Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTGGAAGCAGAGACAATTCTTGAAGGGCTCAAATCAATTATTGATACATGCAAGCAATCCCTCATTCCTCTTGTTGTAGAATCGGATGCGCTGGAAGTTGTTAGACTTCTGAACGGAGAAGCTGAGGACTTGTCGGACGTGAAGACTATCTTAGACGCCATCTCCGCCCTCGCCTCCAATGCTCTAGCCATCAATTTCGTTCACTATAGCAGATTTTTTAACACAGTAGCGTTGCCAAGGAGGCTTGTAGTCCTTATTTTTTTGTCGATCGAACGATGGATATTGATTTTGAGTGGAAAAGGGGCATGTATTTTGGACCCCTAA mRNA sequence ATGTTGGAAGCAGAGACAATTCTTGAAGGGCTCAAATCAATTATTGATACATGCAAGCAATCCCTCATTCCTCTTGTTGTAGAATCGGATGCGCTGGAAGTTGTTAGACTTCTGAACGGAGAAGCTGAGGACTTGTCGGACGTGAAGACTATCTTAGACGCCATCTCCGCCCTCGCCTCCAATGCTCTAGCCATCAATTTCGTTCACTATAGCAGATTTTTTAACACAGTAGCGTTGCCAAGGAGGCTTGTAGTCCTTATTTTTTTGTCGATCGAACGATGGATATTGATTTTGAGTGGAAAAGGGGCATGTATTTTGGACCCCTAA Coding sequence (CDS) ATGTTGGAAGCAGAGACAATTCTTGAAGGGCTCAAATCAATTATTGATACATGCAAGCAATCCCTCATTCCTCTTGTTGTAGAATCGGATGCGCTGGAAGTTGTTAGACTTCTGAACGGAGAAGCTGAGGACTTGTCGGACGTGAAGACTATCTTAGACGCCATCTCCGCCCTCGCCTCCAATGCTCTAGCCATCAATTTCGTTCACTATAGCAGATTTTTTAACACAGTAGCGTTGCCAAGGAGGCTTGTAGTCCTTATTTTTTTGTCGATCGAACGATGGATATTGATTTTGAGTGGAAAAGGGGCATGTATTTTGGACCCCTAA Protein sequence MLEAETILEGLKSIIDTCKQSLIPLVVESDALEVVRLLNGEAEDLSDVKTILDAISALASNALAINFVHYSRFFNTVALPRRLVVLIFLSIERWILILSGKGACILDP
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002156 | Ribonuclease H domain | PFAM | PF13456 | RVT_3 | coord: 3..78
e-value: 1.6E-7
score: 31.2 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Lag0029596 | Lag0029596 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lag0029596.1.exon1 | Lag0029596.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.Lag0029596.1 | cds.Lag0029596.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lag0029596.1 | Lag0029596.1-protein | polypeptide |
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0004523 |
RNA-DNA hybrid ribonuclease activity |
|
