Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAACAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATAGAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTGACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGGAAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG
mRNA sequence
ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAACAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATAGAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTGACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGGAAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG
Coding sequence (CDS)
ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAACAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATAGAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTGACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGGAAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG
Protein sequence
MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNFEEGILKTKIGKKVGPSNIDNVVNLSTIK
Homology
BLAST of IVF0016913 vs. ExPASy TrEMBL
Match:
A0A5A7SVB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002840 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 90/137 (65.69%), Postives = 106/137 (77.37%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
+A+YN RVLEIAN SFNL ++I ESK+VRK+L SL K DM T IEEAHDIT LKLDEL
Sbjct: 7 VAEYNERVLEIANGSFNLGEKISESKIVRKMLLSLPGKIDMKVTAIEEAHDITKLKLDEL 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
FGSLLTFEM I NRE+ KG G+A K++++EE DN N NE IALLTKQ+SKVVKK
Sbjct: 67 FGSLLTFEMTISNRENKKGTGVASKSVYEEESTDNKSPSVANVNEFIALLTKQFSKVVKK 126
Query: 121 FRNMDTDGSNYRDQNNF 138
F+NM+T GSN R+ NF
Sbjct: 127 FKNMNTTGSNSRNSINF 143
BLAST of IVF0016913 vs. ExPASy TrEMBL
Match:
A0A5A7UAM6 (Receptor-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00920 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38
Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
+ +YN +VLEI NESFNL ++IP+SK+VRKVLRSL KF+M T I+EAHDIT LKLD
Sbjct: 7 VVEYNEKVLEIPNESFNLGEKIPKSKIVRKVLRSLPGKFNMKVTAIKEAHDITKLKLDNF 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
F SLLTFEM I NRE+ KGKG+AFK++++EE DN S N NE IALL K +SKVVKK
Sbjct: 67 FESLLTFEMTISNRENKKGKGVAFKSVYEEESTDNKSSSEANVNESIALLMKLFSKVVKK 126
Query: 121 FRNMDTDGSNYRDQNNFE 139
FRN++ GSN R+ NF+
Sbjct: 127 FRNLNIVGSNSRNSMNFK 144
BLAST of IVF0016913 vs. ExPASy TrEMBL
Match:
A0A5A7UA03 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00400 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 4.5e-38
Identity = 86/137 (62.77%), Postives = 108/137 (78.83%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
++ YN RVLEIANES L ++IP+SK+VRKVLRSL KFDM T IEEAHDIT LKLDEL
Sbjct: 7 VSDYNERVLEIANESLLLGEKIPDSKIVRKVLRSLPRKFDMKVTAIEEAHDITTLKLDEL 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
F SLLTFEMAI +RE+ KGKG+AFK+I++EE N N NE IALL +Q+SKVV+K
Sbjct: 67 FWSLLTFEMAISDRENKKGKGVAFKSIYEEETTVNQSDNEANMNESIALLMEQFSKVVRK 126
Query: 121 FRNMDTDGSNYRDQNNF 138
F+N++T GSN ++ N++
Sbjct: 127 FKNVNTTGSNDQNPNHY 143
BLAST of IVF0016913 vs. ExPASy TrEMBL
Match:
A0A5D3BN48 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00240 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
++ YN RVLEIANES L ++IP+SK+V K+L+SL KFDM T IEEAHDIT LKLDEL
Sbjct: 7 VSNYNERVLEIANESLLLGEKIPKSKIVGKILQSLQGKFDMKVTAIEEAHDITKLKLDEL 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
FGSLLTFE+ I ++ED KGKGIAFK I++EE N N NE IALLTKQ+SKVVKK
Sbjct: 67 FGSLLTFEITISHKEDKKGKGIAFKPIYEEETTVNLSDNVANMNESIALLTKQFSKVVKK 126
Query: 121 FRNMDTDGSNYRDQNNF 138
F+N++T GSN ++ N+
Sbjct: 127 FKNLNTTGSNAQNLTNY 143
BLAST of IVF0016913 vs. ExPASy TrEMBL
Match:
A0A5D3BI07 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00650 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37
Identity = 86/134 (64.18%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 4 YNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGS 63
YN RVLEIANESFNL +RI ES +V KVL SL KFDM T IEEAHDI LKL+ELFGS
Sbjct: 10 YNERVLEIANESFNLGERIRESMIVCKVLLSLPGKFDMKVTAIEEAHDIPKLKLNELFGS 69
Query: 64 LLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKKFRN 123
L TFEMA ++D KGKG+AFK +++EE ++N + N NE IALLTKQ+SKVVKKF N
Sbjct: 70 LTTFEMATSKKDDKKGKGVAFKTVYEEETPNHNTTNEVNVNESIALLTKQFSKVVKKFIN 129
Query: 124 MDTDGSNYRDQNNF 138
M+T G+ R+QN+F
Sbjct: 130 MNTTGAGVREQNSF 143
BLAST of IVF0016913 vs. NCBI nr
Match:
KAA0035182.1 (uncharacterized protein E6C27_scaffold57G002840 [Cucumis melo var. makuwa])
HSP 1 Score: 171 bits (434), Expect = 3.19e-50
Identity = 90/137 (65.69%), Postives = 106/137 (77.37%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
+A+YN RVLEIAN SFNL ++I ESK+VRK+L SL K DM T IEEAHDIT LKLDEL
Sbjct: 7 VAEYNERVLEIANGSFNLGEKISESKIVRKMLLSLPGKIDMKVTAIEEAHDITKLKLDEL 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
FGSLLTFEM I NRE+ KG G+A K++++EE DN N NE IALLTKQ+SKVVKK
Sbjct: 67 FGSLLTFEMTISNRENKKGTGVASKSVYEEESTDNKSPSVANVNEFIALLTKQFSKVVKK 126
Query: 121 FRNMDTDGSNYRDQNNF 137
F+NM+T GSN R+ NF
Sbjct: 127 FKNMNTTGSNSRNSINF 143
BLAST of IVF0016913 vs. NCBI nr
Match:
KAA0052278.1 (Receptor-like protein 12 [Cucumis melo var. makuwa] >TYK01844.1 Receptor-like protein 12 [Cucumis melo var. makuwa])
HSP 1 Score: 167 bits (424), Expect = 7.50e-49
Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
+ +YN +VLEI NESFNL ++IP+SK+VRKVLRSL KF+M T I+EAHDIT LKLD
Sbjct: 7 VVEYNEKVLEIPNESFNLGEKIPKSKIVRKVLRSLPGKFNMKVTAIKEAHDITKLKLDNF 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
F SLLTFEM I NRE+ KGKG+AFK++++EE DN S N NE IALL K +SKVVKK
Sbjct: 67 FESLLTFEMTISNRENKKGKGVAFKSVYEEESTDNKSSSEANVNESIALLMKLFSKVVKK 126
Query: 121 FRNMDTDGSNYRDQNNFE 138
FRN++ GSN R+ NF+
Sbjct: 127 FRNLNIVGSNSRNSMNFK 144
BLAST of IVF0016913 vs. NCBI nr
Match:
TYJ98757.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 164 bits (414), Expect = 9.17e-48
Identity = 86/134 (64.18%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 4 YNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGS 63
YN RVLEIANESFNL +RI ES +V KVL SL KFDM T IEEAHDI LKL+ELFGS
Sbjct: 10 YNERVLEIANESFNLGERIRESMIVCKVLLSLPGKFDMKVTAIEEAHDIPKLKLNELFGS 69
Query: 64 LLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKKFRN 123
L TFEMA ++D KGKG+AFK +++EE ++N + N NE IALLTKQ+SKVVKKF N
Sbjct: 70 LTTFEMATSKKDDKKGKGVAFKTVYEEETPNHNTTNEVNVNESIALLTKQFSKVVKKFIN 129
Query: 124 MDTDGSNYRDQNNF 137
M+T G+ R+QN+F
Sbjct: 130 MNTTGAGVREQNSF 143
BLAST of IVF0016913 vs. NCBI nr
Match:
KAA0054430.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK14606.1 gag-proteinase polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 163 bits (412), Expect = 1.68e-47
Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
+A YN RV+EIANESFNL I E K+VRKVLRSL KFDM I+E HDIT LKLDEL
Sbjct: 7 VANYNERVMEIANESFNLGKEILEYKIVRKVLRSLPGKFDMKVIAIQETHDITTLKLDEL 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
F SLL FEM I NRED KGKGIAFK+I++EE DN + N NE L+TK++SKVVK+
Sbjct: 67 FESLLNFEMTISNREDKKGKGIAFKSIYEEESADNKLASEANVNESTTLVTKKFSKVVKR 126
Query: 121 FRNMDTDGSNYRDQNNF 137
FRNM++ GSN R+ F
Sbjct: 127 FRNMNSTGSNTRNSITF 143
BLAST of IVF0016913 vs. NCBI nr
Match:
KAA0052069.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00684.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 164 bits (416), Expect = 3.36e-47
Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 0
Query: 1 MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDEL 60
++ YN RVLEIANES L ++IP+SK+V K+L+SL KFDM T IEEAHDIT LKLDEL
Sbjct: 7 VSNYNERVLEIANESLLLGEKIPKSKIVGKILQSLQGKFDMKVTAIEEAHDITKLKLDEL 66
Query: 61 FGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKK 120
FGSLLTFE+ I ++ED KGKGIAFK I++EE N N NE IALLTKQ+SKVVKK
Sbjct: 67 FGSLLTFEITISHKEDKKGKGIAFKPIYEEETTVNLSDNVANMNESIALLTKQFSKVVKK 126
Query: 121 FRNMDTDGSNYRDQNNF 137
F+N++T GSN ++ N+
Sbjct: 127 FKNLNTTGSNAQNLTNY 143
BLAST of IVF0016913 vs. TAIR 10
Match:
AT1G22260.1 (Myosin heavy chain-related protein )
HSP 1 Score: 41.6 bits (96), Expect = 7.2e-04
Identity = 32/120 (26.67%), Postives = 52/120 (43.33%), Query Frame = 0
Query: 3 KYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFG 62
KY+V EI N E V K+++ LSNKFD + +E LL + E
Sbjct: 569 KYDVEKHEIINS---------EKDKVEKIIKDLSNKFDKELSDCKEESKRQLLTIQEEHS 628
Query: 63 SLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALLTKQYSKVVKKFR 122
SL+ + RE+ + K + KA + +E+ + E I L ++ +K F+
Sbjct: 629 SLI-----LSLREEHESKELNLKAKYDQELRQSQIQAENELKERITALKSEHDAQLKAFK 674
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SVB2 | 1.1e-39 | 65.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7UAM6 | 1.6e-38 | 62.32 | Receptor-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
| A0A5A7UA03 | 4.5e-38 | 62.77 | Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5D3BN48 | 1.3e-37 | 62.77 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371... | [more] |
| A0A5D3BI07 | 2.3e-37 | 64.18 | Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0035182.1 | 3.19e-50 | 65.69 | uncharacterized protein E6C27_scaffold57G002840 [Cucumis melo var. makuwa] | [more] |
| KAA0052278.1 | 7.50e-49 | 62.32 | Receptor-like protein 12 [Cucumis melo var. makuwa] >TYK01844.1 Receptor-like pr... | [more] |
| TYJ98757.1 | 9.17e-48 | 64.18 | gag-proteinase polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0054430.1 | 1.68e-47 | 62.77 | gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK14606.1 gag-proteinase... | [more] |
| KAA0052069.1 | 3.36e-47 | 62.77 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00684.1 gag-pol polyprotein [... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G22260.1 | 7.2e-04 | 26.67 | Myosin heavy chain-related protein | [more] |
