Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATGTCAACTTTACGAAACCAAAATCAAAGTCTCTGTAAATGCTCCATTTGGGGATCTCTTGGGTGAATGCGGATAAGTGGCTCCCTGCTCCACCAACCACTACGTGGATTGTGCCATTCATAGTGCCTGAATATTGCGTTTTTTCTGCATTCACGCATTGATTCTACACCACCACCATACAAATATTATGTTAATCAACAAAAGATATAAAATTTAGATACACTAAATTAGATAAGATACGTAAAAATTGTAAGAGCTTATTTGAGAGTGATTTTAAAATTGTTAAAATTACTCAGAAGCATACTTTAATCACTCAATTAATTTAATTTTTTATTTAAACTTTTAAATGCAATGTTCAATCAAAAATTAGTTTTGAAGGATTAAAAACACATTTTACGGTAATTTTGAAAATGATAAAAGTGATTTTAACCATTTTAAAATCACTCCCAAACATTCTCAAAAAGGCCCTAACTCATCACCTATCTAAAAATCTATATGTTGTCCAAATCTTACCACAATTTAAAAATAACAAGGTTAAAATACTATTTTGCACTTTTTTTTCCGTCAATTTTAAATGTCCAATTTTAGTATACTTTTAATAAATCTTAAATTTTGAAGTTTAAGAGGAGTTACATTTATTTTTTTTAGTTTCCTTTTTCTGAAAATTGTATTTTCATTTATTAACATTTTTGTTTCTCTTGGGGAGATTACTTTCAGAATCCTTTTAGAAATCATGGTGAAAATTTTAAATCCAGTACTCAAATTTTGTTCTTATATTTGGAAATTGTATAATATTTTCTAGTGGTTTTAAAAAAGAAACCATTGATATGATAAGATATTGATTCTGAAATTGTTAAAATTAATTTTGTCATTTTCAAAATTGACATGATAAATATGTTATAAACAAACATTGAATTGATTTAGAGTGATCAAAAGTGTGTTTCGAGGTGATTTAAACAAAAAAAAAATGATTTTAACCAATTCAAAATCATTCTAAAACATCACCTACTCAGATCTAATTTTTTAGGTTTTAAAAAAAAATTGAGCCGGATTGAAAAACATTAATAAAAATAGATTAGGAAAAGTGACTTACCTGATAAACTGGACATGTTCTTTCGTAGTTATGGACATGGCCATAGAAGGCAATATCGACCCTATACTTCTGCCAGAGTTTCTGAAGGCTTTCCCTTCCCATGGGTTCCTCGAATGAGCCCTGCGAAGCATACCAATCGTTGGAAGAGTAGCCGAGCACACGATGAGCAGCAAATATCAACCAAGGTTGTTTTTGTCTATCCGCTGATGCAAGGCATTGCTCTATGAATCTGTACTGTTCTGAGCCCTCTCGCCAGTCATGTTCAGTGTCAACTATACAGAACCGGAACAATCCATAATCTGTCGAATACCTGATACCATAATTCAACAATGAAATGTTTCACAAATTGTATCAGATATTTAAAAAGAAAATGCTGATATCTTTCAGCATGATAGTTCTATGAATAGTGCTGAAATTGTCTGTTTTTTAAGTGTTGAAACTGTCTATTCAACAGACATATCATTTATTTCTTTGATTGTAGTCTTTATTTGTATCAAGAAATGTCGGGTAGCATTATAGTTAGATCCTGTTTGTCTTTTGGAACAGACAATTTAATAAATTAATTAACCCGATTGGATAATTAATTGCCACTATTCATCGATCCGCCTTATGCAGTTTGACTTCTGAATACACTAACTAAAGACGGCAGGGGATTATTTTAGTAATAATCTAAAATAAATAGGAATGGGATCCTCCAATAAAACAAGTGCGGCTTAAATACTTATTGGTCCTATTTTGGTTCATTTTAGTCGTCGTACTATCACAATGTTAATTTTGGTCTTTATACTTTTAACTTTGATTCATTTTGGTTTTTGTACTTTCAACATTTTGGTTCTTATACTTTTAAAAAGTGATCATTTTGGGTTCATTCATTTTCATTTTTATTTCATTTTTAAGGGATCAAAATGATCACTTTTCGAAAGTTTAAAGACCAAAATAAACCAAAGTTGAAAGTACGAGGACCAAAATGAACATTTTAAAAGTATAGAGATCCAAATGTACCAAAGTCGTAAGTATAGGAACTAAAATGAACATTTTGAAAATATAGAGACCAAAATGAACTAAAACCAAAAGTAAAGGAAACAAAGTAGTATTTAAACCAAAAAGTGCACAGTTAATTTGTGAAGCAACTTATAAAACTCAGCATTGCAACAGATTCATGAAATTGTTTAAAAGAATTCTTGGCTTACCAGAACTTTGCTCTGTTTTCAGCAGGAAAATAGAACATGGTCTCCGCCGGAACTCCACATTCCCCACCTGAATCCATGTTTGCATAGAAGGACCCAGAATTTGGCCAGTCACGCTCATGGTTACCACTGCAGGAGTGAAATTGGAGAGCCTTTAAGATTTATATAAGTAAATGGTCCAAAAATATCATACTCTAAGAATCAATCGAGTTATTGATATTGATAACCTTGCAACCATGTAGGGGACCCTAGATGCAATGGGCTCCACCTGTGCAGTAAATTGGTCCCACTCTGAGAGATACCCATTTGCATAAGATAGGTCTCCGATATGGAAAATAATGTCAATATTGTCCAAGTCTTTGATGAGCTGATCGGTGGTGTTCAATGCTCCAGGCTGATAGTTGCTATATTCATTTGAGCCATCACGTTGTCCCTGAAAGTCATGGTTAGTGTTACAAATCTTTTTCCAGAGCCTTGTTTGAAAAAGTTTATCTTCATGAGATTGCCATTTACCACAAGCAGAAAGTGAGCAACTCAGAAAATATTCGATATGGAAAGGGCTGCATTTGAATTCTAAGTTCTTATCAAGTTTGGATGATTAAGTTATATCTTGTTACAGTTACTAAAGAAACACTGGCTACTGAAATGGCAGAACAGTGAAGGATTAGGTTGTTCCTTTTCCAAAAATCATTTGTATGACAACCAATTTTCTTTGAATTAATCAAAATGTTAACTGCCCCTCAAGGAGCTCAAATGTGAAGGCAATTGTAGAAGATCCTCTCAGGAAGATATAGATATATGAAGTCAATACAAGAAATTTAAATAGACCACGAAGAGGTGGCTAAATTAAGTTAATTAACTGAAGTTCAGAAGTATCATTTTTGTTTAATTTCGATATTTCCTTCTGAATTATAAACCTCATTCTCATTTTGGTTATAATCAATGTAATATAAAAATTTTATGGTACCTTCCCCATATCACCAAATATAATGACACGCTGTGATGATTCTTCTCCAGGATGCGGTGATGACTTGAATGAATAGCTTTTGCTCCAAATATATGATCCACTAAGCAAGCGATGACCCATTCTGTACGTATACCTGTTTAAACCAACGTGAGAATCCTTAGTGCAAATGAACAAGATTTTAATAGTGGTTCAGACCAATAGCTTCAACCATTGATACATACACAGTGTTTGGCCATAAGTTCTGTAGGAAACTCGTATGAAAGAAACCAGGATCACGCCAACCAACAGTTCGTGCAGGTGCATCTTTAATCAAAGAAAATAGCATCATGCAACAAGTCAAACATTCGAAACCAGTGTTCAGCCGGAATAAAAGAGTAAACATAATACGATTTGCAGAGTAATTATCTCAAGATTAGAATCGAAGAAAGTCATCAATCCATTCTGGAAGAAGTCTTAACTACCTTTCTAAAAGAATTGTAGATATTCATTATCCTGACGAGACTATGAAAGAAAGACATTGGTAGTGTTCTAAGAAGCCACTTGGATGGAATTGACAACTCATTTCCAGGTTAATAGCCAAAAGCTCAGGACACCAAGATGAGAGAATGGAAATTTTACGAGTTGACTAATATAAGGCATAGCCTCTGTTTTTAAGTATATTACTAATTAAAGAACGGAAGCAGCAAAACTTCAACAAGGCAGCGACATAAATACCTAGAGTGGCCAAGAGATAGGTGATCTATATGATCCAAAACTAATTCTCCAATGAATTTGTGGTTAGTTGCAATTGTTTGGTATTAAAAATCAACTAGACGCAAATTGCAAGTGAAACGTAAATGCAACACACACACGCAAGTTATTAGTTGAACCTTTTTGAAACAGTATTCTAATTGAGGTTTAAGAAAATGTCTGAAAAGTTTCAACAGACATCTTGGTATTTTTTATTTATTTTTTTGTTTCAAGATAATATTAAGTTGTTAACTTAGATGGTGCAGTCTAGCTGACGAGTTGCTCGAATGAATCATACCACACATGCTGTTCCTACTAAATGTCAGTGTGCCAGCTGGGGATCTCGTCTGTGTCTCCCCTTCTAGACCCCATTCAACAAATGGAGTAGCTTCACTTATATCGTACCCGCTTGTCCAGGTTACTGTCATCTGCAAAAATCAAAAGACCATCGTTCTGCTACTAAGCTACTTAAATCTTGCTAACAACTACAGAATATGTAACTTTCTTCTCAAGTATGTTGGCAGCAAATAGGAGTTACAGTTTGAAGACATCTTTTAACGTAAGTTAGCAACGAATATCCAATTGAATGAAGTTTTCGTTACAGTTTCAACAATAACTAAAGAATCACGGTGATGTGGATTAGAAAGGAACAAGAAGTTTTCAAACTGCAGGCCATTATTGACTTTTTTTGTGTCCTCTATCAAAAGTTTCCCACAATAAAATGAAAGGAAATATCAGGATATTGATCAACTTACTTCATTCCACAGTTTGCCATGTGCAAGGCGAGGAAACAATGGTGCTTTAGGATTCTTAAATGA mRNA sequence ATGATTTATGGACATGGCCATAGAAGGCAATATCGACCCTATACTTCTGCCAGAGTTTCTGAAGGCTTTCCCTTCCCATGGGTTCCTCGAATGAGCCCTGCGAAGCATACCAATCGTTGGAAGAGTAGCCGAGCACACGATGAGCAGCAAATATCAACCAAGAACGGAAGCAGCAAAACTTCAACAAGGCAGCGACATAAATACCTAGAGTGGCCAAGAGATAGTGTGCCAGCTGGGGATCTCGTCTGTGTCTCCCCTTCTAGACCCCATTCAACAAATGGAGTAGCTTCACTTATATCGTACCCGCTTGTCCAGTTTGCCATGTGCAAGGCGAGGAAACAATGGTGCTTTAGGATTCTTAAATGA Coding sequence (CDS) ATGATTTATGGACATGGCCATAGAAGGCAATATCGACCCTATACTTCTGCCAGAGTTTCTGAAGGCTTTCCCTTCCCATGGGTTCCTCGAATGAGCCCTGCGAAGCATACCAATCGTTGGAAGAGTAGCCGAGCACACGATGAGCAGCAAATATCAACCAAGAACGGAAGCAGCAAAACTTCAACAAGGCAGCGACATAAATACCTAGAGTGGCCAAGAGATAGTGTGCCAGCTGGGGATCTCGTCTGTGTCTCCCCTTCTAGACCCCATTCAACAAATGGAGTAGCTTCACTTATATCGTACCCGCTTGTCCAGTTTGCCATGTGCAAGGCGAGGAAACAATGGTGCTTTAGGATTCTTAAATGA Protein sequence MIYGHGHRRQYRPYTSARVSEGFPFPWVPRMSPAKHTNRWKSSRAHDEQQISTKNGSSKTSTRQRHKYLEWPRDSVPAGDLVCVSPSRPHSTNGVASLISYPLVQFAMCKARKQWCFRILK
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 29..69 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lsi06G016400.1.exon.1 | Lsi06G016400.1.exon.1 | exon |
| Lsi06G016400.1.exon.2 | Lsi06G016400.1.exon.2 | exon |
| Lsi06G016400.1.exon.3 | Lsi06G016400.1.exon.3 | exon |
| Lsi06G016400.1.exon.4 | Lsi06G016400.1.exon.4 | exon |
| Lsi06G016400.1.exon.5 | Lsi06G016400.1.exon.5 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lsi06G016400.1.CDS.1 | Lsi06G016400.1.CDS.1 | CDS |
| Lsi06G016400.1.CDS.2 | Lsi06G016400.1.CDS.2 | CDS |
| Lsi06G016400.1.CDS.3 | Lsi06G016400.1.CDS.3 | CDS |
| Lsi06G016400.1.CDS.4 | Lsi06G016400.1.CDS.4 | CDS |
| Lsi06G016400.1.CDS.5 | Lsi06G016400.1.CDS.5 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lsi06G016400.1 | Lsi06G016400.1-protein | polypeptide |
|
