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IVF0016913.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAACAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATAGAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTGACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGGAAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAACAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATAGAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTGACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGGAAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAACAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATAGAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTGACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGGAAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNFEEGILKTKIGKKVGPSNIDNVVNLSTIK Homology
BLAST of IVF0016913.2 vs. ExPASy TrEMBL
Match: A0A5A7SVB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002840 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39 Identity = 90/137 (65.69%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of IVF0016913.2 vs. ExPASy TrEMBL
Match: A0A5A7UAM6 (Receptor-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00920 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38 Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 0
BLAST of IVF0016913.2 vs. ExPASy TrEMBL
Match: A0A5A7UA03 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00400 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 4.5e-38 Identity = 86/137 (62.77%), Postives = 108/137 (78.83%), Query Frame = 0
BLAST of IVF0016913.2 vs. ExPASy TrEMBL
Match: A0A5D3BN48 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00240 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37 Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of IVF0016913.2 vs. ExPASy TrEMBL
Match: A0A5D3BI07 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00650 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37 Identity = 86/134 (64.18%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of IVF0016913.2 vs. NCBI nr
Match: KAA0035182.1 (uncharacterized protein E6C27_scaffold57G002840 [Cucumis melo var. makuwa]) HSP 1 Score: 171 bits (434), Expect = 3.19e-50 Identity = 90/137 (65.69%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of IVF0016913.2 vs. NCBI nr
Match: KAA0052278.1 (Receptor-like protein 12 [Cucumis melo var. makuwa] >TYK01844.1 Receptor-like protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (424), Expect = 7.50e-49 Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 0
BLAST of IVF0016913.2 vs. NCBI nr
Match: TYJ98757.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 164 bits (414), Expect = 9.17e-48 Identity = 86/134 (64.18%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of IVF0016913.2 vs. NCBI nr
Match: KAA0054430.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK14606.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 163 bits (412), Expect = 1.68e-47 Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of IVF0016913.2 vs. NCBI nr
Match: KAA0052069.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00684.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 164 bits (416), Expect = 3.36e-47 Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of IVF0016913.2 vs. TAIR 10
Match: AT1G22260.1 (Myosin heavy chain-related protein ) HSP 1 Score: 41.6 bits (96), Expect = 7.2e-04 Identity = 32/120 (26.67%), Postives = 52/120 (43.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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