Lag0015541.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0015541.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionSuccinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial
Locationchr12: 15580301 .. 15584798 (+)
Sequence length693
RNA-Seq ExpressionLag0015541.1
SyntenyLag0015541.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGCAAGAACACCAATTTGACTGGATACCACCAAAAAGTCTTCCCAGGTATTCTCTTGACAAATACTAGCTTGTGGGAGCTTCTTTTAAAAGGAAAAGGGAATGGATTACAGGGGCAATTGAAAAAAAAAGGTCCCTTTCAGTTTAGGGTTTGTAAAAAACGCCCCTTTTTTGAAAACTTGTTTTTATGGACCCCTAGCTATATTAAAAGACTATAATATCCTCAATGTTTTGAACCCCTCAATTTCTACTCTACCATTGTCATTGATAGACAAATTTCAATACTTAATATCACTACTACAAATTTGATCTTTATTGACGCTTGTGTCAAAACAGCGTCAATAAACATAATTTTTGTACTTTAAAATAAATTATTAATAATTAAATAGATATATTGACGGTTTTATGGTATCAAGATATGATATGACTTATGTTGACGGCCAAAAAAACGTCAATAAATGTGATTAAAAATGTAGTTTACGTAGATTTTCGTCCAACTCTGCCTTTTCACATAGTTGACGGACAAACACCATTAATGAAAATAGTTTTGTTACCGGTTTTTATTGACGCTTATTAGCCGTCAATGAAAACCGCATTCATTGACAACTAATAAGTATCAATAAACATTACTATATTGACGTGCAATAAATGTCAATATTAATGGGAGTTTCTTGACGGGTATTAAACGTAAAAAAAATTTAAGTTCTTTTGGGATTTTGGATTAAAGTTTAAATTACTCCCAAATTTGAAATTATTTTAGGATTTTAAATTTATTTCTCCATCTCTTCCTTATTCTCCTCCTTCTTCTCCAACACCTTTTTCTTCATCAACACTGACGCCCGCCCACCGCTAGCGATTTTTGTCGCCGCCACCGACCTTTTTGTTTTGTTTTTTTTTTTTAAAAAAAGAAAATGTAGAGAAAGAGAAAGAAAAGAGAAGAAAAGAGAGACAAAAAAAATTGTTGATGAAGGAGGAGAAGAAGAGGGGGAGAGAAAGAAATAAAAATAAAAATAAAAATAATATTATTTTATTGTTTTAATATATTGTAACGACTGCATTAAACGTAAATCTTATTTTTTTTTTCTCTAATTTGAGTCTAACTTCATGAAATTGATGGAGATTTATTTAGAGCCTCACGTAGCCTTCCCCTTCTCACGCGAGTTTCAGCCGTCCAAGCCCTTCTTCCAGCCGTTTTCTTCTTCTTAGTTTCATCCAACCAGCCGTGCGCCACCATACCTTCAAGCCCCGACCACCACTTTGCAACCAGCATTCTCCGGCGAGCAGCTGCGGCGTTTCCGGCGTGCACAGGTCTTCGACGCGAGCGGCACAAAAACAGATCGTGAGGGGCGGTTTTTCGCGTGCGGTAGGTTGCTCTCACTCTCGGTTTTGTGTTTTTCTTGCCTATACCTCGTTCTCCATCTCCCACTCTCGGTTTTCAACAGGTTTCGGGCTCGAAGAAGGCTGTTTTTACATCTTTCCGGTGACTATGCAGTGTTGGGCGCGGACAGCAGCGTTTGGGGATCGTTTCCTCTGATTTTCCGGCGTTTTTTGCAGTGGGTAAGCGCGTAGGATATGTTTCTTGGTTGATTATTAAGTTTAATCGAATACCCACTCGTTTTTACTTTCGTTCAGCTAGTGTTTCTCTTCAATTTTGAAGTGTTTAATCGTTTGGATTTTGCATCCCAAGCTAAAAGTATGGTTACAGTTCTATTACATGCATGTTGAATATTTGTACCAATCAAACTAGTGACTGAGTTAGTTCATTTAACCGCCTATTCAAATTGCTAAACAAATATAATATATATGAATTTCAGGTGCGAGTTAAGGTTGCTTTAAACAAACAATCTAAAACTAGATTGATTGGCCCCAAATGCCCTGACATTATCAAGCCTGGAGAGTGTAAAATTGGAATTATGCTTGGATACATCCATAAATCTGAACGCATTGGCATTATGTCACGATCTAGTACCTTGACTTAGGAAGCGGTGAGTTCTAATTTTTGTCATATCTATCAAGTGATAGATTCTTCTGTAATCTTTCTTTTATCAATATATTATTTGTTCTTTATTAGAGGAAAAAGAACTTATGGGAAAGATCACAAATGTATATCAGCTATCAGATTTAATTTTCATTTTGTTTTTATGATTTATTGACATAGAAGACAAGTATAGTGAAATGGTCTATGTGTATCAGCACAACTTTATACTTGCTCCTACCAATGTGGAATGACTTATTAACTTATTCTCTTCTATAGAGAATTGTCTAGTGTTCTTTGTCCTTATTGATTTTACTCTTAGTTTACTGAAGGGTAAATCCGTTCTTTTTTTTTCTTTTTTTGTGGAGGGGACTATGCCTCTTTACCATGTTACTATTTTGAAAGTAAAACATATTTGTATATATATAAAAATTTCCCTGTGATATGCAATGATTCTCGTACTTGTATTTCATTTCCCCATTTTATGCCTTTAGGTTTTCCAAACAATTATTGTTGTTGGCCTTGGACAATCCACATGCGTAGGTATTGGAGGAGATCCCTTTAATGGGACAAACTTTGTTGATTGCATCAAGAAGTTCCTTGTTGATCCTCAGACAGAAGGTAATTCTTGTTTTGATTTATTGGTCTGTTATCCAAATTCTTACTACATGATTCTATTTGGAAAAAAATGATGAATCCTGATACACGAACGATATATATACGTCTTTCCCCCAATCAATCCTGATACACAAACTATTATGAATATTTGCATGTCTCTTTTAGCCTATCTAATATGCACTTCTACTTTTTCTCGTCGCCTACCTTCTCATGCTTTTGGCATGTGAGATCGGTTCATGTTTTTTAGCCCATTGTACTATTGTAGGATAATATTTCAAAAGTACAAGACTATGGATTGTTGTTGGGTTTGTAAGCTTAGATATTCTTTTATGTGGAGTTAAGAATGTGGAGTTAAGAATGGATTTAATATCCTACGGTATAATATATTATGAATGGATTTAATATCCTACGGATTTTCTTGGCAACCAAAATGTAGTAGGATCAGACGATTGTCTCATGAGATTAGTCGAGGTGCACGTAAGCTGGCTCGAACACTCACGAATATATAAAAAAAAAAAAAAGAAAGAAGAATAGATGATAATAAATTGACTCGATTGGAGAATGATGTTTAGTTACTATTTCTTTTCTCCGCTTGTTCTAATTTTTTTATGGACCATGGTAAATATTATTAATTACAAGAAAGGGATGGTGATCTCTAGAGTTTGATACAATGCCTCATGCATCTCAGGGATTGTTCTAATTGGAGAAATAAGTGGAACTGCGAAAGAGGATGATGCTGCTTTGATAAAGGTTCTGTCCATTTTTTTTATCAGTATGGCTGAACATATTTTATTTGGGCTCATCTTTATCAAATACTTGTAGGTCCATTGCTACTTTTATAGATTAGCTCTTAGATTTATTCAATCTCCTTCAAAGATTTACTGTATAATGTATTTCTGAACTGTTATATTCATATTTTATTGCTCATTTAAATTTTTTGTTACAATCCTTCAGAAATGTCATGGATTATTTGAGCTACACGAAGAACATTTTTTCCTCATCCATTGCATAATTGCATTAGGGATAGGGATAATGGTCAATTGCTTTGAGAACAAGACTTTCGTTGACTTTTAGGAGGAAATTTTGAAACAAATAATATTTGCATTGGCACCCTAAGAAACTTTCATATATCATTGCTGCTATTACTTAAATGCTTAAATTATCCTCATGCTGCTTTGCTAAAATGCTTAAATTATGTCATTTGGTGACAAAATGCTTAAATTATGTCATTTGGTGGCGAATTGAATATTCAGTTTTTAACATTATAGTTTGAATGCATATTTAAACATTATATACCAACATAAGAATGATATTGTTATTGCTATTCTGTAAAATTGCTGGTGGAGAACCTCACTCCGAACTGTATGCAAATTAGTTTTACAAACTTATTGGTTTGTTATTTGCTTTGCTCCCAGTTTTGGGTGGTCACAATGTTCTTCTTTTAGGAATGATATCTATGGGAAAGTTGTAAGTCAATGTTCTCCTCTTTTGATCCTTTTGTATGTAAATGTTCTGAACATTGAGCTTGAAAATATCACAAAATAAAATTGATTATAGAAGGCTTTAGTAGATTTATGTAATAGGTTTTCTTTGAAAAGTTGGACCTCTTAATAGGTTTGTTGAGTTGGTGCAACATGACGTAAACTGCAAGCAATATATTGCTTTAACCTTTTTCAGTGCAGTGATAAGTTGTGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGTTAGAGTTATGATATCTACCACTGACTTCAATCAACATACTTTAGATCAGGTACTCCCTTGACAATGCATACGGTCAGTTCCTTTGTTGTTGTGTTCTATTTGTCATAGGCCAAAACCAAAGCAAAGGCAAAGGAAGCTGCTCAAAGGCTGCTAAGTGATCGTTTTGAGTTTAGATGA

mRNA sequence

ATGATCAGCAAGAACACCAATTTGACTGGATACCACCAAAAAGTCTTCCCAGCCGTCCAAGCCCTTCTTCCAGCCGTTTTCTTCTTCTTAGTTTCATCCAACCAGCCGTGCGCCACCATACCTTCAAGCCCCGACCACCACTTTGCAACCAGCATTCTCCGGCGAGCAGCTGCGGCGTTTCCGGCGTGCACAGGTCTTCGACGCGAGCGGCACAAAAACAGATCGTTTCGGGCTCGAAGAAGGCTGTTTTTACATCTTTCCGGTGACTATGCAGTGTTGGGCGCGGACAGCAGCGTTTGGGGATCGTTTCCTCTGATTTTCCGGCGTTTTTTGCAGTGGGTTTTCCAAACAATTATTGTTGTTGGCCTTGGACAATCCACATGCGTAGGTATTGGAGGAGATCCCTTTAATGGGACAAACTTTGTTGATTGCATCAAGAAGTTCCTTGTTGATCCTCAGACAGAAGGGATTGTTCTAATTGGAGAAATAAGTGGAACTGCGAAAGAGGATGATGCTGCTTTGATAAAGTGCAGTGATAAGTTGTGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGTTAGAGTTATGATATCTACCACTGACTTCAATCAACATACTTTAGATCAGGCCAAAACCAAAGCAAAGGCAAAGGAAGCTGCTCAAAGGCTGCTAAGTGATCGTTTTGAGTTTAGATGA

Coding sequence (CDS)

ATGATCAGCAAGAACACCAATTTGACTGGATACCACCAAAAAGTCTTCCCAGCCGTCCAAGCCCTTCTTCCAGCCGTTTTCTTCTTCTTAGTTTCATCCAACCAGCCGTGCGCCACCATACCTTCAAGCCCCGACCACCACTTTGCAACCAGCATTCTCCGGCGAGCAGCTGCGGCGTTTCCGGCGTGCACAGGTCTTCGACGCGAGCGGCACAAAAACAGATCGTTTCGGGCTCGAAGAAGGCTGTTTTTACATCTTTCCGGTGACTATGCAGTGTTGGGCGCGGACAGCAGCGTTTGGGGATCGTTTCCTCTGATTTTCCGGCGTTTTTTGCAGTGGGTTTTCCAAACAATTATTGTTGTTGGCCTTGGACAATCCACATGCGTAGGTATTGGAGGAGATCCCTTTAATGGGACAAACTTTGTTGATTGCATCAAGAAGTTCCTTGTTGATCCTCAGACAGAAGGGATTGTTCTAATTGGAGAAATAAGTGGAACTGCGAAAGAGGATGATGCTGCTTTGATAAAGTGCAGTGATAAGTTGTGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGTTAGAGTTATGATATCTACCACTGACTTCAATCAACATACTTTAGATCAGGCCAAAACCAAAGCAAAGGCAAAGGAAGCTGCTCAAAGGCTGCTAAGTGATCGTTTTGAGTTTAGATGA

Protein sequence

MISKNTNLTGYHQKVFPAVQALLPAVFFFLVSSNQPCATIPSSPDHHFATSILRRAAAAFPACTGLRRERHKNRSFRARRRLFLHLSGDYAVLGADSSVWGSFPLIFRRFLQWVFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAKTKAKAKEAAQRLLSDRFEFR
Homology
[Close]
BLAST of Lag0015541.1 vs. NCBI nr
Match: TXG51810.1 (hypothetical protein EZV62_024334 [Acer yangbiense])

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-22
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 210 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIVLIGEIGGTAEEDAAA 269

Query: 174 LIKCS 179
           LIK S
Sbjct: 270 LIKAS 273

[Close]
BLAST of Lag0015541.1 vs. NCBI nr
Match: KAG6418589.1 (hypothetical protein SASPL_120793 [Salvia splendens])

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-22
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 197 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLVDPQTEGIVLIGEIGGTAEEDAAA 256

Query: 174 LIKCSD-KLCLSLELGSFV 192
           LIK  D  L +S  L  F+
Sbjct: 257 LIKVIDYSLTVSFSLFKFL 274

[Close]
BLAST of Lag0015541.1 vs. NCBI nr
Match: XP_009606229.1 (succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-like [Nicotiana tomentosiformis])

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-22
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = 0 

Query: 90  YAVLGADSSVWGSFPLIFRRFLQWVFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFL 149
           +++LG++S+ +     +  R +  VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF+
Sbjct: 22  HSLLGSESANFFFACFMKSRSILLVFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFI 81

Query: 150 VDPQTEGIVLIGEISGTAKEDDAALIK 177
            DPQTEGIVLIGEI GTA+ED AALIK
Sbjct: 82  ADPQTEGIVLIGEIGGTAEEDAAALIK 107

[Close]
BLAST of Lag0015541.1 vs. NCBI nr
Match: XP_031258001.1 (succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [Pistacia vera])

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-22
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 199 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIVLIGEIGGTAEEDAAA 258

Query: 174 LIKCS 179
           LIK S
Sbjct: 259 LIKAS 262

[Close]
BLAST of Lag0015541.1 vs. NCBI nr
Match: KMZ72542.1 (Succinate--CoA ligase (ADP-forming) [Zostera marina])

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-21
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+KKFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 202 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLKKFLVDPQTEGIVLIGEIGGTAEEDAAA 261

Query: 174 LIK 177
           LIK
Sbjct: 262 LIK 263

[Close]
BLAST of Lag0015541.1 vs. ExPASy Swiss-Prot
Match: P68209 (Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08300 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AA
Sbjct: 212 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAA 271

Query: 174 LIKCS 179
           LIK S
Sbjct: 272 LIKAS 275

[Close]
BLAST of Lag0015541.1 vs. ExPASy Swiss-Prot
Match: Q8LAD2 (Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g23250 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AA
Sbjct: 207 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAA 266

Query: 174 LIK 177
           LIK
Sbjct: 267 LIK 268

[Close]
BLAST of Lag0015541.1 vs. ExPASy Swiss-Prot
Match: Q8GTQ9 (Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial OS=Solanum lycopersicum OX=4081 GN=SCOA PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-23
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF+ DPQTEGIVLIGEI GTA+ED AA
Sbjct: 199 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGEIGGTAEEDAAA 258

Query: 174 LIK 177
           LIK
Sbjct: 259 LIK 260

[Close]
BLAST of Lag0015541.1 vs. ExPASy Swiss-Prot
Match: Q6DQL1 (Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial OS=Solanum lycopersicum OX=4081 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-23
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+++F+ DPQTEGIVLIGEI GTA+ED AA
Sbjct: 204 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLERFIADPQTEGIVLIGEIGGTAEEDAAA 263

Query: 174 LIK 177
           LIK
Sbjct: 264 LIK 265

[Close]
BLAST of Lag0015541.1 vs. ExPASy Swiss-Prot
Match: Q6ZL94 (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0577700 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.7e-22
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF+ DPQTEGIVLIGEI GTA+ED AA
Sbjct: 197 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAA 256

Query: 174 LIK 177
            I+
Sbjct: 257 FIQ 258

[Close]
BLAST of Lag0015541.1 vs. ExPASy TrEMBL
Match: A0A5C7H478 (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Acer yangbiense OX=1000413 GN=EZV62_024334 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.7e-22
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 210 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIVLIGEIGGTAEEDAAA 269

Query: 174 LIKCS 179
           LIK S
Sbjct: 270 LIKAS 273

[Close]
BLAST of Lag0015541.1 vs. ExPASy TrEMBL
Match: A0A4D8Z469 (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Salvia splendens OX=180675 GN=LSC1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.7e-22
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 206 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLVDPQTEGIVLIGEIGGTAEEDAAA 265

Query: 174 LIKCSD-KLCLSLELGSFV 192
           LIK  D  L +S  L  F+
Sbjct: 266 LIKVIDYSLTVSFSLFKFL 283

[Close]
BLAST of Lag0015541.1 vs. ExPASy TrEMBL
Match: A0A0K9PWA8 (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Zostera marina OX=29655 GN=ZOSMA_162G00650 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.9e-22
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+KKFLVDPQTEGIVLIGEI GTA+ED AA
Sbjct: 202 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLKKFLVDPQTEGIVLIGEIGGTAEEDAAA 261

Query: 174 LIK 177
           LIK
Sbjct: 262 LIK 263

[Close]
BLAST of Lag0015541.1 vs. ExPASy TrEMBL
Match: A0A2P5ABW6 (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Parasponia andersonii OX=3476 GN=PanWU01x14_348060 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-22
Identity = 58/74 (78.38%), Postives = 62/74 (83.78%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGI+LIGEI GTA+ED AA
Sbjct: 205 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIILIGEIGGTAEEDAAA 264

Query: 174 LIKCSDKLCLSLEL 188
           LIK   +  LS  L
Sbjct: 265 LIKALSEDILSFLL 277

[Close]
BLAST of Lag0015541.1 vs. ExPASy TrEMBL
Match: A0A6A6N8Y7 (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Hevea brasiliensis OX=3981 GN=GH714_024463 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-22
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+KKFLVDPQTEGI+LIGEI GTA+ED AA
Sbjct: 184 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLKKFLVDPQTEGIILIGEIGGTAEEDAAA 243

Query: 174 LIK 177
           LIK
Sbjct: 244 LIK 245

[Close]
BLAST of Lag0015541.1 vs. TAIR 10
Match: AT5G08300.1 (Succinyl-CoA ligase, alpha subunit )

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-25
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AA
Sbjct: 212 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAA 271

Query: 174 LIKCS 179
           LIK S
Sbjct: 272 LIKAS 275

[Close]
BLAST of Lag0015541.1 vs. TAIR 10
Match: AT5G23250.1 (Succinyl-CoA ligase, alpha subunit )

HSP 1 Score: 111.7 bits (278), Expect = 7.9e-25
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AA
Sbjct: 207 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAA 266

Query: 174 LIK 177
           LIK
Sbjct: 267 LIK 268

[Close]
BLAST of Lag0015541.1 vs. TAIR 10
Match: AT5G23250.2 (Succinyl-CoA ligase, alpha subunit )

HSP 1 Score: 111.7 bits (278), Expect = 7.9e-25
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 114 VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAA 173
           VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AA
Sbjct: 207 VFQT-TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAA 266

Query: 174 LIK 177
           LIK
Sbjct: 267 LIK 268

[Close]
BLAST of Lag0015541.1 vs. TAIR 10
Match: AT5G51710.1 (K+ efflux antiporter 5 )

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-07
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 177 CSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAK 211
           CSDKL LSLELGSFV  VM+STT+F QHTL+Q +
Sbjct: 385 CSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVE 418

[Close]
BLAST of Lag0015541.1 vs. TAIR 10
Match: AT5G51710.2 (K+ efflux antiporter 5 )

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-07
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 177 CSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAK 211
           CSDKL LSLELGSFV  VM+STT+F QHTL+Q +
Sbjct: 385 CSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVE 418

The following BLAST results are available for this feature:
BLAST of Lag0015541.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TXG51810.17.7e-2287.69hypothetical protein EZV62_024334 [Acer yangbiense][more]
KAG6418589.17.7e-2275.95hypothetical protein SASPL_120793 [Salvia splendens][more]
XP_009606229.17.7e-2265.52succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-like [Nicotia... [more]
XP_031258001.17.7e-2287.69succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [Pistacia vera][more]
KMZ72542.11.0e-2188.89Succinate--CoA ligase (ADP-forming) [Zostera marina][more]
BLAST of Lag0015541.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P682095.0e-2484.62Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial OS=Arabidopsi... [more]
Q8LAD21.1e-2385.71Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial OS=Arabidopsi... [more]
Q8GTQ91.9e-2384.13Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial OS=Solanum ly... [more]
Q6DQL14.2e-2382.54Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial OS=Solanum ly... [more]
Q6ZL944.7e-2280.95Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa... [more]
BLAST of Lag0015541.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5C7H4783.7e-2287.69Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Acer yangbie... [more]
A0A4D8Z4693.7e-2275.95Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Salvia splen... [more]
A0A0K9PWA84.9e-2288.89Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Zostera mari... [more]
A0A2P5ABW66.4e-2278.38Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Parasponia a... [more]
A0A6A6N8Y76.4e-2287.30Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Hevea brasil... [more]
BLAST of Lag0015541.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08300.13.6e-2584.62Succinyl-CoA ligase, alpha subunit [more]
AT5G23250.17.9e-2585.71Succinyl-CoA ligase, alpha subunit [more]
AT5G23250.27.9e-2585.71Succinyl-CoA ligase, alpha subunit [more]
AT5G51710.15.7e-0773.53K+ efflux antiporter 5 [more]
AT5G51710.25.7e-0773.53K+ efflux antiporter 5 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01798SCOASYNTHASEcoord: 161..174
score: 53.05
coord: 130..148
score: 63.24
NoneNo IPR availablePANTHERPTHR11117:SF19SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT ALPHA-1, MITOCHONDRIALcoord: 113..179
NoneNo IPR availablePANTHERPTHR11117SUCCINYL-COA LIGASE SUBUNIT ALPHAcoord: 113..179
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 120..182
e-value: 3.6E-7
score: 30.1
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 108..228
e-value: 6.8E-18
score: 66.6
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 116..219

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0015541Lag0015541gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0015541.1.exon1Lag0015541.1.exon1exon
Lag0015541.1.exon2Lag0015541.1.exon2exon
Lag0015541.1.exon3Lag0015541.1.exon3exon
Lag0015541.1.exon4Lag0015541.1.exon4exon
Lag0015541.1.exon5Lag0015541.1.exon5exon
Lag0015541.1.exon6Lag0015541.1.exon6exon
Lag0015541.1.exon7Lag0015541.1.exon7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0015541.1cds.Lag0015541.1CDS
cds.Lag0015541.1cds.Lag0015541.1_2CDS
cds.Lag0015541.1cds.Lag0015541.1_3CDS
cds.Lag0015541.1cds.Lag0015541.1_4CDS
cds.Lag0015541.1cds.Lag0015541.1_5CDS
cds.Lag0015541.1cds.Lag0015541.1_6CDS
cds.Lag0015541.1cds.Lag0015541.1_7CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0015541.1Lag0015541.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009361 succinate-CoA ligase complex (ADP-forming)
molecular_function GO:0003824 catalytic activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004775 succinate-CoA ligase (ADP-forming) activity
molecular_function GO:0004776 succinate-CoA ligase (GDP-forming) activity