Lag0029596 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029596
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr8: 40401457 .. 40401783 (-)
RNA-Seq ExpressionLag0029596
SyntenyLag0029596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAAGCAGAGACAATTCTTGAAGGGCTCAAATCAATTATTGATACATGCAAGCAATCCCTCATTCCTCTTGTTGTAGAATCGGATGCGCTGGAAGTTGTTAGACTTCTGAACGGAGAAGCTGAGGACTTGTCGGACGTGAAGACTATCTTAGACGCCATCTCCGCCCTCGCCTCCAATGCTCTAGCCATCAATTTCGTTCACTATAGCAGATTTTTTAACACAGTAGCGTTGCCAAGGAGGCTTGTAGTCCTTATTTTTTTGTCGATCGAACGATGGATATTGATTTTGAGTGGAAAAGGGGCATGTATTTTGGACCCCTAA

mRNA sequence

ATGTTGGAAGCAGAGACAATTCTTGAAGGGCTCAAATCAATTATTGATACATGCAAGCAATCCCTCATTCCTCTTGTTGTAGAATCGGATGCGCTGGAAGTTGTTAGACTTCTGAACGGAGAAGCTGAGGACTTGTCGGACGTGAAGACTATCTTAGACGCCATCTCCGCCCTCGCCTCCAATGCTCTAGCCATCAATTTCGTTCACTATAGCAGATTTTTTAACACAGTAGCGTTGCCAAGGAGGCTTGTAGTCCTTATTTTTTTGTCGATCGAACGATGGATATTGATTTTGAGTGGAAAAGGGGCATGTATTTTGGACCCCTAA

Coding sequence (CDS)

ATGTTGGAAGCAGAGACAATTCTTGAAGGGCTCAAATCAATTATTGATACATGCAAGCAATCCCTCATTCCTCTTGTTGTAGAATCGGATGCGCTGGAAGTTGTTAGACTTCTGAACGGAGAAGCTGAGGACTTGTCGGACGTGAAGACTATCTTAGACGCCATCTCCGCCCTCGCCTCCAATGCTCTAGCCATCAATTTCGTTCACTATAGCAGATTTTTTAACACAGTAGCGTTGCCAAGGAGGCTTGTAGTCCTTATTTTTTTGTCGATCGAACGATGGATATTGATTTTGAGTGGAAAAGGGGCATGTATTTTGGACCCCTAA

Protein sequence

MLEAETILEGLKSIIDTCKQSLIPLVVESDALEVVRLLNGEAEDLSDVKTILDAISALASNALAINFVHYSRFFNTVALPRRLVVLIFLSIERWILILSGKGACILDP
Homology
The following BLAST results are available for this feature:
BLAST of Lag0029596 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0029596 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 3..78
e-value: 1.6E-7
score: 31.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029596.1Lag0029596.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity