Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACGACGGAGAAAGAAACAGAAGTGGAGACGGAGACAGAAGTGGAGACGGAGACAGAAGTGGAGACGCGAACGGAGGGGAAAAAGAAAACGGGTGGCGGCGGCGTGAAGACGAGGATGAAGAAGGCGAAGAGGAAGATGTCGGCGGGGTGGGGGGGGGGGGGGGCGGACGCGCGCGCGGCTAGGGTTATTTAA
ATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACGACGGAGAAAGAAACAGAAGTGGAGACGGAGACAGAAGTGGAGACGGAGACAGAAGTGGAGACGCGAACGGAGGGGAAAAAGAAAACGGGTGGCGGCGGCGTGAAGACGAGGATGAAGAAGGCGAAGAGGAAGATGTCGGCGGGGTGGGGGGGGGGGGGGGCGGACGCGCGCGCGGCTAGGGTTATTTAA
ATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACGACGGAGAAAGAAACAGAAGTGGAGACGGAGACAGAAGTGGAGACGGAGACAGAAGTGGAGACGCGAACGGAGGGGAAAAAGAAAACGGGTGGCGGCGGCGTGAAGACGAGGATGAAGAAGGCGAAGAGGAAGATGTCGGCGGGGTGGGGGGGGGGGGGGGCGGACGCGCGCGCGGCTAGGGTTATTTAA
MDGLRRTSGGAAKLPTTEKETEVETETEVETETEVETRTEGKKKTGGGGVKTRMKKAKRKMSAGWGGGGADARAARVI
Homology
BLAST of IVF0013080.2 vs. NCBI nr
Match:
MBB5208986.1 (hypothetical protein [Chiayiivirga flava])
HSP 1 Score: 48.1 bits (113), Expect = 8.16e-05
Identity = 35/73 (47.95%), Postives = 40/73 (54.79%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
MBB5208986.1 8.16e-05 47.95 hypothetical protein [Chiayiivirga flava] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
A T G G A T G G G C T G C G A C G A A C G A G C G G T G G A G C T G C G A A G T T G C C G A C G A C G G A G A A A G A A A C A G A A G T G G A G A C G G A G A C A G A A G T G G A G A C G G A G A C A G A A G T G G A G A C G C G A A C G G A G G G G A A A A A G A A A A C G G G T G G C G G C G G C G T G A A G A C G A G G A T G A A G A A G G C G A A G A G G A A G A T G T C G G C G G G G T G G G G G G G G G G G G G G G C G G A C G C G C G C G C G G C T A G G G T T A T T T A A 20 40 60 80 100 120 140 160 180 200 220 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 32..47 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..78
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name Unique Name Type
IVF0013080 IVF0013080 gene
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Type
IVF0013080.2-exon IVF0013080.2-exon-chr10:9817517..9817753 exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
IVF0013080.2-cds IVF0013080.2-cds-chr10:9817517..9817753 CDS
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
IVF0013080.2 IVF0013080.2-protein polypeptide
