Lsi09G009030.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G009030.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	glutamate decarboxylase
Location	chr09: 10920892 .. 10921650 (+)
Sequence length	627
RNA-Seq Expression	Lsi09G009030.1
Synteny	Lsi09G009030.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAGCCTTCCAAAGCTGACCAAAAATCACTCTATTTAAGCCCCCCTTCTTCTTCATTAACCTCCATTGATCATCTTCTCATTCTTCTCTCTGCAACTAATTTCTTCCTCTCTTGCTTCCATCTCCATCCGCCATGGTTCTCTCCAAGACTGCTTCTCAGACAGATGTTTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTAATCGCGGATCAGATCGGTTCATTGTTTTCGTTTCTCTGTTTGATTTTAGATCTCGAAATTAATTTCTCCAATTCCTATCTCTGATTTGTGTTTTTCCGTGTGATTCTGTTTCTCGATCCATTTCATTTTCAATAATGTCCTGTAATTTGTTGTAGATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACGTTTCTCCATGTCTCTGTTAGCTTTAATCGAAAGATTAGATCGATTTTTCGTTCTATCGTTTCTCTCCATCAACGGTTACTTTCCTCTGGAAATTCTCCTGAACTGCGAATTGCAGCGTTCGGTCGTGGCGAAATTTCTACGACCGAGATTAAAAAAT

mRNA sequence

CATCAGCCTTCCAAAGCTGACCAAAAATCACTCTATTTAAGCCCCCCTTCTTCTTCATTAACCTCCATTGATCATCTTCTCATTCTTCTCTCTGCAACTAATTTCTTCCTCTCTTGCTTCCATCTCCATCCGCCATGGTTCTCTCCAAGACTGCTTCTCAGACAGATGTTTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTAATCGCGGATCAGATCGGTTCATTATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACGTTTCTCCATGTCTCTGTTAGCTTTAATCGAAAGATTAGATCGATTTTTCGTTCTATCGTTTCTCTCCATCAACGGTTACTTTCCTCTGGAAATTCTCCTGAACTGCGAATTGCAGCGTTCGGTCGTGGCGAAATTTCTACGACCGAGATTAAAAAAT

Coding sequence (CDS)

CATCAGCCTTCCAAAGCTGACCAAAAATCACTCTATTTAAGCCCCCCTTCTTCTTCATTAACCTCCATTGATCATCTTCTCATTCTTCTCTCTGCAACTAATTTCTTCCTCTCTTGCTTCCATCTCCATCCGCCATGGTTCTCTCCAAGACTGCTTCTCAGACAGATGTTTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTAATCGCGGATCAGATCGGTTCATTATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACGTTTCTCCATGTCTCTGTTAGCTTTAATCGAAAGATTAGATCGATTTTTCGTTCTATCGTTTCTCTCCATCAACGGTTACTTTCCTCTGGAAATTCTCCTGAACTGCGAATTGCAGCGTTCGGTCGTGGCGAAATTTCTACGACCGAGATTAAAAAAT

Protein sequence

HQPSKADQKSLYLSPPSSSLTSIDHLLILLSATNFFLSCFHLHPPWFSPRLLLRQMFPSTPPSLLDMCEPLSRGNFISLIADQIGSLFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQVRFSMSLLALIERLDRFFVLSFLSINGYFPLEILLNCELQRSVVAKFLRPRLKN

Homology

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy Swiss-Prot
Match: Q42521 (Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKLIM++INKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy Swiss-Prot
Match: Q9ZPS3 (Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           F+MPENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKL+M +INKNYVDMDE
Sbjct: 30  FEMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMESINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy Swiss-Prot
Match: Q07346 (Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMP+NSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKL+M +INKNYVDMDE
Sbjct: 30  FKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy Swiss-Prot
Match: P54767 (Glutamate decarboxylase OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMP+ S+PKEAA+QI+NDELMLDGNPRLNLASFV+TWMEPECDKLIM++INKNYVDMDE
Sbjct: 31  FKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLIMSSINKNYVDMDE 90

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 91  YPVTTELQNR 100

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy Swiss-Prot
Match: Q9LSH2 (Glutamate decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=GAD5 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.3e-30
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMP++ +PK+AA+Q+INDELMLDGNPRLNLASFVTTWMEPECDKLIM ++NKNYVDMDE
Sbjct: 29  FKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDE 88

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 89  YPVTTELQNR 98

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy TrEMBL
Match: A0A6J1JX91 (Glutamate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111489676 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy TrEMBL
Match: A0A371EGV3 (Glutamate decarboxylase 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=GAD1 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 77  ISLIADQIGSLFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMA 136
           IS I   + ++F+MPE SIPK+AA+QII+DELMLDGNPRLNLASFVTTWMEPECDKLIM+
Sbjct: 2   ISSIQPSLLAMFRMPEQSIPKDAAYQIIHDELMLDGNPRLNLASFVTTWMEPECDKLIMS 61

Query: 137 AINKNYVDMDEYPVTTELQVRFSMSL 163
           +INKNYVDMDEYPVTTELQ  FS+SL
Sbjct: 62  SINKNYVDMDEYPVTTELQASFSLSL 87

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy TrEMBL
Match: A0A5N5JH76 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_027481 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMA+INKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDE 89

Query: 148 YPVTTELQVRF 159
           YPVTTELQ  F
Sbjct: 90  YPVTTELQASF 100

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy TrEMBL
Match: A0A6J1FEG7 (Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111444770 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. ExPASy TrEMBL
Match: A0A068U0N0 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036817001 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 5.2e-31
Identity = 69/76 (90.79%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 89

Query: 148 YPVTTELQVRFSMSLL 164
           YPVTTELQ    + LL
Sbjct: 90  YPVTTELQASLLLLLL 105

[Close]

BLAST of Lsi09G009030.1 vs. NCBI nr
Match: KAF3550917.1 (hypothetical protein DY000_02000715 [Brassica cretica])

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-31
Identity = 68/75 (90.67%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 82  DQIGSLFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKN 141
           D +   FKMPENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKLIMA+INKN
Sbjct: 31  DNVNIRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKN 90

Query: 142 YVDMDEYPVTTELQV 157
           YVDMDEYPVTTELQV
Sbjct: 91  YVDMDEYPVTTELQV 105

[Close]

BLAST of Lsi09G009030.1 vs. NCBI nr
Match: KAB5516833.1 (hypothetical protein DKX38_027481 [Salix brachista])

HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMA+INKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDE 89

Query: 148 YPVTTELQVRF 159
           YPVTTELQ  F
Sbjct: 90  YPVTTELQASF 100

[Close]

BLAST of Lsi09G009030.1 vs. NCBI nr
Match: XP_022938574.1 (glutamate decarboxylase 1 [Cucurbita moschata] >KAG6579051.1 Glutamate decarboxylase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016575.1 Glutamate decarboxylase 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. NCBI nr
Match: KAF8015036.1 (hypothetical protein BT93_H0737 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. NCBI nr
Match: XP_022993766.1 (glutamate decarboxylase 1 [Cucurbita maxima])

HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. TAIR 10
Match: AT5G17330.1 (glutamate decarboxylase )

HSP 1 Score: 141.4 bits (355), Expect = 8.5e-34
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMPENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKLIM++INKNYVDMDE
Sbjct: 30  FKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. TAIR 10
Match: AT2G02010.1 (glutamate decarboxylase 4 )

HSP 1 Score: 137.9 bits (346), Expect = 9.4e-33
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           F+MPENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKL+M +INKNYVDMDE
Sbjct: 30  FEMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMESINKNYVDMDE 89

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 90  YPVTTELQNR 99

[Close]

BLAST of Lsi09G009030.1 vs. TAIR 10
Match: AT3G17760.1 (glutamate decarboxylase 5 )

HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMP++ +PK+AA+Q+INDELMLDGNPRLNLASFVTTWMEPECDKLIM ++NKNYVDMDE
Sbjct: 29  FKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDE 88

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 89  YPVTTELQNR 98

[Close]

BLAST of Lsi09G009030.1 vs. TAIR 10
Match: AT3G17760.2 (glutamate decarboxylase 5 )

HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           FKMP++ +PK+AA+Q+INDELMLDGNPRLNLASFVTTWMEPECDKLIM ++NKNYVDMDE
Sbjct: 29  FKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDE 88

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 89  YPVTTELQNR 98

[Close]

BLAST of Lsi09G009030.1 vs. TAIR 10
Match: AT1G65960.2 (glutamate decarboxylase 2 )

HSP 1 Score: 129.0 bits (323), Expect = 4.4e-30
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 88  FKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDE 147
           +++ ENSIPK+AA+QII DELMLDGNPRLNLASFVTTWMEPECDKLIM +INKNYVDMDE
Sbjct: 29  YEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDE 88

Query: 148 YPVTTELQVR 158
           YPVTTELQ R
Sbjct: 89  YPVTTELQNR 98

The following BLAST results are available for this feature:

BLAST of Lsi09G009030.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42521	1.2e-32	94.29	Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2	[more]
Q9ZPS3	1.3e-31	91.43	Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1	[more]
Q07346	1.3e-31	91.43	Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1	[more]
P54767	1.5e-30	87.14	Glutamate decarboxylase OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
Q9LSH2	7.3e-30	84.29	Glutamate decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=GAD5 PE=2 SV=1	[more]

BLAST of Lsi09G009030.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JX91	4.0e-31	98.57	Glutamate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111489676 PE=3 SV=1	[more]
A0A371EGV3	4.0e-31	79.07	Glutamate decarboxylase 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=GAD1 PE=4 S...	[more]
A0A5N5JH76	4.0e-31	95.77	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_027481 PE=4 SV=1	[more]
A0A6J1FEG7	4.0e-31	98.57	Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111444770 PE=3 SV=1	[more]
A0A068U0N0	5.2e-31	90.79	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036817001 PE=4 ...	[more]

BLAST of Lsi09G009030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3550917.1	4.8e-31	90.67	hypothetical protein DY000_02000715 [Brassica cretica]	[more]
KAB5516833.1	8.2e-31	95.77	hypothetical protein DKX38_027481 [Salix brachista]	[more]
XP_022938574.1	8.2e-31	98.57	glutamate decarboxylase 1 [Cucurbita moschata] >KAG6579051.1 Glutamate decarboxy...	[more]
KAF8015036.1	8.2e-31	98.57	hypothetical protein BT93_H0737 [Corymbia citriodora subsp. variegata]	[more]
XP_022993766.1	8.2e-31	98.57	glutamate decarboxylase 1 [Cucurbita maxima]	[more]

BLAST of Lsi09G009030.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17330.1	8.5e-34	94.29	glutamate decarboxylase	[more]
AT2G02010.1	9.4e-33	91.43	glutamate decarboxylase 4	[more]
AT3G17760.1	5.2e-31	84.29	glutamate decarboxylase 5	[more]
AT3G17760.2	5.2e-31	84.29	glutamate decarboxylase 5	[more]
AT1G65960.2	4.4e-30	85.71	glutamate decarboxylase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002129	Pyridoxal phosphate-dependent decarboxylase	PFAM	PF00282	Pyridoxal_deC	coord: 91..162 e-value: 3.0E-12 score: 46.0
None	No IPR available	GENE3D	4.10.280.50		coord: 73..123 e-value: 2.4E-19 score: 71.0
None	No IPR available	PANTHER	PTHR43321:SF26	GLUTAMATE DECARBOXYLASE	coord: 87..158
IPR010107	Glutamate decarboxylase	PANTHER	PTHR43321	GLUTAMATE DECARBOXYLASE	coord: 87..158
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 82..157

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi09G009030	Lsi09G009030	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G009030.1.exon.1	Lsi09G009030.1.exon.1	exon
Lsi09G009030.1.exon.2	Lsi09G009030.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G009030.1.CDS.1	Lsi09G009030.1.CDS.1	CDS
Lsi09G009030.1.CDS.2	Lsi09G009030.1.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi09G009030.1	Lsi09G009030.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006536	glutamate metabolic process
molecular_function	GO:0016830	carbon-carbon lyase activity
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding