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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTACATTAAAATCCTATTTAGAGTCTCAAGGAACACTGAAACTGGACGAAGAAATTATGATGACCACCCTTAGGAAAATATTAGATTATATGATAGGAATGAGATATGGACCAAAGCTACCTAAAAGTCAACGATTGATATTGTACTCAGAAGAGTATGTCCAGACTTTAGAGTCTCACCTTGCAAAGGTTGAGGAA mRNA sequence ATGATTACATTAAAATCCTATTTAGAGTCTCAAGGAACACTGAAACTGGACGAAGAAATTATGATGACCACCCTTAGGAAAATATTAGATTATATGATAGGAATGAGATATGGACCAAAGCTACCTAAAAGTCAACGATTGATATTGTACTCAGAAGAGTATGTCCAGACTTTAGAGTCTCACCTTGCAAAGGTTGAGGAA Coding sequence (CDS) ATGATTACATTAAAATCCTATTTAGAGTCTCAAGGAACACTGAAACTGGACGAAGAAATTATGATGACCACCCTTAGGAAAATATTAGATTATATGATAGGAATGAGATATGGACCAAAGCTACCTAAAAGTCAACGATTGATATTGTACTCAGAAGAGTATGTCCAGACTTTAGAGTCTCACCTTGCAAAGGTTGAGGAA Protein sequence MITLKSYLESQGTLKLDEEIMMTTLRKILDYMIGMRYGPKLPKSQRLILYSEEYVQTLESHLAKVEE
Homology
BLAST of MC03g0256.1 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia]) HSP 1 Score: 60.8 bits (146), Expect = 4.31e-09 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 1 MITLKSYLESQGTLKLDEEIMMTTLRKILDYMIGMRYGPKLPKSQ-RLILYSEEYVQTLE 60
MITLK+Y SQG K +EEIM T L K +Y+IGM YGPK +++ YS+EYV++LE
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 166
Query: 61 SHLAKVEE 67
+ L K EE
Sbjct: 167 ARLQKHEE 174
BLAST of MC03g0256.1 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia]) HSP 1 Score: 60.8 bits (146), Expect = 6.25e-09 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 1 MITLKSYLESQGTLKLDEEIMMTTLRKILDYMIGMRYGPKLPKSQ-RLILYSEEYVQTLE 60
MITLK+Y SQG K +EEIM T L K +Y+IGM YGPK +++ YS+EYV++LE
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 171
Query: 61 SHLAKVEE 67
+ L K EE
Sbjct: 172 ARLQKHEE 179
BLAST of MC03g0256.1 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.09e-09 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 1 MITLKSYLESQGTLKLDEEIMMTTLRKILDYMIGMRYGPKLPKSQ-RLILYSEEYVQTLE 60
MITLK+Y SQG K +EEIM T L K +Y+IGM YGPK +++ YS+EYV++LE
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 166
Query: 61 SHLAKVEE 67
+ L K EE
Sbjct: 167 ARLQKHEE 174
BLAST of MC03g0256.1 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.03e-09 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 1 MITLKSYLESQGTLKLDEEIMMTTLRKILDYMIGMRYGPKLPKSQ-RLILYSEEYVQTLE 60
MITLK+Y SQG K +EEIM T L K +Y+IGM YGPK +++ YS+EYV++LE
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 171
Query: 61 SHLAKVEE 67
+ L K EE
Sbjct: 172 ARLQKHEE 179
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022143616.1 | 4.31e-09 | 52.94 | uncharacterized protein LOC111013476 [Momordica charantia] | [more] |
| XP_022148911.1 | 6.25e-09 | 52.94 | uncharacterized protein LOC111017461 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CQT5 | 2.09e-09 | 52.94 | uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
| A0A6J1D6S9 | 3.03e-09 | 52.94 | uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| MC03g0256 | MC03g0256 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC03g0256.1-cds | MC03g0256.1-cds-MC03:7534558..7534758 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC03g0256.1 | MC03g0256.1-protein | polypeptide |
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