Lag0019303 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019303
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Epimerase domain-containing protein
Location	chr5: 40836032 .. 40836523 (+)
RNA-Seq Expression	Lag0019303
Synteny	Lag0019303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAAAAGGCCTTCAAACCAAAGACAATCACAAGCCCAAGCCTCTTGTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAGCTCAATTCTCTCAAGCAACATCTTGATTCTGCCATAGCATCAAGAACTTTGTCCATGCCTCACCTATCCGACCGCCGCGCTCCGCTTCCCCCGCCGCCTCCGCCCCGGTGTGTGATGATGCCGGTGTCCAAAGCTTCTTCGAAGTTCTCTCGGTCCGTCTCGAAAGTCCTCCGGGCTCTTTTTCGATTGAAACCTAATTCCAATACCTCGATTTTTCGGGCTCAAGATCAACCCAGAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACGATCCCCGAAGTCCCCGAGGCCGACTTCGGAGCCGGTCTTTCGCCGGAGATTAGCTCCTTGGTGAGGAAGACGGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATGTTTGA

mRNA sequence

ATGGAGAAAAAAGGCCTTCAAACCAAAGACAATCACAAGCCCAAGCCTCTTGTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAGCTCAATTCTCTCAAGCAACATCTTGATTCTGCCATAGCATCAAGAACTTTGTCCATGCCTCACCTATCCGACCGCCGCGCTCCGCTTCCCCCGCCGCCTCCGCCCCGGTGTGTGATGATGCCGGTGTCCAAAGCTTCTTCGAAGTTCTCTCGGTCCGTCTCGAAAGTCCTCCGGGCTCTTTTTCGATTGAAACCTAATTCCAATACCTCGATTTTTCGGGCTCAAGATCAACCCAGAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACGATCCCCGAAGTCCCCGAGGCCGACTTCGGAGCCGGTCTTTCGCCGGAGATTAGCTCCTTGGTGAGGAAGACGGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATGTTTGA

Coding sequence (CDS)

ATGGAGAAAAAAGGCCTTCAAACCAAAGACAATCACAAGCCCAAGCCTCTTGTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAGCTCAATTCTCTCAAGCAACATCTTGATTCTGCCATAGCATCAAGAACTTTGTCCATGCCTCACCTATCCGACCGCCGCGCTCCGCTTCCCCCGCCGCCTCCGCCCCGGTGTGTGATGATGCCGGTGTCCAAAGCTTCTTCGAAGTTCTCTCGGTCCGTCTCGAAAGTCCTCCGGGCTCTTTTTCGATTGAAACCTAATTCCAATACCTCGATTTTTCGGGCTCAAGATCAACCCAGAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACGATCCCCGAAGTCCCCGAGGCCGACTTCGGAGCCGGTCTTTCGCCGGAGATTAGCTCCTTGGTGAGGAAGACGGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATGTTTGA

Protein sequence

MEKKGLQTKDNHKPKPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPLPPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV

Homology

[Close]

BLAST of Lag0019303 vs. NCBI nr
Match: KAG7031166.1 (hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.8 bits (652), Expect = 2.6e-64
Identity = 134/164 (81.71%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60
           MEK  LQ K NH P  P VWDCGSSLYDSFELNS KQHLDSAIASRTLSMPHLSDR  P 
Sbjct: 1   MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDRPTPP 60

Query: 61  PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120
           PPPPP  CV  P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG
Sbjct: 61  PPPPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVG 120

Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164
           SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+
Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 162

[Close]

BLAST of Lag0019303 vs. NCBI nr
Match: KAG6600527.1 (hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.0 bits (650), Expect = 4.4e-64
Identity = 133/164 (81.10%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60
           MEK  LQ K NH P  P VWDCGSSLYDSFELNS KQHLDSA+ASRTLSMPHLSDR  P 
Sbjct: 1   MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSALASRTLSMPHLSDRPTPP 60

Query: 61  PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120
           PPPPP  CV  P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG
Sbjct: 61  PPPPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVG 120

Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164
           SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+
Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 162

[Close]

BLAST of Lag0019303 vs. NCBI nr
Match: XP_023544229.1 (uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 134/164 (81.71%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60
           MEK  LQ K NH P  P VWDCGSSLYDSFELNS KQHLDSAIASRTLSMPHLSDR AP 
Sbjct: 1   MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDRPAPP 60

Query: 61  PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120
           PP PP  CV  P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG
Sbjct: 61  PPLPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVG 120

Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164
           SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+
Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 162

[Close]

BLAST of Lag0019303 vs. NCBI nr
Match: XP_022942039.1 (uncharacterized protein LOC111447227 [Cucurbita moschata])

HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63
Identity = 134/164 (81.71%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60
           MEK  LQ K NH P  P VWDCGSSLYDSFELNS KQHLDSAIASRTLSMPHLSDR  P 
Sbjct: 1   MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDR--PA 60

Query: 61  PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120
           PPPPP  CV  P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG
Sbjct: 61  PPPPPRSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSKTSIFRARDQPKDGFYVFYEVG 120

Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164
           SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+
Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 160

[Close]

BLAST of Lag0019303 vs. NCBI nr
Match: XP_022989197.1 (uncharacterized protein LOC111486340 [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-61
Identity = 132/164 (80.49%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 1   MEKKGLQTKDNHKP-KPLVWDCGSSLYDSFELNSLKQHLDSAIASRTLSMPHLSDRRAPL 60
           MEK  LQTK NH P  P VWDCGSSLYDSFELNS KQ LDSAIASRTLSMPHLSDR    
Sbjct: 1   MEKPTLQTKPNHSPNSPPVWDCGSSLYDSFELNSFKQQLDSAIASRTLSMPHLSDR---- 60

Query: 61  PPPPPPRCVMMPVSKASSKFSRSVSKVLRALFRLKPNSNTSIFRAQDQPRDGFYVFYEVG 120
           P PPP  CV  P+SKASSK SRS+ K+LR+LFR K NS TSIFRA+DQP+DGFYVFYEVG
Sbjct: 61  PAPPPHSCV--PMSKASSKLSRSLYKLLRSLFRPKSNSKTSIFRARDQPKDGFYVFYEVG 120

Query: 121 SLSTIPEVPEADFGAGLSPEISSLVRKTASERFTANSLGISLNV 164
           SLSTIPEVPEADFG GLSPEI SLVRKTASERFTANSLGISLN+
Sbjct: 121 SLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI 158

The following BLAST results are available for this feature:

BLAST of Lag0019303 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031166.1	2.6e-64	81.71	hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600527.1	4.4e-64	81.10	hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023544229.1	1.3e-63	81.71	uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo]	[more]
XP_022942039.1	2.9e-63	81.71	uncharacterized protein LOC111447227 [Cucurbita moschata]	[more]
XP_022989197.1	2.1e-61	80.49	uncharacterized protein LOC111486340 [Cucurbita maxima]	[more]

BLAST of Lag0019303 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33978:SF4	SERINE/THREONINE-KINASE	coord: 7..160
None	No IPR available	PANTHER	PTHR33978	SERINE/THREONINE-KINASE	coord: 7..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019303.1	Lag0019303.1	mRNA