MC08g2268.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2268.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-type domain-containing protein
Location	MC08: 31494232 .. 31497771 (-)
Sequence length	1147
RNA-Seq Expression	MC08g2268.1
Synteny	MC08g2268.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGAAACTGAGATTTAAAACCTTGATTAGCGGTGGTAAATTGTATAAATTTCGAGCCGACGTGTCGTTTACGTCAAAAGTTGGGGATGACGTTTGAAATCGAGTGGTCGTTCTCCTTGTAAACGCATGTCGGAAAGCGCCATGGAATTGCAGAGCACTGCGCAAAAGGAGATGGAGACGGCCAGTTCTTCTTACGACGATACGAACCCCTGCCCGATCTGTCTCGGATCCATAATTCGACCTTCTTACCTCGACAAATGCTTCCGTACTTCTCTATCTCTCTCAATCTCATCATTCTCTTGTTTTTCTTGAATTTTCCGGTAATCCAACAGATAACTATTTTGAAATATTGTTCATTTGTACGAATTAGGGTTTTTTAATCATATAGTTACCTACTTGGAAATGACCCTTTATGTGTTACTGCCACTTTATTGTCCTTTTAGGGGATTTCAGCTCCTAGCTCTTTCTCATATTTGCTGGACGAAATTGTTCGATCACTATAGTATGTTGTAAGATAGAATTAAGGGGTTTCATTTGGGATAAATTAGCTAATTCTTTACTTTGAGTGGACATAAAATTCTTCTACAGATGCTCAATTTTATTCAGGCAAGCCGTTTCTTCTTCAAGGAAAATAGAAACAACAGTAAGTTTGCTATGGTGGCTTTGGTACGTTGAGTGTACTCATTGATGGACTCTGTTACCTTCTTTGAGATGAGTTTGATCATATATATATATATCTATCTATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATTTGTATCCATGAGGGTCTAGACTAGCTTACGCGGATCTCAACTAAGCTTACGGGACAACCGCCTGACCCTACTATATTTGGTTGATTGTCGAGGAAATATGTAGGACATTAAATTCTAGGTTGGTGGCCACCATGGGGTTTGAGCCTTCCTTATAAGTGGACTTGAATATTGATTTTAGTTACGTTGAAAAATGCATGGAACAATGATATTCTGTTGATCACTAGTAATTCTAAAGTTTGAGCTTTAAAGTTTGAGTGAATTTGGTGATTGAATTTACTCTTAAAAAAGTTATCCATCCGTTCATTCATGTTAAGTACAATTTACTATTAGGGAATGTCAATATAGTTTTCCAGTTCGAATGCTTTTAATTCTATTTCTTGTCTTGCAGATAAGTTTTGTTACAATTGCATTGTGCAATGGACCAAAGTGGTTTCTGGCAAGCGCTCCTGCATTCTTTCGCCCATTAAGTGTCCTTTATGCAAGGTTATATCTTCCGTCCCCTGTTGTATAAGTATTGTTTTATATTAGCATTCCATACTTTTTGTATTGAATTTCTTATCATATTGAATCACCAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGGCATTACGTTAATCAGGATTTTCAGGATAGGTATCTCCCTGTTGACACTTTTCCTTAGATTTCCTATTCTTATTTTCTCTGCATTAATTGACTATGTTTTTATCACTGATGCTATTTGCAGCTTTATCTTATCAAAAGCCCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTCATGTTCTGCTAGTCATTATACTCATTATGTGGATGTTTGATGCTCCGACATTTACTTCATGATTACTCAAAGTTATGTATTTCCCCTAATTGTCTACGTGTAGGTTTCTTGGAGGACATATTCAATGTACAAAGATACTGGAAATTACGAAAGTATCTCCAAGCAAACCAATGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGTTCCTGACTTAGTTTCCTACATTGCATTTATACTTGTATGGAATACTGCTTCCTTAATTCGGTCCTTTTTGGTTTTGGAGAATGTTTAATGCCCAACATCAAACATAATTCTCACGACAAAAGAGGCAATTGGAAAGGGGAGCAATTTCTGCACCCCATTGCCAATTCTCCTGTGGTTGGATTCTCTAGAACCACAAGAATCTTATCACTACACCTTAATTAATGAGTTTTTAAAATCCAAAATGCCATCGGTATAAAAGATGCAACATGGGGAGATAAAAGGAAAAAGGGGATGGGATTTCACTCGCTTTGGGCATAGTCTCCCTGGAGGGTTTATTTGTTGAATGAGAATTTGAGAACTCTGTTTTCGTTTAATGGGTTATAAGAACTATGTGTATTCTGGATATGTAGCTGTTGTGGGAATTAAGTAGTCAAGATGAAGTAAAAATGTGCCTGTAGTCCTCCCTTTGCTTTAACTTTGTGGATAGTACATTGGTCAATCACACAATTTAGTAGGCAAAGCTTTCCTGTAGACATTTAAAAGTTCCATTTCTGATACGATGTTCTCTATAAGAACCAACAATGTTAGTACAAAATGACCCCGTTTCTGTGTCATAGTTTATTGATTTATCCATTCTATTTCTATGTACTCCAGTTCCTTGTGTGTGTGATGACTGATAGTATCTATTATCCTTTTACAGGAAGAAGATGTTGACATAATTATGCACCACCTACTTGGCTTAATCAATCCATTTTTTAGTAGGTAATAACTTTCAGTTGTTGCTTTCTAGATTTTGATCAAATAAAAATTTGGTCACCACAAACCTATCAGTTCTTTTATAACTATGGTGTCAAGACCCACGCTATGTATTATGCTCCTTACACACCCCACTAATCTCTAGGAGGCTTCTCTCACCCTAAGGCTAAAGACTATAAAGGTGCTAAATTATTAATTTTTCAACCTAAATTTGAACCGAGGAACTTGGATAATATCTTCCAAACACCCCAAGAGCTTATCACCACACACTTATCATTACAATCTCCTTTTTCTTTTAAGCCTTTTGTTGTGGAATAAAAATGTTTGAGCTTATCACCACAGTTGAGAATATTTACTTTCATTCCTCTCTAACTATGACTTTTCCACCTGAACGTAAATATGCACGACTTGATTACTGATTACACTCTGAAACCTGATTCTTCTTTGATTTTTCTTGAAGAAATGAACAAAAGTATCAAACAGAATCTCCTGAAGTGAAGCAGGAAAAGTTCAGCAGCATCGTCCACGATGCAGCAAAGCCGTTTCTGTCAGCAAGAGCGGACCGATTCGTGCATGAGCTGGAACTGTTTCTTGCTTCAGGTTTGAACATCGAAGCCTACGATTCGGTTTACTTGCAACGGTTGGGCTGGAGTGAGCCAGTGGTGCCTAGTGTGGCTATCAAAGAAGATCTTGGACTCAAACCTGTAACTCCATACTTGTACATCTTTGACTATGACCCTGATGATGGTGAATAAAAAAGTTCTTCCTCTTCCAGTTTGAGTTGAATGAAAAGTTGTTGGAATTTGATTGTATATTTTCATTCGAGTCTGGATAGCTATTTAACCTGTCAAGTTGTTTGCTGTAACTTTTGGTTATTGAATTTGTCATCTTTTATCTACCTATTAATATTTGTCCCATTGAGATGGGTTGCTTACC

mRNA sequence

CACGAAACTGAGATTTAAAACCTTGATTAGCGGTGGTAAATTGTATAAATTTCGAGCCGACGTGTCGTTTACGTCAAAAGTTGGGGATGACGTTTGAAATCGAGTGGTCGTTCTCCTTGTAAACGCATGTCGGAAAGCGCCATGGAATTGCAGAGCACTGCGCAAAAGGAGATGGAGACGGCCAGTTCTTCTTACGACGATACGAACCCCTGCCCGATCTGTCTCGGATCCATAATTCGACCTTCTTACCTCGACAAATGCTTCCATAAGTTTTGTTACAATTGCATTGTGCAATGGACCAAAGTGGTTTCTGGCAAGCGCTCCTGCATTCTTTCGCCCATTAAGTGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGGCATTACGTTAATCAGGATTTTCAGGATAGCTTTATCTTATCAAAAGCCCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGAGGACATATTCAATGTACAAAGATACTGGAAATTACGAAAGTATCTCCAAGCAAACCAATGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTACTTGGCTTAATCAATCCATTTTTTAGTAGAAATGAACAAAAGTATCAAACAGAATCTCCTGAAGTGAAGCAGGAAAAGTTCAGCAGCATCGTCCACGATGCAGCAAAGCCGTTTCTGTCAGCAAGAGCGGACCGATTCGTGCATGAGCTGGAACTGTTTCTTGCTTCAGGTTTGAACATCGAAGCCTACGATTCGGTTTACTTGCAACGGTTGGGCTGGAGTGAGCCAGTGGTGCCTAGTGTGGCTATCAAAGAAGATCTTGGACTCAAACCTGTAACTCCATACTTGTACATCTTTGACTATGACCCTGATGATGGTGAATAAAAAAGTTCTTCCTCTTCCAGTTTGAGTTGAATGAAAAGTTGTTGGAATTTGATTGTATATTTTCATTCGAGTCTGGATAGCTATTTAACCTGTCAAGTTGTTTGCTGTAACTTTTGGTTATTGAATTTGTCATCTTTTATCTACCTATTAATATTTGTCCCATTGAGATGGGTTGCTTACC

Coding sequence (CDS)

ATGTCGGAAAGCGCCATGGAATTGCAGAGCACTGCGCAAAAGGAGATGGAGACGGCCAGTTCTTCTTACGACGATACGAACCCCTGCCCGATCTGTCTCGGATCCATAATTCGACCTTCTTACCTCGACAAATGCTTCCATAAGTTTTGTTACAATTGCATTGTGCAATGGACCAAAGTGGTTTCTGGCAAGCGCTCCTGCATTCTTTCGCCCATTAAGTGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGGCATTACGTTAATCAGGATTTTCAGGATAGCTTTATCTTATCAAAAGCCCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGAGGACATATTCAATGTACAAAGATACTGGAAATTACGAAAGTATCTCCAAGCAAACCAATGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTACTTGGCTTAATCAATCCATTTTTTAGTAGAAATGAACAAAAGTATCAAACAGAATCTCCTGAAGTGAAGCAGGAAAAGTTCAGCAGCATCGTCCACGATGCAGCAAAGCCGTTTCTGTCAGCAAGAGCGGACCGATTCGTGCATGAGCTGGAACTGTTTCTTGCTTCAGGTTTGAACATCGAAGCCTACGATTCGGTTTACTTGCAACGGTTGGGCTGGAGTGAGCCAGTGGTGCCTAGTGTGGCTATCAAAGAAGATCTTGGACTCAAACCTGTAACTCCATACTTGTACATCTTTGACTATGACCCTGATGATGGTGAATAA

Protein sequence

MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE

Homology

[Close]

BLAST of MC08g2268.1 vs. ExPASy Swiss-Prot
Match: Q80Z37 (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-10
Identity = 32/109 (29.36%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 14  KEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKRSCILSPIK 73
           K  +T  +     + CPICL      SYLD+C HKFC+ C+ +W+K          +  +
Sbjct: 89  KLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------NKAE 148

Query: 74  CPLCKTESSSIIHGLDGH-CFQRHYVNQDFQDSFILSKAHKYRLQCYYT 122
           CPLCK    SI H +     F+ + +   +  SF   +  ++R +   T
Sbjct: 149 CPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRFRYRTTMT 187

[Close]

BLAST of MC08g2268.1 vs. ExPASy Swiss-Prot
Match: Q9NS56 (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-09
Identity = 32/104 (30.77%), Postives = 50/104 (48.08%), Query Frame = 0


Query: 14  KEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKRSCILSPIK 73
           K  +T  +     + CPICL      SYLD+C HKFC+ C+ +W+K          +  +
Sbjct: 88  KLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------NKAE 147

Query: 74  CPLCKTESSSIIHGLDGH-CFQRHYVNQDFQDSFIL-SKAHKYR 116
           CPLCK    SI H +     F+ + +   +  SF+   +  +YR
Sbjct: 148 CPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFVTPDRRFRYR 181

[Close]

BLAST of MC08g2268.1 vs. ExPASy Swiss-Prot
Match: P29129 (E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) OX=31523 GN=EP0 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 23/61 (37.70%), Postives = 30/61 (49.18%), Query Frame = 0


Query: 29 CPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKRSCILSPIKCPLCKTESSSIIHGL 88
          CPICL      +    C HKFC +CI +WT          L+   CPLC    +SI+H +
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWT----------LTSTACPLCNARVTSILHHV 96

Query: 89 D 90
          D
Sbjct: 106 D 96

[Close]

BLAST of MC08g2268.1 vs. NCBI nr
Match: XP_022150768.1 (uncharacterized protein LOC111018833 [Momordica charantia])

HSP 1 Score: 579 bits (1492), Expect = 1.03e-208
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60
           MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120
           VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
           SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of MC08g2268.1 vs. NCBI nr
Match: XP_038889020.1 (uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida])

HSP 1 Score: 506 bits (1303), Expect = 6.41e-180
Identity = 242/277 (87.36%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60
           MSE AMELQSTA  E  T+SS  DDTNPCPICLG II+PSYLDKCFHKFCYNCI+QWTKV
Sbjct: 1   MSERAMELQSTAPVETATSSSFSDDTNPCPICLGLIIQPSYLDKCFHKFCYNCILQWTKV 60

Query: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120
           VSGK SC+LS IKCPLCKTESSSIIHGLDGHC QRHYVN+DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKHSCMLSSIKCPLCKTESSSIIHGLDGHCLQRHYVNRDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL+DIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEED+DIIMHHLLG IN FF
Sbjct: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDIDIIMHHLLGFINSFF 180

Query: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
           SRNE +YQTE+PE+K+E F+ +V DAAKPFLSARADRFV ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEPRYQTETPELKRETFNRMVLDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDD 277
           QRLGW+EPVVP +AIKEDLGLKPVTPYLYIF+YDPDD
Sbjct: 241 QRLGWNEPVVPIMAIKEDLGLKPVTPYLYIFEYDPDD 277

[Close]

BLAST of MC08g2268.1 vs. NCBI nr
Match: XP_022999126.1 (uncharacterized protein LOC111493604 [Cucurbita maxima])

HSP 1 Score: 492 bits (1267), Expect = 1.64e-174
Identity = 233/274 (85.04%), Postives = 255/274 (93.07%), Query Frame = 0


Query: 6   MELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TA  EMET+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGF 125
           SC LS IKCPLCKTES SIIHGLDGHCFQRHYVNQDFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQ 185
           L+DIFNVQ+YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLG I+ FFSRNE 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 KYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           +YQTE+P++K+++F+S++ DAAKPFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           ++P  PS+A+ EDLGL+PVTPYL+IFDYDPDDG+
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of MC08g2268.1 vs. NCBI nr
Match: XP_022946760.1 (uncharacterized protein LOC111450733 [Cucurbita moschata])

HSP 1 Score: 490 bits (1262), Expect = 9.46e-174
Identity = 233/274 (85.04%), Postives = 255/274 (93.07%), Query Frame = 0


Query: 6   MELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TA  EMET+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGF 125
           SC LS IKCPLCKTES SIIHGLDGHCFQRHYVNQDFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQ 185
           L+DIF+VQ+YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLG I+ FFSRNE 
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 KYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           +YQTE+P++K+E+F+S++ DAAKPFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           ++PV PS+A+ EDLG +PVTPYL+IFDYDPDDG+
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of MC08g2268.1 vs. NCBI nr
Match: XP_023545827.1 (uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489 bits (1259), Expect = 2.71e-173
Identity = 232/274 (84.67%), Postives = 255/274 (93.07%), Query Frame = 0


Query: 6   MELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TA  EMET+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGF 125
           SC LS IKCPLCKTES SIIHGLDGHCFQRHYVNQDFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQ 185
           L+DIF+VQ+YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLG I+ FFSRNE 
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 KYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           +YQTE+P++K+++F+S++ DAAKPFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           ++PV PS+A+ EDLG +PVTPYL+IFDYDPDDG+
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of MC08g2268.1 vs. ExPASy TrEMBL
Match: A0A6J1DAB4 (uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018833 PE=4 SV=1)

HSP 1 Score: 579 bits (1492), Expect = 4.97e-209
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60
           MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120
           VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
           SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of MC08g2268.1 vs. ExPASy TrEMBL
Match: A0A6J1KC78 (uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604 PE=4 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 7.92e-175
Identity = 233/274 (85.04%), Postives = 255/274 (93.07%), Query Frame = 0


Query: 6   MELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TA  EMET+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGF 125
           SC LS IKCPLCKTES SIIHGLDGHCFQRHYVNQDFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQ 185
           L+DIFNVQ+YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLG I+ FFSRNE 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 KYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           +YQTE+P++K+++F+S++ DAAKPFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           ++P  PS+A+ EDLGL+PVTPYL+IFDYDPDDG+
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of MC08g2268.1 vs. ExPASy TrEMBL
Match: A0A6J1G4Z2 (uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC111450733 PE=4 SV=1)

HSP 1 Score: 490 bits (1262), Expect = 4.58e-174
Identity = 233/274 (85.04%), Postives = 255/274 (93.07%), Query Frame = 0


Query: 6   MELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TA  EMET+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGF 125
           SC LS IKCPLCKTES SIIHGLDGHCFQRHYVNQDFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQ 185
           L+DIF+VQ+YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLG I+ FFSRNE 
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 KYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           +YQTE+P++K+E+F+S++ DAAKPFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           ++PV PS+A+ EDLG +PVTPYL+IFDYDPDDG+
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of MC08g2268.1 vs. ExPASy TrEMBL
Match: A0A0A0LLN5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 PE=4 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 2.22e-171
Identity = 232/279 (83.15%), Postives = 252/279 (90.32%), Query Frame = 0


Query: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60
           MS  +MELQSTA  EMET +S+ D TNPCPICLG I + SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120
           VSGKRSC LS IKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAH+YRLQCYY
Sbjct: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120

Query: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL DIF+VQRYWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH LGLIN FF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180

Query: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
            RNE +YQTE+PE+K+++FS  + DAAKPFLSARADRF+ ELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279
           QRLGW++P+VPSVA +EDLGLK VTPYLYIFD DPDDG+
Sbjct: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 279

[Close]

BLAST of MC08g2268.1 vs. ExPASy TrEMBL
Match: A0A5D3D454 (RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00310 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 9.70e-168
Identity = 229/277 (82.67%), Postives = 250/277 (90.25%), Query Frame = 0


Query: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60
           MSE +MELQS A  E++T++S+ D T+PCPICLG I + SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSEKSMELQSAASMEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120
           VSGKRSC LS IKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCRLSSIKCPLCKTESSSIIHGLDGHHFQRHYVNPDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL DIF+VQRYWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH +GLIN FF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFF 180

Query: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
            RNE KYQTE+PE+K+++FS  + DAAKPFLSARADRF+ ELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPKYQTETPELKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDD 277
           QRLGW+EP+V SVA +EDLGLK VTPYLYIFD DPDD
Sbjct: 241 QRLGWNEPIVLSVANEEDLGLKSVTPYLYIFDNDPDD 277

[Close]

BLAST of MC08g2268.1 vs. TAIR 10
Match: AT3G05250.1 (RING/U-box superfamily protein )

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-81
Identity = 151/277 (54.51%), Postives = 195/277 (70.40%), Query Frame = 0


Query: 12  AQKEMETASSSYD---DTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKVVSGKRSCI 71
           A KE+   S S D   D +PCPICLG  +R SYLD CFHKFC+NCI QW KVVS K S  
Sbjct: 2   AAKEIAGGSGSIDDGSDFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQ 61

Query: 72  LSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYYTEPGFLED 131
            S + CPLCKTE+ SIIH  DG  F+RHY++ +  D F+L+K  +YRLQCYYTE GFL D
Sbjct: 62  RSSVTCPLCKTENLSIIHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTESGFLAD 121

Query: 132 IFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRNEQ--K 191
           +F+V R+WKL+K+LQ N+ LE WL+RELQAL+QEEDVDI++HHL+G++  F  R +Q  K
Sbjct: 122 VFDVARFWKLQKFLQPNRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRRK 181

Query: 192 YQTESPE-VKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 251
            +T S E   QE+F ++V +AA+PF+ AR DRFV ELELFLA+GLN+EAYD++Y Q L  
Sbjct: 182 QETRSAETTNQEQFKAVVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLEG 241

Query: 252 SEPVVPSVAIKEDLGLKP------VTPYLYIFDYDPD 277
           +       A +E   ++       VTPYL+IF+ D D
Sbjct: 242 NNRREIGAASEEREEVEEHNVRTRVTPYLFIFEEDSD 278

[Close]

BLAST of MC08g2268.1 vs. TAIR 10
Match: AT2G39100.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09
Identity = 64/266 (24.06%), Postives = 102/266 (38.35%), Query Frame = 0


Query: 29  CPICLGSIIR---PSYLDKCFHKFCYNCIVQWTKVVSGKRSCILSPIKCPLCKTESSS-- 88
           CPICL ++      + +  C H +C  CI +W+   S KR+       CPLC T   S  
Sbjct: 39  CPICLENLTERRSAAVITVCKHGYCLACIRKWS---SFKRN-------CPLCNTRFDSWF 98

Query: 89  IIHGL--------------DGHCFQRHYVNQDFQDSFI----------LSKAHKYRLQCY 148
           I+                 D      H  N   +   I           S++     +  
Sbjct: 99  IVSDFASRKYHKEQLPILRDRETLTYHRNNPSDRRRIIQRSRDVLENSSSRSRPLPWRRS 158

Query: 149 YTEPGFLED--IFNVQRYWKLRKY-----------------LQANQW--------LEVWL 208
           +  PG + D  IF  +  W+   Y                 L  N +        +E W+
Sbjct: 159 FGRPGSVPDSVIFQRKLQWRASIYTKQLRAVRLHSRRLELSLAVNDYTKAKITERIEPWI 218

Query: 209 KRELQALIQEEDVDIIMHHLLGLINPFFSRNEQKYQTESPEVKQEKFSSIVHDAAKPFLS 239
           +RELQA++ + D  +I+H    L      R   +   ++  + +++ SS+     + FLS
Sbjct: 219 RRELQAVLGDPDPSVIVHFASALFIKRLERENNRQTGQTGMLVEDEVSSL-----RKFLS 278

[Close]

BLAST of MC08g2268.1 vs. TAIR 10
Match: AT3G05670.1 (RING/U-box protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 23/61 (37.70%), Postives = 29/61 (47.54%), Query Frame = 0


Query: 27  NPCPICLGSIIR---PSYLDKCFHKFCYNCIVQWTKVVSGKRSCILSPIKCPLCKTESSS 85
           N C ICL           LD C H FC+ CI++W+KV S          +CPLCK    +
Sbjct: 411 NVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVES----------RCPLCKQRFRT 461

The following BLAST results are available for this feature:

BLAST of MC08g2268.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80Z37	6.5e-10	29.36	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
Q9NS56	1.5e-09	30.77	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
P29129	2.8e-05	37.70	E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhause...	[more]

BLAST of MC08g2268.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150768.1	1.03e-208	100.00	uncharacterized protein LOC111018833 [Momordica charantia]	[more]
XP_038889020.1	6.41e-180	87.36	uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida]	[more]
XP_022999126.1	1.64e-174	85.04	uncharacterized protein LOC111493604 [Cucurbita maxima]	[more]
XP_022946760.1	9.46e-174	85.04	uncharacterized protein LOC111450733 [Cucurbita moschata]	[more]
XP_023545827.1	2.71e-173	84.67	uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC08g2268.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAB4	4.97e-209	100.00	uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1KC78	7.92e-175	85.04	uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604...	[more]
A0A6J1G4Z2	4.58e-174	85.04	uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A0A0LLN5	2.22e-171	83.15	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 P...	[more]
A0A5D3D454	9.70e-168	82.67	RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of MC08g2268.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05250.1	1.5e-81	54.51	RING/U-box superfamily protein	[more]
AT2G39100.1	7.4e-09	24.06	RING/U-box superfamily protein	[more]
AT3G05670.1	4.2e-04	37.70	RING/U-box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 29..77 e-value: 1.8E-4 score: 30.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 29..78 score: 11.589345
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 6..106 e-value: 7.3E-12 score: 46.5
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 29..77 e-value: 4.3E-8 score: 32.9
None	No IPR available	PANTHER	PTHR47692	RING/U-BOX SUPERFAMILY PROTEIN	coord: 9..277
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 25..85
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC08g2268	MC08g2268	gene

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2268.1-utr3	MC08g2268.1-utr3-MC08:31494232..31494412	utr3

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31494413..31494707	CDS
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31495162..31495223	CDS
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31495926..31496038	CDS
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31496146..31496201	CDS
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31496293..31496372	CDS
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31496465..31496559	CDS
MC08g2268.1-cds	MC08g2268.1-cds-MC08:31497507..31497645	CDS

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2268.1-utr5	MC08g2268.1-utr5-MC08:31497646..31497771	utr5

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC08g2268.1	MC08g2268.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0046872	metal ion binding