+GNG+ +GH+ VNYQFV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of MC08g2334.1 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-50
Identity = 85/119 (71.43%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 23  SATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASC 82
           SA NVRATYH+YNPQN+ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 83  GRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC 142
           G+CLRVTNT T A   VRIVDQC+NGGLDLD+NVF  IDT+G G+ +GH+ VNYQFVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

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BLAST of MC08g2334.1 vs. NCBI nr
Match: XP_022143159.1 (pathogenesis-related protein PR-4-like [Momordica charantia])

HSP 1 Score: 300 bits (767), Expect = 9.29e-103
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE 60
           MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE
Sbjct: 1   MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE 60

Query: 61  WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI 120
           WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI
Sbjct: 61  WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI 120

Query: 121 DTNGNGHARGHMFVNYQFVNC 141
           DTNGNGHARGHMFVNYQFVNC
Sbjct: 121 DTNGNGHARGHMFVNYQFVNC 141

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BLAST of MC08g2334.1 vs. NCBI nr
Match: XP_038890575.1 (pathogenesis-related protein PR-4-like [Benincasa hispida])

HSP 1 Score: 256 bits (655), Expect = 1.16e-85
Identity = 120/142 (84.51%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+G I+++LVL L +L +ANAQSA NVRATYHLYNPQNINWDYLRASV+CATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSMANAQSANNVRATYHLYNPQNINWDYLRASVYCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTET AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASTIVRIVDQCSNGGLDLDVNVFKQ 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           +DTNGNG+ RGH+ VNYQFVNC
Sbjct: 121 LDTNGNGNFRGHLTVNYQFVNC 142

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BLAST of MC08g2334.1 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (651), Expect = 4.74e-85
Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+G I+++LVL L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET AS IVRIVDQCANGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG+ RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. NCBI nr
Match: XP_023521169.1 (pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (649), Expect = 9.57e-85
Identity = 119/142 (83.80%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           M++G  L++L L L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPL
Sbjct: 1   MDKGRFLMLLALALGILSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           E+RRRYGWTAFCGPVGPRGQASCGRCLRVTNTET+AS IVRIVDQC+NGGLDLDVNVF  
Sbjct: 61  EFRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETKASEIVRIVDQCSNGGLDLDVNVFRR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG+ RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGYRRGHLIVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. NCBI nr
Match: XP_022999102.1 (pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo] >XP_023547311.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252 bits (643), Expect = 7.86e-84
Identity = 119/142 (83.80%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+G  L++L L L +L +ANAQSA NVRATYHLYNPQ+INWDYLRASVFCATWDANKP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET AS IVRIVDQCANGGLDLDVNVF  
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG  RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. ExPASy TrEMBL
Match: A0A6J1CNH9 (pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC111013095 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 4.50e-103
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE 60
           MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE
Sbjct: 1   MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLE 60

Query: 61  WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI 120
           WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI
Sbjct: 61  WRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSI 120

Query: 121 DTNGNGHARGHMFVNYQFVNC 141
           DTNGNGHARGHMFVNYQFVNC
Sbjct: 121 DTNGNGHARGHMFVNYQFVNC 141

[Close]

BLAST of MC08g2334.1 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 2.29e-85
Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+G I+++LVL L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET AS IVRIVDQCANGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG+ RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 2.29e-85
Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+G I+++LVL L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET AS IVRIVDQCANGGLDLDVNVF  
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG+ RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. ExPASy TrEMBL
Match: A0A6J1K9X1 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493583 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 3.81e-84
Identity = 119/142 (83.80%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+G  L++L L L +L +ANAQSA NVRATYHLYNPQ+INWDYLRASVFCATWDANKP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET AS IVRIVDQCANGGLDLDVNVF  
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG  RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. ExPASy TrEMBL
Match: A0A6J1G2U1 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450306 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 1.09e-83
Identity = 119/142 (83.80%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MER-GILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPL 60
           ME+  IL++L L L +L +ANAQSA NVRATYHLYNPQ+INWDYLRASVFCATWDANKP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNS 120
           EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET AS IVRIVDQCANGGLDLDVNVF  
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGHARGHMFVNYQFVNC 141
           IDTNGNG  RGH+ VNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of MC08g2334.1 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 191.4 bits (485), Expect = 4.8e-49
Identity = 81/120 (67.50%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 22  QSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQAS 81
           +SA+NVRATYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQAS
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 82  CGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC 141
           CG+CLRV NT T A+  VRIVDQC+NGGLDLDV +FN IDT+G G+ +GH+ V+YQFV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of MC08g2334.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32045	4.7e-57	78.74	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P29063	3.0e-56	71.53	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P29062	2.6e-55	70.80	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09761	3.5e-52	73.11	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	1.1e-50	71.43	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]

BLAST of MC08g2334.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143159.1	9.29e-103	100.00	pathogenesis-related protein PR-4-like [Momordica charantia]	[more]
XP_038890575.1	1.16e-85	84.51	pathogenesis-related protein PR-4-like [Benincasa hispida]	[more]
XP_008456018.1	4.74e-85	85.21	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p...	[more]
XP_023521169.1	9.57e-85	83.80	pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo] >XP_023547312....	[more]
XP_022999102.1	7.86e-84	83.80	pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathog...	[more]

BLAST of MC08g2334.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNH9	4.50e-103	100.00	pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3D4G8	2.29e-85	85.21	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C3H6	2.29e-85	85.21	pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P...	[more]
A0A6J1K9X1	3.81e-84	83.80	pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1G2U1	1.09e-83	83.80	pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of MC08g2334.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	4.8e-49	67.50	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 95..113 score: 77.89 coord: 57..75 score: 79.3 coord: 76..94 score: 71.23 coord: 116..140 score: 62.4
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 23..141 e-value: 1.2E-58 score: 196.2
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 22..141 score: 80.235161
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 22..141 e-value: 2.2E-55 score: 187.7
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 22..141
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 5..141
None	No IPR available	PANTHER	PTHR46351:SF6	PATHOGENESIS-RELATED PROTEIN PR-4A	coord: 5..141
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 134..141
IPR018226	Barwin, conserved site	PROSITE	PS00771	BARWIN_1	coord: 82..90

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC08g2334	MC08g2334	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2334.1-utr5	MC08g2334.1-utr5-MC08:32211033..32211240	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2334.1-cds	MC08g2334.1-cds-MC08:32211241..32211501	CDS
MC08g2334.1-cds	MC08g2334.1-cds-MC08:32211613..32211777	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2334.1-utr3	MC08g2334.1-utr3-MC08:32211778..32211979	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC08g2334.1	MC08g2334.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
molecular_function	GO:0004540	ribonuclease activity