Lag0036560.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036560.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	PsbP domain-containing protein
Location	chr3: 48501074 .. 48506532 (+)
Sequence length	1512
RNA-Seq Expression	Lag0036560.1
Synteny	Lag0036560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTCCTCCTCGATTCGTTCTTACCTCGAATTCACACACTGAGTTCTTCAATTCGCCAAAGGATTCCAAGCACTTCCCCTTCTCCGCGGTGGCCCGTCGATTCATTCCCAAAATGCCGCTCCTCACTCTGCTCTGAATCTCAATCGGTAATTCTTCCAAAAACAAACTACGCTATCTAATCCAACCAACTCTACTCTGTAATCTGCAACTTGTTACTTGCATTTATCGCTCTAGCTTTCTAATATGCAATCAGATTAAAGCCCTTGCAGTTCCGAGGAGGAATGCAATGGCGTTGATCTTGTCTACTTGTATTTTCTCCAATTCTGCATTGGCTGACCCATCTGTTGGATTATTGGAATACATTGACACTTTTGATGGCTATTCGTTCAAGTACCCTAAGAATTGGATTCAAGTTCGAGGGGCCGGGGCTGATATATTCTTCAGGGATCCGTTTGTTCTTGATGAGAATGTTTCTGTGGAGTTCTCGTCGCCGTCTTCGTCGAGCTATAAGAGCGTTGAGGACTTGGGACCTCCTGAAGAAGCGGGGAAGAAAGTGCTGAAGCAGTATTTGACGGAGTTTATGTCTACGCGGCTTGGGGTTAGAAGGGAATCAAACATTCTTTCTACTTCTTCCAGAATGGCAGATGATGGGAGGATATACTACCAAGTTGAGGTAATGTCAATATTCAAAAGTTTGTTTGATTTGTAGTCAATTTTGGTCCGTTTTGGTGAAGGACTTGTTCTTTGTGTGCTGATTTCTCGGGAATGATATTTTGAAAATCTTTTCTCAAGTTTTCAAAATAAAAGTTGCCTTTGGTTGAGTGTAATAGCTCTTCCCTCAATAACTTGAAGACAACGTTTTTTAGTGTTTTTAACTACAAAAATCATTTGTCAGCCTGAGCCTAACTGACCTTAGATTAGAGGTTAGTCCTCTCACTAGAGAACTCAAAAACAAATCAAATCATTGTTCATGAAACTTAATGGTAAATAACAGAAAGCCATAAATGGTGCAAGAGCAACATCCCAAAGATTGTTGAGTTGTGACATTCTAGCTTGGTTAGAATCCATTTCCAATTATATGGTTTGGTTCTTGTGAGTTGTGTTGTGACATTCTAGTTGTCAAACTTTTCTTTATATGTATGCATGTAAAGTGTATCCCAAAGATATGTATACACATATCTTTCTACCTTTAGAAATGTGAAAGTTAAGCCTTCAACATTAAAAAATGTGATGTCACTAAATTAGTCAGTCTACTGACTTTTTCTGATTCTGATTATATATATTAAGGAATATCCTCAAATTTGGGTCTTTTCGTTTTCGTTTTCCTTTTTTTCCTCTGACGTTGATAGGGTCAGTAAAAATGGATCTGTAAATTACTGGTCATCTACTTGACTCACAATTTTGAAAAAAAAAATCTGGGAATGCAAAAAGTGATGATTGGGAGTGTAGGTCGACTATATTTGAACTATACAAGTAGAAACTTGGACTCTATGCTTAGGTTATAGATTTATAGAAGTTAGTTACTAGTATGGGTGCAAATGTCGTTTTTGTTGCCAAAGCGAATATAACTTGGTAATTGACATATACCCTCGACCATGAGGTCAGAGGTTCGAATCCCCCCACCCCAAATGTTGATGTACTCAAAAAAAAAAATATCGTTTTTGTTAGTTTGGGTTTGGACTATGAGACTAGTAATCTTGTTGGGTAGATGAACAAACTCATGCAGAATATAAATTTGGCTTTTTTTTTTAATGTTTTTTAGTTCAAACAGGAACAGAAGATTTAAACTTATACCTCTTGGTTAAGGACACATGCATTATGTCAACTGAGTTATGCTTACTTTGACGTATAAATTTGGCTTCTTAACTTCATGGATTTAGTTATACAATTTGTATCATGACCCACATTTAACTCTAGACTGTTCTCACCAGACCATAGCTCAACTGACATAAAGTTGTATTGATAACCACGAGATATGTGGTTCGAATCCCCCCACCCCACATATTGTCAAAAAAAAAAAAACTCTAGACTATTCTTGCCAAAATGAGTTTAGCTCAGTGGTAATTGGCATGTACCTTTGACTAAGAGGTTAGAGGTTCGAATCCCCTCTAAAAAAAATTAAAAAAACTAGACTGTTCTCTTTCTTTTTTTTTTTTTTAATTTTTCTTCTTTTGAAATGGAAAATAGGTAGATTGTTACTAAGAGAGATGGAAAATAGTAGATTATTGTGTTACAGGAGCCAAAGTTTAAAGAGGGGAGAAATGATGTTTAAACCCAAATTATTATTATTATTTTAAATCTCTGTTTCTTCAAATCATAAGTAACAATATCTACTCTTTCAATTACGTTGATAGCAGGTAAACATAAAGTCATATGCAAACAACAACGAATTGGCAGTAATGCCGGAGGATCGGGTGGTTCGTCTGGAATGGGATCGGAGATATCTCTCAGTTCTTGGAGTCGAAAACAGTCGGCTATACGAGTTAAGATTACAAACACCAGAAAATGTATTTGTAGAAGAAGAAAATGAATTGCGTCAGGTTATGGATTCTTTCAGAGTCAACAAAGTGAATGCATGAAATGAAACACAAACGGATAGTGGCAGCCGAGGCTTTTTATCCAGACGTAATCGCTGAAATACTGTACTTCCCCATCATCAAAGCAAATTGCTACTGAGTTTTACAGTTTGATATTGGAAGTCCTGTTTCACTAATTTAACATTTCTTCATTCCTTGATAAGAAAAGGGAACCAAAGATTGACGGTGTCAATTTCACTAAAACAGGAATCACTTCTGAGCTGCCAAAAGGCATCATAACTTTACAAATGGGGAGACTTTTTAGGTATGTTTTCCCCCATCATAAGATCGTGCTTTGGTTCACAGGTTTTAACAGAAGATCGCTCAAGATCATCACAAATTCACAAGTGATAATTAACGTGATAGTTTATGAGACCAAACTTCGAACTTCCTTGCTTGTGTGAGAGCTTGAACGCCTTTGTAATGATTATTTGGCAAGTTCTGGAGGCCAGAGAGGACTATTCCCATGATCTTAAAACGCACTTGAAATGTTGGAAATACATGAAGCTGTTGCAATCCCGTCTCAAGGGTTAATGTTCCAGACATTGAATTTATCTTTTGGCATCTTTCCAATTGTCCAAGAGCAGATCTGTAGGAACAAATTCACAAGAAATTTAAGACTTCCATTTATTTTAATCTTTTCAGAAATAGAACTTTATTGAAAGTTAGTATATTATAAGAGAATAAGGATAGAATATAGTATCCTTAAGCAAGCAAGCAAACAAACAATTCAGGAACCAAGGCCCTTCACTAATTGAACCCTTCTTTTCCTTCACTAATCACTAACATAGAAAATGAACTGACAATTACTTATATGTTGAGCGAAATGAAATCGTCAATTAAAAATGAAAGATGATTAAAAAGATGCAAAAGTGTCTGAAATATATGAACGAAACTTTCTTGATTCATTATTCTCACTGGCAATTTATAATCCACACATGTTTGAGTCAGGGAGAACTGATGCAGCCAAGCATCAAAGGAGAAAATCTCCAAGAACTCTCATAAGAGTATTTCATTATGATTCAAGAAGTCAATACAAAAGATTTAACCTCTATTTATGGAGGACTAATGAGTCTAGCTATGACATACTAACTAAGCCAACAGTTAATTAACTACCAACTAAAAAAACTACAATAGAGCATGACTCAACTGAAAAATGTACTCACCTTCCTAAAGTTCAAAGAGTTGAATCTCTCCACTCCATATTAAAGTCCAAAAAGAAAGAAAAAGAAAATCTTCTACAAACTAAAATCATTAACAGCTCATATTATAAATTATAAAACTACACCAAGTACGCTACATCAAGAGAGAATAACTTTAACCATCTGTTTTCCCTGTGAAAATTTATGGAACTAGAGTAGTAGGTGCTCCCTTAAATCAAAAACAGCAAGTGTATATGTGAATAGATATGTATATACCTCATATACAATGATAAAATTATGCTTGACCAAATTTTCATTCAACTCTCCAAGATAATCTATGAGAACCTCTGACCTCCTGATCGATGGTACATGCCAATTACTGCCGAGTCATGCTCACTTTAGCCACTCTGCAAAGAAACTAAGGATCAAAAGTTAAGAACCTCAAATAGTCAATCTAATTTCTTTCTCATTCTAGGTAAGAACTTTATACTTAATGGTCTTCTTGGACAACAAGAAGAGTATTTGATCTTTATATTTAAATTCCCAGTTGTTTAAAAATATTTTTCCCAGGCGCTTGGTGTAGAAAATTGTTTGGAGTATATTATTGAATAAAAAAGGCTCTCATGACTCCTCTCTCTCCCCGCCCCCTCCCCTCTCCCATCCTCCCCTCCTTCGCCGGAAAACCCCTCTCTCTGCCATGACGCCTCCCTCCCCCGCCCAAAAGCACTCGCCCAAGTCACCCACCCATGAAGACCATACAATCGTCATCCATATCCTTCAGGATTGAGCGAAAATCCTTCGCCATAGCAGCTGATCCCAGGAACAACAGACTCTATCGCCTTACTAAAGCCACCCGCAACAGAAGCTTCTCATTGACGCTTTCCAAATAGGCTTTATCTTGGTTAAAATCTAGTTTCTCCAGGCTATGTGACCTTCCTTTGATCCAGAAGTTCTTTTCCGAAAAAAGAGTTGGCAAAGTGGATTTGGAGGTTTCATATTGAAAATAAGGCTATTTGGAGGAAGATTATTGTCGCTAAATATGGGCTTGCCACAAACAATCTCAAACCAGGAAAATCATCTTTGAACTCATCAAAAGGTCCTTGGAAAGCTATTCAGAATCTGCAAAATCTGATTTACAGCAATATGGCTATTAAAGTGGGAAATGGAAACAGCACATTGTTTTGGGAGGAGGCTTGGCTTGGCAACACAAGCTTTCGGGTGACTTATCCCCACCTTTATCATCTATCCCTCAAAAAAGAAGCCCATATTGCCGAATTATGGGACCCCTCATCGAGAGCTTGGAACTTACAGCTTAGAAGAAATCTGACAGATAATGAATTATCAAAATGGGCATCCTTGTCTCACCATCTATCCACCTTCACCATTAAAGAGGATGATGATATATGGGTTTGGTCCCGTGACAGAACAGGAATCGTCTCCTCGGGAACTCTCACTAAAAAGCTTGCCTCTAGTGAAAATACAGCCAATGTGGATTGTACAAGTTGCTTTGGAAAGGTCCTATGCCCAAGAAGGTCAAGTTTTTTATGTGGGAGCTTAGCCACGCTTGTATAAACATCGTCGATGTTGTCCAGCGCAAGATGCCATCGATGGCCTTTTCCCCAAGCTGTTGCTGCCTTTGTTATACAGCTCAAGAATCGCAAATTCACCTCTTCAGCTTGTGTTCATATGTGTCGGTCTTCTGGGACACTATACAGCAAGCCTTTGGATGGCAAATGA

mRNA sequence

ATGGCCGTCCTCCTCGATTCGTTCTTACCTCGAATTCACACACTGAGTTCTTCAATTCGCCAAAGGATTCCAAGCACTTCCCCTTCTCCGCGGTGGCCCGTCGATTCATTCCCAAAATGCCGCTCCTCACTCTGCTCTGAATCTCAATCGATTAAAGCCCTTGCAGTTCCGAGGAGGAATGCAATGGCGTTGATCTTGTCTACTTGTATTTTCTCCAATTCTGCATTGGCTGACCCATCTGTTGGATTATTGGAATACATTGACACTTTTGATGGCTATTCGTTCAAGTACCCTAAGAATTGGATTCAAGTTCGAGGGGCCGGGGCTGATATATTCTTCAGGGATCCGTTTGTTCTTGATGAGAATGTTTCTGTGGAGTTCTCGTCGCCGTCTTCGTCGAGCTATAAGAGCGTTGAGGACTTGGGACCTCCTGAAGAAGCGGGGAAGAAAGTGCTGAAGCAGTATTTGACGGAGTTTATGTCTACGCGGCTTGGGGTTAGAAGGGAATCAAACATTCTTTCTACTTCTTCCAGAATGGCAGATGATGGGAGGATATACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAACGAATTGGCAGTAATGCCGGAGGATCGGGTGGTTCGTCTGGAATGGGATCGGAGATATCTCTCAGTTCTTGGAGTCGAAAACAGTCGGCTATACGAGTTAAGATTACAAACACCAGAAAATGTATTTGTAGAAGAAGAAAATGAATTGCGTCAGAAAAGGGAACCAAAGATTGACGGTGTCAATTTCACTAAAACAGGAATCACTTCTGAGCTGCCAAAAGGCATCATAACTTTACAAATGGGGAGACTTTTTAGAAGTTCTTTTCCGAAAAAAGAGTTGGCAAAGTGGATTTGGAGGTTTCATATTGAAAATAAGGCTATTTGGAGGAAGATTATTGTCGCTAAATATGGGCTTGCCACAAACAATCTCAAACCAGGAAAATCATCTTTGAACTCATCAAAAGGTCCTTGGAAAGCTATTCAGAATCTGCAAAATCTGATTTACAGCAATATGGCTATTAAAGTGGGAAATGGAAACAGCACATTGTTTTGGGAGGAGGCTTGGCTTGGCAACACAAGCTTTCGGGTGACTTATCCCCACCTTTATCATCTATCCCTCAAAAAAGAAGCCCATATTGCCGAATTATGGGACCCCTCATCGAGAGCTTGGAACTTACAGCTTAGAAGAAATCTGACAGATAATGAATTATCAAAATGGGCATCCTTGTCTCACCATCTATCCACCTTCACCATTAAAGAGGATGATGATATATGGGTTTGGTCCCGTGACAGAACAGGAATCGTCTCCTCGGGAACTCTCACTAAAAAGCTTGCCTCTAGTGAAAATACAGCCAATGTGGATTGTACAAGTTGCTTTGGAAAGCTCAAGAATCGCAAATTCACCTCTTCAGCTTGTGTTCATATGTGTCGGTCTTCTGGGACACTATACAGCAAGCCTTTGGATGGCAAATGA

Coding sequence (CDS)

ATGGCCGTCCTCCTCGATTCGTTCTTACCTCGAATTCACACACTGAGTTCTTCAATTCGCCAAAGGATTCCAAGCACTTCCCCTTCTCCGCGGTGGCCCGTCGATTCATTCCCAAAATGCCGCTCCTCACTCTGCTCTGAATCTCAATCGATTAAAGCCCTTGCAGTTCCGAGGAGGAATGCAATGGCGTTGATCTTGTCTACTTGTATTTTCTCCAATTCTGCATTGGCTGACCCATCTGTTGGATTATTGGAATACATTGACACTTTTGATGGCTATTCGTTCAAGTACCCTAAGAATTGGATTCAAGTTCGAGGGGCCGGGGCTGATATATTCTTCAGGGATCCGTTTGTTCTTGATGAGAATGTTTCTGTGGAGTTCTCGTCGCCGTCTTCGTCGAGCTATAAGAGCGTTGAGGACTTGGGACCTCCTGAAGAAGCGGGGAAGAAAGTGCTGAAGCAGTATTTGACGGAGTTTATGTCTACGCGGCTTGGGGTTAGAAGGGAATCAAACATTCTTTCTACTTCTTCCAGAATGGCAGATGATGGGAGGATATACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAACGAATTGGCAGTAATGCCGGAGGATCGGGTGGTTCGTCTGGAATGGGATCGGAGATATCTCTCAGTTCTTGGAGTCGAAAACAGTCGGCTATACGAGTTAAGATTACAAACACCAGAAAATGTATTTGTAGAAGAAGAAAATGAATTGCGTCAGAAAAGGGAACCAAAGATTGACGGTGTCAATTTCACTAAAACAGGAATCACTTCTGAGCTGCCAAAAGGCATCATAACTTTACAAATGGGGAGACTTTTTAGAAGTTCTTTTCCGAAAAAAGAGTTGGCAAAGTGGATTTGGAGGTTTCATATTGAAAATAAGGCTATTTGGAGGAAGATTATTGTCGCTAAATATGGGCTTGCCACAAACAATCTCAAACCAGGAAAATCATCTTTGAACTCATCAAAAGGTCCTTGGAAAGCTATTCAGAATCTGCAAAATCTGATTTACAGCAATATGGCTATTAAAGTGGGAAATGGAAACAGCACATTGTTTTGGGAGGAGGCTTGGCTTGGCAACACAAGCTTTCGGGTGACTTATCCCCACCTTTATCATCTATCCCTCAAAAAAGAAGCCCATATTGCCGAATTATGGGACCCCTCATCGAGAGCTTGGAACTTACAGCTTAGAAGAAATCTGACAGATAATGAATTATCAAAATGGGCATCCTTGTCTCACCATCTATCCACCTTCACCATTAAAGAGGATGATGATATATGGGTTTGGTCCCGTGACAGAACAGGAATCGTCTCCTCGGGAACTCTCACTAAAAAGCTTGCCTCTAGTGAAAATACAGCCAATGTGGATTGTACAAGTTGCTTTGGAAAGCTCAAGAATCGCAAATTCACCTCTTCAGCTTGTGTTCATATGTGTCGGTCTTCTGGGACACTATACAGCAAGCCTTTGGATGGCAAATGA

Protein sequence

MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRWPVDSFPKCRSSLCSESQSIKALAVPRRNAMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQKREPKIDGVNFTKTGITSELPKGIITLQMGRLFRSSFPKKELAKWIWRFHIENKAIWRKIIVAKYGLATNNLKPGKSSLNSSKGPWKAIQNLQNLIYSNMAIKVGNGNSTLFWEEAWLGNTSFRVTYPHLYHLSLKKEAHIAELWDPSSRAWNLQLRRNLTDNELSKWASLSHHLSTFTIKEDDDIWVWSRDRTGIVSSGTLTKKLASSENTANVDCTSCFGKLKNRKFTSSACVHMCRSSGTLYSKPLDGK

Homology

[Close]

BLAST of Lag0036560.1 vs. NCBI nr
Match: XP_022961486.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024032.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 442.2 bits (1136), Expect = 6.0e-120
Identity = 228/252 (90.48%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRW-PVDSFPKCRSSLCSESQSIKALAVPRR 60
           MAV+LDSFLP IHTLSSS R+ IP+ S SPRW P+DS PKCR SL SESQ IKALAVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASSSPRWPPIDSSPKCRFSLSSESQPIKALAVPRR 60

Query: 61  NAMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           +AMALILS+CIFSNSALA+ SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSS YKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENELRQ 252
           NVFVEEENELRQ
Sbjct: 241 NVFVEEENELRQ 252

[Close]

BLAST of Lag0036560.1 vs. NCBI nr
Match: XP_022968780.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 439.1 bits (1128), Expect = 5.1e-119
Identity = 226/252 (89.68%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRW-PVDSFPKCRSSLCSESQSIKALAVPRR 60
           MAV+LDSFLP IHTLSSS R+ IP+ SPSPRW P+DS PK R SL SES+ IKALAVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASPSPRWPPIDSSPKSRFSLTSESKPIKALAVPRR 60

Query: 61  NAMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           +AMALILS+CIFSNSA+A+ SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSAMAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSS YKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENELRQ 252
           NVFVEEENELRQ
Sbjct: 241 NVFVEEENELRQ 252

[Close]

BLAST of Lag0036560.1 vs. NCBI nr
Match: XP_004139523.1 (psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KAE8652838.1 hypothetical protein Csa_022829 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 4.3e-118
Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRWPVDSFPKCRSSLCSESQSIKALAVPRRN 60
           MAV+LDSFLP I TLSSS RQRIPSTS S RWP++SFPKC    CSESQSIK +AVPRR+
Sbjct: 1   MAVILDSFLPSIQTLSSSFRQRIPSTS-STRWPMNSFPKC----CSESQSIKGVAVPRRS 60

Query: 61  AMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120
           AMAL+LSTCIFSNSALA  SVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD
Sbjct: 61  AMALMLSTCIFSNSALAVSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120

Query: 121 ENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180
           EN+SVEFSSPSSS Y SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA
Sbjct: 121 ENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180

Query: 181 DDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240
           DDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN
Sbjct: 181 DDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240

Query: 241 VFVEEENELRQ 252
           VFVEEEN+LRQ
Sbjct: 241 VFVEEENDLRQ 246

[Close]

BLAST of Lag0036560.1 vs. NCBI nr
Match: XP_023515691.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 5.6e-118
Identity = 225/252 (89.29%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRW-PVDSFPKCRSSLCSESQSIKALAVPRR 60
           MAV+LDSFLP IHTL+SS R+ IP+ S SPRW P+DS PK R SL SESQ IK LAVPRR
Sbjct: 1   MAVILDSFLPPIHTLTSSSRKWIPTASSSPRWPPIDSSPKSRFSLSSESQPIKGLAVPRR 60

Query: 61  NAMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           +AMALILS+CIFSNSALA+ SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSS YKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENELRQ 252
           NVFVEEENELRQ
Sbjct: 241 NVFVEEENELRQ 252

[Close]

BLAST of Lag0036560.1 vs. NCBI nr
Match: XP_008464319.1 (PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo] >KAA0035717.1 psbP domain-containing protein 1 [Cucumis melo var. makuwa] >TYK30829.1 psbP domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 429.5 bits (1103), Expect = 4.0e-116
Identity = 225/251 (89.64%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRWPVDSFPKCRSSLCSESQSIKALAVPRRN 60
           MAV+L SFLP I TL+S IRQRIPSTS S R P+ SFPKC    CS+SQSIK +AVPRRN
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS-STRSPIISFPKC----CSQSQSIKDVAVPRRN 60

Query: 61  AMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120
           AMALILSTCIFSNSA A PSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD
Sbjct: 61  AMALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120

Query: 121 ENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180
           EN+SVEFSSPSSS Y SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA
Sbjct: 121 ENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180

Query: 181 DDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240
           DDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN
Sbjct: 181 DDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240

Query: 241 VFVEEENELRQ 252
           VFVEEENELRQ
Sbjct: 241 VFVEEENELRQ 246

[Close]

BLAST of Lag0036560.1 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.2e-78
Identity = 158/235 (67.23%), Postives = 188/235 (80.00%), Query Frame = 0


Query: 33  PVDSFPKCRSSLCSESQSIKAL----------AVPRRNA--MALILSTCIFSN----SAL 92
           P+ S PK +S+  ++ +S  A+          AV RR +  M L++S  I S     +A 
Sbjct: 44  PISSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAF 103

Query: 93  ADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENVSVEFSSPSSSSYK 152
           A   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP VLDEN+SVEFSSPSSS+Y 
Sbjct: 104 ASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYT 163

Query: 153 SVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRIYYQVEVNIKSY 212
           S+EDLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSSR+ADDG++YYQVEVNIKSY
Sbjct: 164 SLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSY 223

Query: 213 ANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQ 252
           ANNNELAVMP+DRV RLEW+RRYL+VLGVEN RLY +RLQTPE VF+EEE +LR+
Sbjct: 224 ANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRR 277

[Close]

BLAST of Lag0036560.1 vs. ExPASy TrEMBL
Match: A0A6J1HAH2 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462051 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.9e-120
Identity = 228/252 (90.48%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRW-PVDSFPKCRSSLCSESQSIKALAVPRR 60
           MAV+LDSFLP IHTLSSS R+ IP+ S SPRW P+DS PKCR SL SESQ IKALAVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASSSPRWPPIDSSPKCRFSLSSESQPIKALAVPRR 60

Query: 61  NAMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           +AMALILS+CIFSNSALA+ SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSS YKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENELRQ 252
           NVFVEEENELRQ
Sbjct: 241 NVFVEEENELRQ 252

[Close]

BLAST of Lag0036560.1 vs. ExPASy TrEMBL
Match: A0A6J1HY63 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467914 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 2.5e-119
Identity = 226/252 (89.68%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRW-PVDSFPKCRSSLCSESQSIKALAVPRR 60
           MAV+LDSFLP IHTLSSS R+ IP+ SPSPRW P+DS PK R SL SES+ IKALAVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASPSPRWPPIDSSPKSRFSLTSESKPIKALAVPRR 60

Query: 61  NAMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           +AMALILS+CIFSNSA+A+ SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSAMAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSS YKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENELRQ 252
           NVFVEEENELRQ
Sbjct: 241 NVFVEEENELRQ 252

[Close]

BLAST of Lag0036560.1 vs. ExPASy TrEMBL
Match: A0A5D3E4R5 (PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00220 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116
Identity = 225/251 (89.64%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRWPVDSFPKCRSSLCSESQSIKALAVPRRN 60
           MAV+L SFLP I TL+S IRQRIPSTS S R P+ SFPKC    CS+SQSIK +AVPRRN
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS-STRSPIISFPKC----CSQSQSIKDVAVPRRN 60

Query: 61  AMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120
           AMALILSTCIFSNSA A PSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD
Sbjct: 61  AMALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120

Query: 121 ENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180
           EN+SVEFSSPSSS Y SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA
Sbjct: 121 ENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180

Query: 181 DDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240
           DDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN
Sbjct: 181 DDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240

Query: 241 VFVEEENELRQ 252
           VFVEEENELRQ
Sbjct: 241 VFVEEENELRQ 246

[Close]

BLAST of Lag0036560.1 vs. ExPASy TrEMBL
Match: A0A1S3CLM8 (psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502232 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116
Identity = 225/251 (89.64%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPSTSPSPRWPVDSFPKCRSSLCSESQSIKALAVPRRN 60
           MAV+L SFLP I TL+S IRQRIPSTS S R P+ SFPKC    CS+SQSIK +AVPRRN
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS-STRSPIISFPKC----CSQSQSIKDVAVPRRN 60

Query: 61  AMALILSTCIFSNSALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120
           AMALILSTCIFSNSA A PSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD
Sbjct: 61  AMALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLD 120

Query: 121 ENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180
           EN+SVEFSSPSSS Y SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA
Sbjct: 121 ENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMA 180

Query: 181 DDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240
           DDGR YYQVEVNIKSYANNNELAVMP+DRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN
Sbjct: 181 DDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPEN 240

Query: 241 VFVEEENELRQ 252
           VFVEEENELRQ
Sbjct: 241 VFVEEENELRQ 246

[Close]

BLAST of Lag0036560.1 vs. ExPASy TrEMBL
Match: A0A6J1DTH5 (psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023855 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116
Identity = 227/260 (87.31%), Postives = 241/260 (92.69%), Query Frame = 0


Query: 1   MAVLLDSFLPRIHTLSSSIRQRIPST--SPSPRWPVDSFPKCRSSLCSESQS--IKALAV 60
           MAV+LDS  P IH+LSSSIR+RIP+T  SPSPRWP DSFPK R+SL S+SQS  IKALAV
Sbjct: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60

Query: 61  PRRNAMALILSTCIFS----NSALAD-PSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           PRR+AMALILSTCIFS    N+ALAD PS GLLEYIDTFDGYSFKYPKNWIQVRGAGADI
Sbjct: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDP+VLDEN+SVEFSSPSSS YKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSRMADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLY 240
           +LSTSSR ADDG+ YYQVEVNIKSYAN+NELAVMP+DRVVRLEWDRRYLSVLGVENSRLY
Sbjct: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240

Query: 241 ELRLQTPENVFVEEENELRQ 252
           ELRLQTPENVFVEEENELRQ
Sbjct: 241 ELRLQTPENVFVEEENELRQ 260

[Close]

BLAST of Lag0036560.1 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 295.4 bits (755), Expect = 8.5e-80
Identity = 158/235 (67.23%), Postives = 188/235 (80.00%), Query Frame = 0


Query: 33  PVDSFPKCRSSLCSESQSIKAL----------AVPRRNA--MALILSTCIFSN----SAL 92
           P+ S PK +S+  ++ +S  A+          AV RR +  M L++S  I S     +A 
Sbjct: 44  PISSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAF 103

Query: 93  ADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENVSVEFSSPSSSSYK 152
           A   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP VLDEN+SVEFSSPSSS+Y 
Sbjct: 104 ASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYT 163

Query: 153 SVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRIYYQVEVNIKSY 212
           S+EDLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSSR+ADDG++YYQVEVNIKSY
Sbjct: 164 SLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSY 223

Query: 213 ANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQ 252
           ANNNELAVMP+DRV RLEW+RRYL+VLGVEN RLY +RLQTPE VF+EEE +LR+
Sbjct: 224 ANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRR 277

[Close]

BLAST of Lag0036560.1 vs. TAIR 10
Match: AT4G15510.3 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 290.8 bits (743), Expect = 2.1e-78
Identity = 147/194 (75.77%), Postives = 169/194 (87.11%), Query Frame = 0


Query: 62  MALILSTCIFSN----SALADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPF 121
           M L++S  I S     +A A   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP 
Sbjct: 3   MGLLMSGLIVSQANLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPV 62

Query: 122 VLDENVSVEFSSPSSSSYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSS 181
           VLDEN+SVEFSSPSSS+Y S+EDLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSS
Sbjct: 63  VLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSS 122

Query: 182 RMADDGRIYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQT 241
           R+ADDG++YYQVEVNIKSYANNNELAVMP+DRV RLEW+RRYL+VLGVEN RLY +RLQT
Sbjct: 123 RVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQT 182

Query: 242 PENVFVEEENELRQ 252
           PE VF+EEE +LR+
Sbjct: 183 PEKVFLEEEKDLRR 195

[Close]

BLAST of Lag0036560.1 vs. TAIR 10
Match: AT4G15510.2 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-50
Identity = 111/182 (60.99%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 33  PVDSFPKCRSSLCSESQSIKAL----------AVPRRNA--MALILSTCIFSN----SAL 92
           P+ S PK +S+  ++ +S  A+          AV RR +  M L++S  I S     +A 
Sbjct: 44  PISSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAF 103

Query: 93  ADPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENVSVEFSSPSSSSYK 152
           A   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP VLDEN+SVEFSSPSSS+Y 
Sbjct: 104 ASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYT 163

Query: 153 SVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRIYYQVEVNIKSY 199
           S+EDLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSSR+ADDG++YYQVEV+    
Sbjct: 164 SLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVSQSQV 223

[Close]

BLAST of Lag0036560.1 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 43.5 bits (101), Expect = 5.8e-04
Identity = 33/153 (21.57%), Postives = 64/153 (41.83%), Query Frame = 0


Query: 86  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENVSVEFSSPSSSSYKSVEDLGPPE 145
           ++D  DGYS+ YP +W +      D  F+D ++  +NV V F     +    + ++GP E
Sbjct: 91  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKN---DIHEVGPME 150

Query: 146 EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRIYYQVEVNIKS--YANNNELA 205
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 151 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFAT 210

Query: 206 VMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQ 237
           V   +       +R Y  ++G    R  +++ Q
Sbjct: 211 VAVGN-------NRYYTLIVGANERRWRKVKKQ 225

[Close]

BLAST of Lag0036560.1 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 43.5 bits (101), Expect = 5.8e-04
Identity = 33/153 (21.57%), Postives = 64/153 (41.83%), Query Frame = 0


Query: 86  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENVSVEFSSPSSSSYKSVEDLGPPE 145
           ++D  DGYS+ YP +W +      D  F+D ++  +NV V F     +    + ++GP E
Sbjct: 83  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKN---DIHEVGPME 142

Query: 146 EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRIYYQVEVNIKS--YANNNELA 205
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 143 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFAT 202

Query: 206 VMPEDRVVRLEWDRRYLSVLGVENSRLYELRLQ 237
           V   +       +R Y  ++G    R  +++ Q
Sbjct: 203 VAVGN-------NRYYTLIVGANERRWRKVKKQ 217

The following BLAST results are available for this feature:

BLAST of Lag0036560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961486.1	6.0e-120	90.48	psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498...	[more]
XP_022968780.1	5.1e-119	89.68	psbP domain-containing protein 1, chloroplastic [Cucurbita maxima]	[more]
XP_004139523.1	4.3e-118	90.04	psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KA...	[more]
XP_023515691.1	5.6e-118	89.29	psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_008464319.1	4.0e-116	89.64	PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis m...	[more]

BLAST of Lag0036560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23403	1.2e-78	67.23	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0036560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAH2	2.9e-120	90.48	psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HY63	2.5e-119	89.68	psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3E4R5	2.0e-116	89.64	PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CLM8	2.0e-116	89.64	psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1DTH5	3.3e-116	87.31	psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lag0036560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15510.1	8.5e-80	67.23	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.3	2.1e-78	75.77	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.2	1.1e-50	60.99	Photosystem II reaction center PsbP family protein	[more]
AT2G39470.1	5.8e-04	21.57	PsbP-like protein 2	[more]
AT2G39470.2	5.8e-04	21.57	PsbP-like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 83..251 e-value: 2.2E-43 score: 148.1
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 77..254 e-value: 5.6E-46 score: 158.7
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 43..251
None	No IPR available	PANTHER	PTHR31407:SF15	PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 43..251
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 86..244

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0036560	Lag0036560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0036560.1.exon1	Lag0036560.1.exon1	exon
Lag0036560.1.exon2	Lag0036560.1.exon2	exon
Lag0036560.1.exon3	Lag0036560.1.exon3	exon
Lag0036560.1.exon4	Lag0036560.1.exon4	exon
Lag0036560.1.exon5	Lag0036560.1.exon5	exon
Lag0036560.1.exon6	Lag0036560.1.exon6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0036560.1	cds.Lag0036560.1	CDS
cds.Lag0036560.1	cds.Lag0036560.1_2	CDS
cds.Lag0036560.1	cds.Lag0036560.1_3	CDS
cds.Lag0036560.1	cds.Lag0036560.1_4	CDS
cds.Lag0036560.1	cds.Lag0036560.1_5	CDS
cds.Lag0036560.1	cds.Lag0036560.1_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0036560.1	Lag0036560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009543	chloroplast thylakoid lumen
molecular_function	GO:0005509	calcium ion binding