Lcy04g009280.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy04g009280.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Tubulin beta chain
Location	Chr04: 40519632 .. 40520963 (+)
Sequence length	1244
RNA-Seq Expression	Lcy04g009280.1
Synteny	Lcy04g009280.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTTCTCCTTTATAAATCATTCCTCTCTCTCTCCATCTCTGTAAAAAGATAAGCTCTCAATCTCTCTCCGTCCCTACAACTTCCCATTTATTTCCCTCCCTCTTCTTCCTCTCCCTCGCATTTCTCACAGAACCCATTTCTTGTTTCTTCGACTTCTTCTGCGAAAATGAGAGAGATCCTTCACGTTCAGGGTGGGCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTCGTTTGCGCCGAGCACGGCATCGACACCACCGGAAAGTACGGGGGTGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCCAGTTGCGGGAGGTATGTGCCTCGCGCTGTTCTTATGGATCTTGAGCCTGGTACTATGGACAGTATCAGATCTGGCCTTTATGGCCAGATCTTCAGGCCGGATAACTTTGTTTTCGGTCAGTCTGGGGCTGGAAACAACTGGGCCAAAGGGCATTACACTGAAGGTGCCGAGCTTATTGATTCCGTGCTCGATGTCGTTCGGAAGGAGGCGGAGAACTGTGATTGCTTGCAAGGTTTGCTCTCGATCTGCCGCTGTTTCTGTTTCTCTGTCTATTTTTGTGATTTTGGCTGAACATTGGTGTGGTTTTGGGTTCTTTTTAGGGTTTCAGGTGTGCCATTCTCTAGGAGGTGGAACTGGATCTGGAATGGGAACTCTTCTGATTTCGAAGATCAGAGAAGAATACCCGGACAGGATGATGCTTACCTTCTCTGTCTTTCCATCTCCCAAGGTCTCTGATACTGTTGTTGAGCCTTACAATGCAACTCTCTCAGTTCATCAACTGGTTGAAAATGCGGATGAGTGCATGGTTCTTGACAATGAAGCTCTGTATGATATCTGCTTCCGTACCCTCAAGCTCACCACTCCTAGCTGTAAGATATTTATTCCTTTCAACGTCTGGAACTTTCTTCTTTACTTTGTACTCACTACTTGAGTAGTATGCTGTCTCGTTGTTTCATGGCACGTATTGATTTAAATACACCGAGTTAAAGCCGATCTGTGGGTAGTTGTAAATTATTGATGAGATCTGGTACATGAACTATGTTAGTCTATTTATCGGGGAAAAAAGAAGATCCATGTTAGTCTAGTGATTTGAAAGTGCATCTTAACTTCAAGGTGTTTTGAAAACAGGTTGGTATAATTCATTCATCCATACTAATATGGTTTTACGCTTGTGGTTGAAACAGTTGGCGATTTGAACCATTTGATCTCTGCAACAATGTCCGGAGTGACCTGTTGTTTGAGATTCCCTGGACAACTCAACTCTGATCTCAGAAAG

mRNA sequence

CTCTCTCTCTTCTCCTTTATAAATCATTCCTCTCTCTCTCCATCTCTGTAAAAAGATAAGCTCTCAATCTCTCTCCGTCCCTACAACTTCCCATTTATTTCCCTCCCTCTTCTTCCTCTCCCTCGCATTTCTCACAGAACCCATTTCTTGTTTCTTCGACTTCTTCTGCGAAAATGAGAGAGATCCTTCACGTTCAGGGTGGGCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTCGTTTGCGCCGAGCACGGCATCGACACCACCGGAAAGTACGGGGGTGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCCAGTTGCGGGAGGTATGTGCCTCGCGCTGTTCTTATGGATCTTGAGCCTGGTACTATGGACAGTATCAGATCTGGCCTTTATGGCCAGATCTTCAGGCCGGATAACTTTGTTTTCGGTCAGTCTGGGGCTGGAAACAACTGGGCCAAAGGGCATTACACTGAAGGTGCCGAGCTTATTGATTCCGTGCTCGATGTCGTTCGGAAGGAGGCGGAGAACTGTGATTGCTTGCAAGGGTTTCAGGTGTGCCATTCTCTAGGAGGTGGAACTGGATCTGGAATGGGAACTCTTCTGATTTCGAAGATCAGAGAAGAATACCCGGACAGGATGATGCTTACCTTCTCTGTCTTTCCATCTCCCAAGGTCTCTGATACTGTTGTTGAGCCTTACAATGCAACTCTCTCAGTTCATCAACTGGTTGAAAATGCGGATGAGTGCATGGTTCTTGACAATGAAGCTCTGTATGATATCTGCTTCCGTACCCTCAAGCTCACCACTCCTAGCTGTAAGATATTTATTCCTTTCAACGTCTGGAACTTTCTTCTTTACTTTGTACTCACTACTTGAGTAGTATGCTGTCTCGTTGTTTCATGGCACGTATTGATTTAAATACACCGAGTTAAAGCCGATCTGTGGGTAGTTGTAAATTATTGATGAGATCTGGTACATGAACTATGTTAGTCTATTTATCGGGGAAAAAAGAAGATCCATGTTAGTCTAGTGATTTGAAAGTGCATCTTAACTTCAAGGTGTTTTGAAAACAGGTTGGTATAATTCATTCATCCATACTAATATGGTTTTACGCTTGTGGTTGAAACAGTTGGCGATTTGAACCATTTGATCTCTGCAACAATGTCCGGAGTGACCTGTTGTTTGAGATTCCCTGGACAACTCAACTCTGATCTCAGAAAG

Coding sequence (CDS)

ATGAGAGAGATCCTTCACGTTCAGGGTGGGCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTCGTTTGCGCCGAGCACGGCATCGACACCACCGGAAAGTACGGGGGTGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCCAGTTGCGGGAGGTATGTGCCTCGCGCTGTTCTTATGGATCTTGAGCCTGGTACTATGGACAGTATCAGATCTGGCCTTTATGGCCAGATCTTCAGGCCGGATAACTTTGTTTTCGGTCAGTCTGGGGCTGGAAACAACTGGGCCAAAGGGCATTACACTGAAGGTGCCGAGCTTATTGATTCCGTGCTCGATGTCGTTCGGAAGGAGGCGGAGAACTGTGATTGCTTGCAAGGGTTTCAGGTGTGCCATTCTCTAGGAGGTGGAACTGGATCTGGAATGGGAACTCTTCTGATTTCGAAGATCAGAGAAGAATACCCGGACAGGATGATGCTTACCTTCTCTGTCTTTCCATCTCCCAAGGTCTCTGATACTGTTGTTGAGCCTTACAATGCAACTCTCTCAGTTCATCAACTGGTTGAAAATGCGGATGAGTGCATGGTTCTTGACAATGAAGCTCTGTATGATATCTGCTTCCGTACCCTCAAGCTCACCACTCCTAGCTGTAAGATATTTATTCCTTTCAACGTCTGGAACTTTCTTCTTTACTTTGTACTCACTACTTGA

Protein sequence

MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCKIFIPFNVWNFLLYFVLTT

Homology

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BLAST of Lcy04g009280.1 vs. ExPASy Swiss-Prot
Match: P37392 (Tubulin beta-1 chain OS=Lupinus albus OX=3870 GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 3.3e-127
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YGGD++LQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDNELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. ExPASy Swiss-Prot
Match: Q6VAF4 (Tubulin beta-9 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 5.6e-127
Identity = 213/221 (96.38%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YGGDS+LQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDSELQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR MLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRTMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. ExPASy Swiss-Prot
Match: P29501 (Tubulin beta-2 chain (Fragment) OS=Pisum sativum OX=3888 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.1e-126
Identity = 212/219 (96.80%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 3   EILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYVPR 62
           EI+H+QGGQCGNQIGAKFWEVVCAEHGID TG+YGGD+DLQLERINVYYNEASCGRYVPR
Sbjct: 1   EIVHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRYVPR 60

Query: 63  AVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
           AVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK
Sbjct: 61  AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 120

Query: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
           EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP
Sbjct: 121 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 180

Query: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 219

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BLAST of Lcy04g009280.1 vs. ExPASy Swiss-Prot
Match: Q56YW9 (Tubulin beta-2 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB2 PE=2 SV=2)

HSP 1 Score: 452.6 bits (1163), Expect = 2.8e-126
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

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BLAST of Lcy04g009280.1 vs. ExPASy Swiss-Prot
Match: Q9ASR0 (Tubulin beta-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 452.6 bits (1163), Expect = 2.8e-126
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

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BLAST of Lcy04g009280.1 vs. ExPASy TrEMBL
Match: A0A5Q0LQ39 (Tubulin beta chain OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 6.9e-128
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. ExPASy TrEMBL
Match: A0A6J1HSH7 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111466207 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDS+LQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSELQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. ExPASy TrEMBL
Match: A0A6J1F050 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111438199 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDS+LQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSELQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. ExPASy TrEMBL
Match: A0A411FW73 (Tubulin beta chain OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDS+LQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSELQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. ExPASy TrEMBL
Match: A0A6J1IPB5 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111478235 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.8e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKY GDSDLQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. NCBI nr
Match: QFZ79246.1 (tubulin beta-1 chain [Luffa aegyptiaca])

HSP 1 Score: 466.5 bits (1199), Expect = 1.4e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. NCBI nr
Match: XP_022966563.1 (tubulin beta-1 chain [Cucurbita maxima])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDS+LQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSELQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. NCBI nr
Match: QBA97746.1 (tubulin beta chain [Cucurbita pepo])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDS+LQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSELQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. NCBI nr
Match: XP_022931923.1 (tubulin beta-1 chain [Cucurbita moschata] >XP_023518313.1 tubulin beta-1 chain [Cucurbita pepo subsp. pepo] >KAG6595372.1 Tubulin beta-1 chain, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDS+LQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSELQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. NCBI nr
Match: XP_022950702.1 (tubulin beta chain-like [Cucurbita moschata] >XP_022978170.1 tubulin beta chain-like [Cucurbita maxima] >XP_023543287.1 tubulin beta chain-like [Cucurbita pepo subsp. pepo] >KAG6603607.1 Tubulin beta-8 chain, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKY GDSDLQLERINVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-127
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-127
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-127
Identity = 211/221 (95.48%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+Y G++DLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-127
Identity = 211/221 (95.48%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+Y G++DLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of Lcy04g009280.1 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 447.6 bits (1150), Expect = 6.4e-126
Identity = 208/221 (94.12%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYGGDSDLQLERINVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEVVC EHGID TG+Y G+SDLQLER+NVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRA+LMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

The following BLAST results are available for this feature:

BLAST of Lcy04g009280.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37392	3.3e-127	95.93	Tubulin beta-1 chain OS=Lupinus albus OX=3870 GN=TUBB1 PE=3 SV=1	[more]
Q6VAF4	5.6e-127	96.38	Tubulin beta-9 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
P29501	2.1e-126	96.80	Tubulin beta-2 chain (Fragment) OS=Pisum sativum OX=3888 GN=TUBB2 PE=2 SV=1	[more]
Q56YW9	2.8e-126	96.38	Tubulin beta-2 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB2 PE=2 SV=2	[more]
Q9ASR0	2.8e-126	96.38	Tubulin beta-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB3 PE=2 SV=2	[more]

BLAST of Lcy04g009280.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5Q0LQ39	6.9e-128	100.00	Tubulin beta chain OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1HSH7	2.0e-127	99.55	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111466207 PE=3 SV=1	[more]
A0A6J1F050	2.0e-127	99.55	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111438199 PE=3 SV=1	[more]
A0A411FW73	2.0e-127	99.55	Tubulin beta chain OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1IPB5	5.8e-127	99.55	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111478235 PE=3 SV=1	[more]

BLAST of Lcy04g009280.1 vs. NCBI nr


Match Name	E-value	Identity	Description
QFZ79246.1	1.4e-127	100.00	tubulin beta-1 chain [Luffa aegyptiaca]	[more]
XP_022966563.1	4.2e-127	99.55	tubulin beta-1 chain [Cucurbita maxima]	[more]
QBA97746.1	4.2e-127	99.55	tubulin beta chain [Cucurbita pepo]	[more]
XP_022931923.1	4.2e-127	99.55	tubulin beta-1 chain [Cucurbita moschata] >XP_023518313.1 tubulin beta-1 chain [...	[more]
XP_022950702.1	1.2e-126	99.55	tubulin beta chain-like [Cucurbita moschata] >XP_022978170.1 tubulin beta chain-...	[more]

BLAST of Lcy04g009280.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62690.1	2.0e-127	96.38	tubulin beta chain 2	[more]
AT5G62700.1	2.0e-127	96.38	tubulin beta chain 3	[more]
AT5G23860.1	2.0e-127	95.48	tubulin beta 8	[more]
AT5G23860.2	2.0e-127	95.48	tubulin beta 8	[more]
AT5G12250.1	6.4e-126	94.12	beta-6 tubulin	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 108..126 score: 87.58 coord: 152..164 score: 91.43 coord: 212..224 score: 63.52 coord: 88..99 score: 94.76 coord: 41..58 score: 78.7
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 176..189 score: 79.11 coord: 10..30 score: 71.41 coord: 132..150 score: 79.04 coord: 190..210 score: 67.82 coord: 51..70 score: 66.6 coord: 93..104 score: 76.26 coord: 106..130 score: 70.19 coord: 151..172 score: 59.63
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..222
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..228 e-value: 1.2E-50 score: 184.2
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 2.3E-70 score: 236.8
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..233 e-value: 4.8E-110 score: 369.2
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..222
None	No IPR available	PANTHER	PTHR11588:SF351	TUBULIN BETA-2 CHAIN	coord: 1..222
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..221 e-value: 1.47932E-152 score: 429.294
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy04g009280	Lcy04g009280	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g009280.1.utr5p1	Lcy04g009280.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g009280.1.exon1	Lcy04g009280.1.exon1	exon
Lcy04g009280.1.exon2	Lcy04g009280.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g009280.1.cds1	Lcy04g009280.1.cds1	CDS
Lcy04g009280.1.cds2	Lcy04g009280.1.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g009280.1.utr3p1	Lcy04g009280.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy04g009280.1	Lcy04g009280.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton