Lsi09G009030 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATCAGCCTTCCAAAGCTGACCAAAAATCACTCTATTTAAGCCCCCCTTCTTCTTCATTAACCTCCATTGATCATCTTCTCATTCTTCTCTCTGCAACTAATTTCTTCCTCTCTTGCTTCCATCTCCATCCGCCATGGTTCTCTCCAAGACTGCTTCTCAGACAGATGTTTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTAATCGCGGATCAGATCGGTTCATTGTTTTCGTTTCTCTGTTTGATTTTAGATCTCGAAATTAATTTCTCCAATTCCTATCTCTGATTTGTGTTTTTCCGTGTGATTCTGTTTCTCGATCCATTTCATTTTCAATAATGTCCTGTAATTTGTTGTAGATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACGTTTCTCCATGTCTCTGTTAGCTTTAATCGAAAGATTAGATCGATTTTTCGTTCTATCGTTTCTCTCCATCAACGGTTACTTTCCTCTGGAAATTCTCCTGAACTGCGAATTGCAGCGTTCGGTCGTGGCGAAATTTCTACGACCGAGATTAAAAAAT CATCAGCCTTCCAAAGCTGACCAAAAATCACTCTATTTAAGCCCCCCTTCTTCTTCATTAACCTCCATTGATCATCTTCTCATTCTTCTCTCTGCAACTAATTTCTTCCTCTCTTGCTTCCATCTCCATCCGCCATGGTTCTCTCCAAGACTGCTTCTCAGACAGATGTTTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTAATCGCGGATCAGATCGGTTCATTATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACGTTTCTCCATGTCTCTGTTAGCTTTAATCGAAAGATTAGATCGATTTTTCGTTCTATCGTTTCTCTCCATCAACGGTTACTTTCCTCTGGAAATTCTCCTGAACTGCGAATTGCAGCGTTCGGTCGTGGCGAAATTTCTACGACCGAGATTAAAAAAT CATCAGCCTTCCAAAGCTGACCAAAAATCACTCTATTTAAGCCCCCCTTCTTCTTCATTAACCTCCATTGATCATCTTCTCATTCTTCTCTCTGCAACTAATTTCTTCCTCTCTTGCTTCCATCTCCATCCGCCATGGTTCTCTCCAAGACTGCTTCTCAGACAGATGTTTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTAATCGCGGATCAGATCGGTTCATTATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACGTTTCTCCATGTCTCTGTTAGCTTTAATCGAAAGATTAGATCGATTTTTCGTTCTATCGTTTCTCTCCATCAACGGTTACTTTCCTCTGGAAATTCTCCTGAACTGCGAATTGCAGCGTTCGGTCGTGGCGAAATTTCTACGACCGAGATTAAAAAAT HQPSKADQKSLYLSPPSSSLTSIDHLLILLSATNFFLSCFHLHPPWFSPRLLLRQMFPSTPPSLLDMCEPLSRGNFISLIADQIGSLFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQVRFSMSLLALIERLDRFFVLSFLSINGYFPLEILLNCELQRSVVAKFLRPRLKN Homology
BLAST of Lsi09G009030 vs. ExPASy Swiss-Prot
Match: Q42521 (Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32 Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy Swiss-Prot
Match: Q9ZPS3 (Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy Swiss-Prot
Match: Q07346 (Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy Swiss-Prot
Match: P54767 (Glutamate decarboxylase OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30 Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy Swiss-Prot
Match: Q9LSH2 (Glutamate decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=GAD5 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 7.3e-30 Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy TrEMBL
Match: A0A6J1JX91 (Glutamate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111489676 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy TrEMBL
Match: A0A371EGV3 (Glutamate decarboxylase 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=GAD1 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy TrEMBL
Match: A0A5N5JH76 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_027481 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy TrEMBL
Match: A0A6J1FEG7 (Glutamate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111444770 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. ExPASy TrEMBL
Match: A0A068U0N0 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036817001 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 5.2e-31 Identity = 69/76 (90.79%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of Lsi09G009030 vs. NCBI nr
Match: KAF3550917.1 (hypothetical protein DY000_02000715 [Brassica cretica]) HSP 1 Score: 145.6 bits (366), Expect = 4.8e-31 Identity = 68/75 (90.67%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Lsi09G009030 vs. NCBI nr
Match: KAB5516833.1 (hypothetical protein DKX38_027481 [Salix brachista]) HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31 Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of Lsi09G009030 vs. NCBI nr
Match: XP_022938574.1 (glutamate decarboxylase 1 [Cucurbita moschata] >KAG6579051.1 Glutamate decarboxylase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016575.1 Glutamate decarboxylase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. NCBI nr
Match: KAF8015036.1 (hypothetical protein BT93_H0737 [Corymbia citriodora subsp. variegata]) HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. NCBI nr
Match: XP_022993766.1 (glutamate decarboxylase 1 [Cucurbita maxima]) HSP 1 Score: 144.8 bits (364), Expect = 8.2e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. TAIR 10
Match: AT5G17330.1 (glutamate decarboxylase ) HSP 1 Score: 141.4 bits (355), Expect = 8.5e-34 Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Lsi09G009030 vs. TAIR 10
Match: AT2G02010.1 (glutamate decarboxylase 4 ) HSP 1 Score: 137.9 bits (346), Expect = 9.4e-33 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lsi09G009030 vs. TAIR 10
Match: AT3G17760.1 (glutamate decarboxylase 5 ) HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31 Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lsi09G009030 vs. TAIR 10
Match: AT3G17760.2 (glutamate decarboxylase 5 ) HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31 Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lsi09G009030 vs. TAIR 10
Match: AT1G65960.2 (glutamate decarboxylase 2 ) HSP 1 Score: 129.0 bits (323), Expect = 4.4e-30 Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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