Lcy11g020450.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy11g020450.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	L10-interacting MYB domain-containing protein
Location	Chr11: 48169903 .. 48172941 (-)
Sequence length	3039
RNA-Seq Expression	Lcy11g020450.1
Synteny	Lcy11g020450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGAAGTTAGAACTACTTGTATGTTGATGATTGTTGTTATGTGCAATGCAATGAATGCAATGCTTGTTACCTAATTTCTTTTGTACGTGTTTTTAGATGAACCGTCCAGGTACTCAATCGAGGCGACCATCCAATCCATCCGTGGAACAGCAAGCGAGAGCTAAGCGGATGACTAACCTCACAAAGTTACTTGCGGACTTGATGATTGAACAGTTGCAGAAAGGGCGTAAAGAAAAGAACACTCAAGGGAGGATGGAATGGAATTTTATATGTGATGAGTTTTGCAGGAGAACGACTTTGGCATGGGATAAAGAACAACTGCAGAACCGACGTTCCATTCTGAACAAGCAGTACCTTACGGTGAAATCGACACTTCGATGGGATGACTTCGAGTTTCATGAAAGAACTAGGACTATTGTGGCCACAGAGGAAGCATGGAATGAATACTTCATTGTCTATAATGCAGATGCATCCTGATGCGGAGCCTATAAAAACCAGTGGTTGTTCAATGTACAAAGAGCTATGCATAATCTTTGGTAAGTTAGATCACGCAATCAGACGATTCTTGGTCGAACCCTGATGGAGTCGACGAAGTTGCAGGTGGTAAAGAAAGAAGTCAGCCTTCCACCCCTAGTTCGTCAAATCGTTGCAAAGAGGGAAAGAGCCGATCGAGGATTCGACCGAGGGGGGAAGGGCATTGCTGATTCAACTCCAGAGCAGATTCACAGAGCCTATTCCAGTTGATTCATGTACATATACTGTAAGAAGAAGAAATAGAATCATTGCAGCCACTCCCAACAACTAATTGAAAAAGAAACTAAGCAAGCATTACTCATGGCAGTCCTTTGTCATATTGACATTGGCTTGGCTTTGCTTGTATTCATTTTGGAAATTGCAAGGGACCTGGAAGAAAGATAGCTAAAATAGGACTCTTCTCACTTTTACAAGTCTCATTCCCTAAAACCATAAGTTAATTTATAGCATATCACTATATCAGAATTTGATGTTCATTGGGTGATGTAACTGGAAGTTCAAATTCTCAAGGGGGGCTGACTGCAATGCTTCAATGGTGAGTGAGATTACTGAAAGCAGGAACCAACTGCATGACAACATTTCTAGGTTCGATGTTTAATCGCATTGCAAAAGATAAACTTACGAGACAAATTCAGGGATTACAAGAGAAAAATGATCATGTTTCCTTTGGTGGGGCCTTCTTTGCAGCCTCTGCTGCTGCTTTTTCTGCTTCAATCTCGGCGACAATTGCATCGATTTCAGCCTCATCTAATTGTTTCAAACCATGTTCCTTTGTCATCACAGCAACCTCTATGTTCTTTCCTCCACTCTCAACAACCTACAAATTCAATTGAGTCCATGCAAGTAAGTCACCAAGTACCAAAGAAAAAATCTTAAGAAACGCATATCCAGCTCACACATTTGGTATGTTTATGGCAGCAGCTCTGAAGAATGAGGGACAATTGTAAAATCAGATGTTTTAACTTAGGACATTGAATCAATGACCGATATTCATAATGGCCTTTAGTCCGATTTCTCAAGATCAGTGAAATTAACCTAGAAGACATCAAGACTAAGCAATAATAAACCTATTTTGGCACTTCTAGTTGTTTAGATTTGGAATGTCTATTTGTAGAACAAAAACTTGTGAAAACATACTTAGATGACTGACTTTTGAAAGTCGTTTCTTCTTCCGGGTGTGTTCTCATAAGTGACCTATTTTGCTGAAACCTTCCAGAATTGTTTCTAAGACAACTTTTTGAATTGCCTTCTAATGTTTTATATCCTCTGAACATAGATCCAAAGAAACTTTCGAGTAAAGGATCAGGTATACAACCAAGGGGAACCGTGTTATAACTCTGTAACCCTATTAGTGGATTAGGTATATAACTCTGTAAAGGATACGTATTACAATTTTGACTGCTTAAAGACCAAATTGGTCCCTAGGGTAAGAAATAACCAGTTACAGCAAGGGATGCACTCAGTATAGCAAGAAATAGCCAAATACTTGACTGCTTAATAACCAAATTCCTTTTTTCTTTGATGAATGAATGGCCATTAATAAAGATAGACGAAAGTACAAAGGAGGCCACAAAAACAAAAATCAGCCGAACCAACACAGGGACTTCAAAAAAACATGCTGGTTAAATGCTATAATTTTTTTTAATGAGAAACCAAGACTTCTTTGAGAAACATGAAAGAGCATACAAGAACATACAAAAGAAGCGGCCCCACAAAAAAGAGTTCCAAAACTAACTAGTACACAGACTCCAATTTAGGAGAATAAGACCTAACTAATAATGCGGAGAGACTGAAGCCCAAAGTGAGACATCAAATCTCATAATACCTCACACCTTAAACTTGGACCTCTCTAAACTCCTAAAAATACAACCATTCCTCAAGCCATAACCCCCCATAAACAGCAAAAATACAAGTCTGCCAGAGGACTCCTCCTTTATCCCGAAAATGCTAAATGCTATCATTAAGCATTAGTTATAATACAACCACGACTTATTTTCTTTTTTACACATACTTCAGTTGAAAATTAATCAGTTTTTACAGGTTCCAAATCCTGCTAATTGTCAAAGTCTCCTATAATCAAGTATCAGATGATTCAGAACCTGTCACCACACTACACACTAAAGTAGCTTCATCTAAATCAAACTTCTGTATCCAATCAAGGAAATATCAAACACCCATTACAAGCCACAATCCAACAATTACTTGAGTACATTACATGCAAACCATCTGTCTTTATAGAATAAGGAACAGATAATGTAAGCAATTAACTTTGAAAATTCCATTCTGCAATATGTAGATGGGTTTTGGTAAGAAACCGAGCTTACATCGATAAGAAATGAAAGAATAACAAGGGCATACAAAAAACAAACCCGGCAAAAAGGAAATCCCATTAAACTACAGAAAGAGACTCACAGTTATGGTAGATGGGTTAATATGATCAATATGAAAAAAATACTTGAAATATCAACCCTGAAGAAGAACGCCCTATTTACAAAATGCAGGT

mRNA sequence

CAAAGAAGTTAGAACTACTTGTATGTTGATGATTGTTGTTATGTGCAATGCAATGAATGCAATGCTTGTTACCTAATTTCTTTTGTACGTGTTTTTAGATGAACCGTCCAGGTACTCAATCGAGGCGACCATCCAATCCATCCGTGGAACAGCAAGCGAGAGCTAAGCGGATGACTAACCTCACAAAGTTACTTGCGGACTTGATGATTGAACAGTTGCAGAAAGGGCGTAAAGAAAAGAACACTCAAGGGAGGATGGAATGGAATTTTATATGTGATGAGTTTTGCAGGAGAACGACTTTGGCATGGGATAAAGAACAACTGCAGAACCGACGTTCCATTCTGAACAAGCAGTACCTTACGGTGAAATCGACACTTCGATGGGATGACTTCGAGTTTCATGAAAGAACTAGGACTATTGTGGCCACAGAGGAAGCATGGAATGAATACTTCATTGTCTATAATGCAGATGCATCCTGATGCGGAGCCTATAAAAACCAGTGGTTGTTCAATGTACAAAGAGCTATGCATAATCTTTGGTAAGTTAGATCACGCAATCAGACGATTCTTGGTCGAACCCTGATGGAGTCGACGAAGTTGCAGGTGGTAAAGAAAGAAGTCAGCCTTCCACCCCTAGTTCGTCAAATCGTTGCAAAGAGGGAAAGAGCCGATCGAGGATTCGACCGAGGGGGGAAGGGCATTGCTGATTCAACTCCAGAGCAGATTCACAGAGCCTATTCCAGTTGATTCATGTACATATACTGTAAGAAGAAGAAATAGAATCATTGCAGCCACTCCCAACAACTAATTGAAAAAGAAACTAAGCAAGCATTACTCATGGCAGTCCTTTGTCATATTGACATTGGCTTGGCTTTGCTTGTATTCATTTTGGAAATTGCAAGGGACCTGGAAGAAAGATAGCTAAAATAGGACTCTTCTCACTTTTACAAGTCTCATTCCCTAAAACCATAAGTTAATTTATAGCATATCACTATATCAGAATTTGATGTTCATTGGGTGATGTAACTGGAAGTTCAAATTCTCAAGGGGGGCTGACTGCAATGCTTCAATGGTGAGTGAGATTACTGAAAGCAGGAACCAACTGCATGACAACATTTCTAGGTTCGATGTTTAATCGCATTGCAAAAGATAAACTTACGAGACAAATTCAGGGATTACAAGAGAAAAATGATCATGTTTCCTTTGGTGGGGCCTTCTTTGCAGCCTCTGCTGCTGCTTTTTCTGCTTCAATCTCGGCGACAATTGCATCGATTTCAGCCTCATCTAATTGTTTCAAACCATGTTCCTTTGTCATCACAGCAACCTCTATGTTCTTTCCTCCACTCTCAACAACCTACAAATTCAATTGAGTCCATGCAAGTAAGTCACCAAGTACCAAAGAAAAAATCTTAAGAAACGCATATCCAGCTCACACATTTGGTATGTTTATGGCAGCAGCTCTGAAGAATGAGGGACAATTGTAAAATCAGATGTTTTAACTTAGGACATTGAATCAATGACCGATATTCATAATGGCCTTTAGTCCGATTTCTCAAGATCAGTGAAATTAACCTAGAAGACATCAAGACTAAGCAATAATAAACCTATTTTGGCACTTCTAGTTGTTTAGATTTGGAATGTCTATTTGTAGAACAAAAACTTGTGAAAACATACTTAGATGACTGACTTTTGAAAGTCGTTTCTTCTTCCGGGTGTGTTCTCATAAGTGACCTATTTTGCTGAAACCTTCCAGAATTGTTTCTAAGACAACTTTTTGAATTGCCTTCTAATGTTTTATATCCTCTGAACATAGATCCAAAGAAACTTTCGAGTAAAGGATCAGGTATACAACCAAGGGGAACCGTGTTATAACTCTGTAACCCTATTAGTGGATTAGGTATATAACTCTGTAAAGGATACGTATTACAATTTTGACTGCTTAAAGACCAAATTGGTCCCTAGGGTAAGAAATAACCAGTTACAGCAAGGGATGCACTCAGTATAGCAAGAAATAGCCAAATACTTGACTGCTTAATAACCAAATTCCTTTTTTCTTTGATGAATGAATGGCCATTAATAAAGATAGACGAAAGTACAAAGGAGGCCACAAAAACAAAAATCAGCCGAACCAACACAGGGACTTCAAAAAAACATGCTGGTTAAATGCTATAATTTTTTTTAATGAGAAACCAAGACTTCTTTGAGAAACATGAAAGAGCATACAAGAACATACAAAAGAAGCGGCCCCACAAAAAAGAGTTCCAAAACTAACTAGTACACAGACTCCAATTTAGGAGAATAAGACCTAACTAATAATGCGGAGAGACTGAAGCCCAAAGTGAGACATCAAATCTCATAATACCTCACACCTTAAACTTGGACCTCTCTAAACTCCTAAAAATACAACCATTCCTCAAGCCATAACCCCCCATAAACAGCAAAAATACAAGTCTGCCAGAGGACTCCTCCTTTATCCCGAAAATGCTAAATGCTATCATTAAGCATTAGTTATAATACAACCACGACTTATTTTCTTTTTTACACATACTTCAGTTGAAAATTAATCAGTTTTTACAGGTTCCAAATCCTGCTAATTGTCAAAGTCTCCTATAATCAAGTATCAGATGATTCAGAACCTGTCACCACACTACACACTAAAGTAGCTTCATCTAAATCAAACTTCTGTATCCAATCAAGGAAATATCAAACACCCATTACAAGCCACAATCCAACAATTACTTGAGTACATTACATGCAAACCATCTGTCTTTATAGAATAAGGAACAGATAATGTAAGCAATTAACTTTGAAAATTCCATTCTGCAATATGTAGATGGGTTTTGGTAAGAAACCGAGCTTACATCGATAAGAAATGAAAGAATAACAAGGGCATACAAAAAACAAACCCGGCAAAAAGGAAATCCCATTAAACTACAGAAAGAGACTCACAGTTATGGTAGATGGGTTAATATGATCAATATGAAAAAAATACTTGAAATATCAACCCTGAAGAAGAACGCCCTATTTACAAAATGCAGGT

Coding sequence (CDS)

ATGAACCGTCCAGGTACTCAATCGAGGCGACCATCCAATCCATCCGTGGAACAGCAAGCGAGAGCTAAGCGGATGACTAACCTCACAAAGTTACTTGCGGACTTGATGATTGAACAGTTGCAGAAAGGGCGTAAAGAAAAGAACACTCAAGGGAGGATGGAATGGAATTTTATATGTGATGAGTTTTGCAGGAGAACGACTTTGGCATGGGATAAAGAACAACTGCAGAACCGACGTTCCATTCTGAACAAGCAGTACCTTACGGTGAAATCGACACTTCGATGGGATGACTTCGAGTTTCATGAAAGAACTAGGACTATTGTGGCCACAGAGGAAGCATGGAATGAATACTTCATTGTCTATAATGCAGATGCATCCTGA

Protein sequence

MNRPGTQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRRTTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEYFIVYNADAS

Homology

[Close]

BLAST of Lcy11g020450.1 vs. ExPASy TrEMBL
Match: A0A2N9J0Q6 (Myb_DNA-bind_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59019 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24
Identity = 60/114 (52.63%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SRR  +   EQ +RA+  T+LTK+LADLMI Q+QKG + KN+  +  W +ICDEF ++
Sbjct: 6   TRSRREPSQQEEQLSRARWTTSLTKILADLMINQVQKGNRHKNSFSKKAWRYICDEFYKK 65

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEYFI 120
           T L WDKEQL+NR ++L +QY+TVKS L   DF + E T +IVA +EAW EY +
Sbjct: 66  TGLKWDKEQLKNRYAVLRRQYITVKSLLDQSDFNWDEFTGSIVAKDEAWAEYIM 119

[Close]

BLAST of Lcy11g020450.1 vs. ExPASy TrEMBL
Match: A0A2P5EUZ1 (Myb/SANT-like domain containing protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_149070 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+ +R  +   EQQ+RA+  T LTK+LADLM+EQ+ KG ++ N+ G+  W ++CD+F R+
Sbjct: 39  TRCKREPSQQQEQQSRARWTTFLTKILADLMVEQVYKGNRQNNSFGKKAWQYMCDDFYRK 98

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR ++L +QY TVKS L   DF   E T TIVA+E+AW EY
Sbjct: 99  TGLKWDKEQLKNRYAVLRRQYTTVKSLLDRGDFTLDESTGTIVASEKAWTEY 150

[Close]

BLAST of Lcy11g020450.1 vs. ExPASy TrEMBL
Match: A0A6A1UNL7 (Myb_DNA-bind_3 domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR8G015534 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 58/112 (51.79%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SR       EQQ+RA+  T+L+K+LAD+MI+Q+QKG + K + G+  W +ICD F +R
Sbjct: 6   TRSRSQLPQQQEQQSRARWTTSLSKILADIMIDQVQKGNRRKKSFGKKAWRYICDGFYKR 65

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR ++L +QY+TVKS L  DDF + E T +I+A +EAW EY
Sbjct: 66  TGLKWDKEQLKNRYAVLRRQYVTVKSLLDQDDFSWDESTASIMAKDEAWMEY 117

[Close]

BLAST of Lcy11g020450.1 vs. ExPASy TrEMBL
Match: A0A5B7AUX4 (Myb_DNA-bind_3 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_029299 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 56/115 (48.70%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 6   TQSRRPSN-PSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCR 65
           T+SRRP+  P  EQQ+RAK  T+LTK+LA+LM++Q+Q+G ++ N+ G+  W ++CDEF +
Sbjct: 6   TRSRRPATMPQPEQQSRAKWTTSLTKILAELMVDQVQRGNRQNNSFGKKAWKYMCDEFYK 65

Query: 66  RTTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEYFI 120
           +T L WDKEQL+NR ++L KQ++ VKS L   DF++ E T  I+A +E W+ Y +
Sbjct: 66  KTGLKWDKEQLKNRYAVLRKQHVIVKSLLDQSDFKWDEATGAIMAMDEVWDRYIM 120

[Close]

BLAST of Lcy11g020450.1 vs. ExPASy TrEMBL
Match: A0A6P3Z1L6 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107408362 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.2e-23
Identity = 54/112 (48.21%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SRR      EQQ RA+   +LTK+LADLM++Q+ KG ++ N+ G+  W ++CDEF ++
Sbjct: 6   TRSRRQPPQHQEQQTRARWTASLTKILADLMVDQVHKGNRQNNSFGKKAWKYMCDEFYKK 65

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           + L WDKEQL+NR ++L +QY+TVKS L   DF + E T T++A+++AW EY
Sbjct: 66  SGLKWDKEQLKNRYAVLRRQYITVKSLLDQSDFTWDESTGTLIASDDAWTEY 117

[Close]

BLAST of Lcy11g020450.1 vs. NCBI nr
Match: XP_028775347.1 (L10-interacting MYB domain-containing protein-like [Prosopis alba])

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SRR      EQQ+RA+  T+LTK+L DLM++Q+ KG K+ N+  +  W +ICDEF  +
Sbjct: 13  TRSRRLPPQQQEQQSRARWTTSLTKILVDLMVDQVHKGNKQSNSFNKKAWKYICDEFYSK 72

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR S+L KQY TVKS L   DF + E T +I+A EE W EY
Sbjct: 73  TGLKWDKEQLKNRYSVLRKQYTTVKSILERSDFNWDEATGSIIAEEEVWAEY 124

[Close]

BLAST of Lcy11g020450.1 vs. NCBI nr
Match: XP_028774499.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Prosopis alba])

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SRR      EQQ+RA+  T+LTK+L DLM++Q+ KG K+ N+  +  W +ICDEF  +
Sbjct: 13  TRSRRLPPQQQEQQSRARWTTSLTKILVDLMVDQVHKGNKQSNSFNKKAWKYICDEFYSK 72

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR S+L KQY TVKS L   DF + E T +I+A EE W EY
Sbjct: 73  TGLKWDKEQLKNRYSVLRKQYTTVKSILERSDFNWDEATGSIIAEEEVWAEY 124

[Close]

BLAST of Lcy11g020450.1 vs. NCBI nr
Match: PON89364.1 (Myb/SANT-like domain containing protein, partial [Trema orientale])

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+ +R  +   EQQ+RA+  T LTK+LADLM+EQ+ KG ++ N+ G+  W ++CD+F R+
Sbjct: 39  TRCKREPSQQQEQQSRARWTTFLTKILADLMVEQVYKGNRQNNSFGKKAWQYMCDDFYRK 98

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR ++L +QY TVKS L   DF   E T TIVA+E+AW EY
Sbjct: 99  TGLKWDKEQLKNRYAVLRRQYTTVKSLLDRGDFTLDESTGTIVASEKAWTEY 150

[Close]

BLAST of Lcy11g020450.1 vs. NCBI nr
Match: XP_028774500.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Prosopis alba] >XP_028774501.1 L10-interacting MYB domain-containing protein-like isoform X2 [Prosopis alba])

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SRR      EQQ+RA+  T+LTK+L DLM++Q+ KG K+ N+  +  W +ICDEF  +
Sbjct: 6   TRSRRLPPQQQEQQSRARWTTSLTKILVDLMVDQVHKGNKQSNSFNKKAWKYICDEFYSK 65

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR S+L KQY TVKS L   DF + E T +I+A EE W EY
Sbjct: 66  TGLKWDKEQLKNRYSVLRKQYTTVKSILERSDFNWDEATGSIIAEEEVWAEY 117

[Close]

BLAST of Lcy11g020450.1 vs. NCBI nr
Match: XP_023924033.1 (L10-interacting MYB domain-containing protein-like [Quercus suber])

HSP 1 Score: 118.6 bits (296), Expect = 3.8e-23
Identity = 60/112 (53.57%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 6   TQSRRPSNPSVEQQARAKRMTNLTKLLADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRR 65
           T+SRR   P  + QARA+  T+LTK+LADLMI Q+QKG ++KN+  +  W +I DEF ++
Sbjct: 6   TRSRR-EPPQQDDQARARWTTSLTKILADLMINQVQKGNRQKNSFSKKAWRYISDEFYKK 65

Query: 66  TTLAWDKEQLQNRRSILNKQYLTVKSTLRWDDFEFHERTRTIVATEEAWNEY 118
           T L WDKEQL+NR ++L +QY+TVKS L   DF + E T TI+A +EAW EY
Sbjct: 66  TGLKWDKEQLKNRYAVLRRQYITVKSLLDQSDFSWDEFTGTIIAKDEAWTEY 116

[Close]

BLAST of Lcy11g020450.1 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 4.5e-06
Identity = 28/86 (32.56%), Postives = 42/86 (48.84%), Query Frame = 0


Query: 32  LADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRRTTLAWDKEQLQNRRSILNKQYLTVKS 91
           L DLM+EQ+ +G K   T     W  + + F  +  L  D   L+NR  +L K+   + +
Sbjct: 542 LIDLMLEQVSRGNKIGETFTEQAWADMAESFNAKFGLQTDMFMLENRYILLMKERDDINN 601

Query: 92  TLRWDDFEFHERTRTIVATEEAWNEY 118
            L  D F +    +TIVA +E W  Y
Sbjct: 602 ILNLDGFTWDVEKQTIVAEDEYWEAY 627

[Close]

BLAST of Lcy11g020450.1 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 4.5e-06
Identity = 28/86 (32.56%), Postives = 42/86 (48.84%), Query Frame = 0


Query: 32  LADLMIEQLQKGRKEKNTQGRMEWNFICDEFCRRTTLAWDKEQLQNRRSILNKQYLTVKS 91
           L DLM+EQ+ +G K   T     W  + + F  +  L  D   L+NR  +L K+   + +
Sbjct: 519 LIDLMLEQVSRGNKIGETFTEQAWADMAESFNAKFGLQTDMFMLENRYILLMKERDDINN 578

Query: 92  TLRWDDFEFHERTRTIVATEEAWNEY 118
            L  D F +    +TIVA +E W  Y
Sbjct: 579 ILNLDGFTWDVEKQTIVAEDEYWEAY 604

The following BLAST results are available for this feature:

BLAST of Lcy11g020450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g020450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9J0Q6	2.9e-24	52.63	Myb_DNA-bind_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU...	[more]
A0A2P5EUZ1	1.4e-23	51.79	Myb/SANT-like domain containing protein (Fragment) OS=Trema orientale OX=63057 G...	[more]
A0A6A1UNL7	1.8e-23	51.79	Myb_DNA-bind_3 domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR8...	[more]
A0A5B7AUX4	1.8e-23	48.70	Myb_DNA-bind_3 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_...	[more]
A0A6P3Z1L6	3.2e-23	48.21	L10-interacting MYB domain-containing protein-like isoform X2 OS=Ziziphus jujuba...	[more]

BLAST of Lcy11g020450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028775347.1	2.9e-23	52.68	L10-interacting MYB domain-containing protein-like [Prosopis alba]	[more]
XP_028774499.1	2.9e-23	52.68	L10-interacting MYB domain-containing protein-like isoform X1 [Prosopis alba]	[more]
PON89364.1	2.9e-23	51.79	Myb/SANT-like domain containing protein, partial [Trema orientale]	[more]
XP_028774500.1	2.9e-23	52.68	L10-interacting MYB domain-containing protein-like isoform X2 [Prosopis alba] >X...	[more]
XP_023924033.1	3.8e-23	53.57	L10-interacting MYB domain-containing protein-like [Quercus suber]	[more]

BLAST of Lcy11g020450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.1	4.5e-06	32.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	4.5e-06	32.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 28..117 e-value: 2.6E-17 score: 63.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 5..118
None	No IPR available	PANTHER	PTHR47584:SF9	L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE	coord: 5..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy11g020450	Lcy11g020450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g020450.1.exon1	Lcy11g020450.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g020450.1.utr3p1	Lcy11g020450.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g020450.1.cds1	Lcy11g020450.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g020450.1.utr5p1	Lcy11g020450.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy11g020450.1	Lcy11g020450.1-protein	polypeptide