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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA mRNA sequence ATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA Coding sequence (CDS) ATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA Protein sequence MDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAILEWIKKLTEKIKDYPDLIVPPLLVEPDAAGECKTTWKSRWRSMKLKAWRVWQM
Homology
BLAST of Lcy02g006410.1 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query: 2 DAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAILEWIKKLTEKIKDY 61
DA+W DS++ GG+GWIIR G ++ GN +KL+EA AILE ++ LT
Sbjct: 84 DASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRNLTNL---- 143
Query: 62 PDLIVPPLLVEPDAA 77
++ PL +E D+A
Sbjct: 144 --GVLRPLHIETDSA 152
BLAST of Lcy02g006410.1 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 55.1 bits (131), Expect = 4.1e-04 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query: 2 DAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAILEWIKKLTEKIKDY 61
DA+W DS++ GG+GWIIR G ++ GN +KL+EA AILE ++ LT
Sbjct: 84 DASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRNLTNL---- 143
Query: 62 PDLIVPPLLVEPDAA 77
++ PL +E D+A
Sbjct: 144 --GVLRPLHIETDSA 152
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DNV9 | 2.0e-04 | 40.00 | uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022155262.1 | 4.1e-04 | 40.00 | uncharacterized protein LOC111022403 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lcy02g006410.1.exon1 | Lcy02g006410.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lcy02g006410.1.cds1 | Lcy02g006410.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lcy02g006410.1 | Lcy02g006410.1-protein | polypeptide |
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