Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAAAGGCCTTCAAACCAAAGACAATCACAAGCCCAAGCCTCTTGTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAGCTCAATTCTCTCAAGCAACATCTTGATTCTGCCATAGCATCAAGAACTTTGTCCATGCCTCACCTATCCGACCGCCGCGCTCCGCTTCCCCCGCCGCCTCCGCCCCGGTGTGTGATGATGCCGGTGTCCAAAGCTTCTTCGAAGTTCTCTCGGTCCGTCTCGAAAGTCCTCCGGGCTCTTTTTCGATTGAAACCTAATTCCAATACCTCGATTTTTCGGGCTCAAGATCAACCCAGAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACGATCCCCGAAGTCCCCGAGGCCGACTTCGGAGCCGGTCTTTCGCCGGAGATTAGCTCCTTGGTGAGGAAGACGGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATGTTTGA mRNA sequence
ATGGAGAAAAAAGGCCTTCAAACCAAAGACAATCACAAGCCCAAGCCTCTTGTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAGCTCAATTCTCTCAAGCAACATCTTGATTCTGCCATAGCATCAAGAACTTTGTCCATGCCTCACCTATCCGACCGCCGCGCTCCGCTTCCCCCGCCGCCTCCGCCCCGGTGTGTGATGATGCCGGTGTCCAAAGCTTCTTCGAAGTTCTCTCGGTCCGTCTCGAAAGTCCTCCGGGCTCTTTTTCGATTGAAACCTAATTCCAATACCTCGATTTTTCGGGCTCAAGATCAACCCAGAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACGATCCCCGAAGTCCCCGAGGCCGACTTCGGAGCCGGTCTTTCGCCGGAGATTAGCTCCTTGGTGAGGAAGACGGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATGTTTGA Coding sequence (CDS)
ATGGAGAAAAAAGGCCTTCAAACCAAAGACAATCACAAGCCCAAGCCTCTTGTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAGCTCAATTCTCTCAAGCAACATCTTGATTCTGCCATAGCATCAAGAACTTTGTCCATGCCTCACCTATCCGACCGCCGCGCTCCGCTTCCCCCGCCGCCTCCGCCCCGGTGTGTGATGATGCCGGTGTCCAAAGCTTCTTCGAAGTTCTCTCGGTCCGTCTCGAAAGTCCTCCGGGCTCTTTTTCGATTGAAACCTAATTCCAATACCTCGATTTTTCGGGCTCAAGATCAACCCAGAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACGATCCCCGAAGTCCCCGAGGCCGACTTCGGAGCCGGTCTTTCGCCGGAGATTAGCTCCTTGGTGAGGAAGACGGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATGTTTGA Protein sequence
MEKKGLQTKDNHKPKPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPLPPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV
Homology
BLAST of Lag0019303.1 vs. NCBI nr
Match:
KAG7031166.1 (hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 255.8 bits (652), Expect = 2.6e-64
Identity = 134/164 (81.71%), Postives = 141/164 (85.98%), Query Frame = 0
Query: 1 MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60 MEK LQ K NH P P VWDCGSSLYDSFELNS KQHLDSAIASRTLSMPHLSDR P Sbjct: 1 MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDRPTPP 60 Query: 61 PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120 PPPPP CV P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG Sbjct: 61 PPPPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVG 120 Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164 SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+ Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 162
BLAST of Lag0019303.1 vs. NCBI nr
Match:
KAG6600527.1 (hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 255.0 bits (650), Expect = 4.4e-64
Identity = 133/164 (81.10%), Postives = 141/164 (85.98%), Query Frame = 0
Query: 1 MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60 MEK LQ K NH P P VWDCGSSLYDSFELNS KQHLDSA+ASRTLSMPHLSDR P Sbjct: 1 MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSALASRTLSMPHLSDRPTPP 60 Query: 61 PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120 PPPPP CV P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG Sbjct: 61 PPPPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVG 120 Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164 SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+ Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 162
BLAST of Lag0019303.1 vs. NCBI nr
Match:
XP_023544229.1 (uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 134/164 (81.71%), Postives = 141/164 (85.98%), Query Frame = 0
Query: 1 MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60 MEK LQ K NH P P VWDCGSSLYDSFELNS KQHLDSAIASRTLSMPHLSDR AP Sbjct: 1 MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDRPAPP 60 Query: 61 PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120 PP PP CV P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG Sbjct: 61 PPLPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVG 120 Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164 SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+ Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 162
BLAST of Lag0019303.1 vs. NCBI nr
Match:
XP_022942039.1 (uncharacterized protein LOC111447227 [Cucurbita moschata])
HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63
Identity = 134/164 (81.71%), Postives = 141/164 (85.98%), Query Frame = 0
Query: 1 MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60 MEK LQ K NH P P VWDCGSSLYDSFELNS KQHLDSAIASRTLSMPHLSDR P Sbjct: 1 MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDR--PA 60 Query: 61 PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120 PPPPP CV P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG Sbjct: 61 PPPPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSKTSIFRARDQPKDGFYVFYEVG 120 Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164 SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+ Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 160
BLAST of Lag0019303.1 vs. NCBI nr
Match:
XP_022989197.1 (uncharacterized protein LOC111486340 [Cucurbita maxima])
HSP 1 Score: 246.1 bits (627), Expect = 2.1e-61
Identity = 132/164 (80.49%), Postives = 139/164 (84.76%), Query Frame = 0
Query: 1 MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60 MEK LQTK NH P P VWDCGSSLYDSFELNS KQ LDSAIASRTLSMPHLSDR Sbjct: 1 MEKPTLQTKPNHSPNSPPVWDCGSSLYDSFELNSFKQQLDSAIASRTLSMPHLSDR---- 60 Query: 61 PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120 P PPP CV P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG Sbjct: 61 PAPPPHSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSKTSIFRARDQPKDGFYVFYEVG 120 Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164 SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+ Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 158
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAG7031166.1 2.6e-64 81.71 hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600527.1 4.4e-64 81.10 hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023544229.1 1.3e-63 81.71 uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo] [more]
XP_022942039.1 2.9e-63 81.71 uncharacterized protein LOC111447227 [Cucurbita moschata] [more]
XP_022989197.1 2.1e-61 80.49 uncharacterized protein LOC111486340 [Cucurbita maxima] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G G A G A A A A A A G G C C T T C A A A C C A A A G A C A A T C A C A A G C C C A A G C C T C T T G T G T G G G A C T G T G G A A G C T C T C T C T A T G A T T C C T T T G A G C T C A A T T C T C T C A A G C A A C A T C T T G A T T C T G C C A T A G C A T C A A G A A C T T T G T C C A T G C C T C A C C T A T C C G A C C G C C G C G C T C C G C T T C C C C C G C C G C C T C C G C C C C G G T G T G T G A T G A T G C C G G T G T C C A A A G C T T C T T C G A A G T T C T C T C G G T C C G T C T C G A A A G T C C T C C G G G C T C T T T T T C G A T T G A A A C C T A A T T C C A A T A C C T C G A T T T T T C G G G C T C A A G A T C A A C C C A G A G A T G G A T T T T A T G T C T T C T A T G A A G T C G G G T C G C T C T C G A C G A T C C C C G A A G T C C C C G A G G C C G A C T T C G G A G C C G G T C T T T C G C C G G A G A T T A G C T C C T T G G T G A G G A A G A C G G C T T C T G A G A G G T T C A C G G C T A A C T C C C T T G G C A T C T C T T T G A A T G T T T G A 50 100 150 200 250 300 350 400 450 Score = Score = Sequence PTHR33978:SF4 PTHR33978
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PANTHER PTHR33978:SF4 SERINE/THREONINE-KINASE coord: 7..160
None No IPR available PANTHER PTHR33978 SERINE/THREONINE-KINASE coord: 7..160
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name Unique Name Type
Lag0019303 Lag0019303 gene
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Lag0019303.1.exon1 Lag0019303.1.exon1 exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
cds.Lag0019303.1 cds.Lag0019303.1 CDS
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
Lag0019303.1 Lag0019303.1-protein polypeptide