Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGGGTCCCAAGGTTTGAGAGTGGACCGGCTTTCTCTCCCCTTCGTGGGACGAAAGGGCGAGGGAGAAAGAGACGATCAAAAACTGGGAAGCGGGAATCGCAGAATTTGGCACACGAAAATGCAGCGCCAAACTTCCCCACTTGCCAACCACAGATCAGTGTCCGTACATCCATCGGGGGCGCTGCACCCGCCCCTCTACTACAAATGA mRNA sequence ATGGTGGGGTCCCAAGGTTTGAGAGTGGACCGGCTTTCTCTCCCCTTCGTGGGACGAAAGGGCGAGGGAGAAAGAGACGATCAAAAACTGGGAAGCGGGAATCGCAGAATTTGGCACACGAAAATGCAGCGCCAAACTTCCCCACTTGCCAACCACAGATCAGTGTCCGTACATCCATCGGGGGCGCTGCACCCGCCCCTCTACTACAAATGA Coding sequence (CDS) ATGGTGGGGTCCCAAGGTTTGAGAGTGGACCGGCTTTCTCTCCCCTTCGTGGGACGAAAGGGCGAGGGAGAAAGAGACGATCAAAAACTGGGAAGCGGGAATCGCAGAATTTGGCACACGAAAATGCAGCGCCAAACTTCCCCACTTGCCAACCACAGATCAGTGTCCGTACATCCATCGGGGGCGCTGCACCCGCCCCTCTACTACAAATGA Protein sequence MVGSQGLRVDRLSLPFVGRKGEGERDDQKLGSGNRRIWHTKMQRQTSPLANHRSVSVHPSGALHPPLYYK
Homology
BLAST of IVF0012044.1 vs. ExPASy TrEMBL
Match: A0A0A0L8H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G599480 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0 Query: 1 MVGSQGLRVDRLSLPFVGRKGEGERDDQKLGSGNRRIWHTKMQRQTSPLANHRSVSVH 59 MVGSQGL VDRL LPFVGRKGEGE DDQKLGSGNRRIWH KM+RQTSPLANHRSVS++ Sbjct: 1 MVGSQGLSVDRLCLPFVGRKGEGEGDDQKLGSGNRRIWHIKMKRQTSPLANHRSVSIY 58
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L8H9 | 2.4e-20 | 87.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G599480 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 38..54 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 18..70 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 18..34 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
IVF0012044 | IVF0012044 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0012044.1-exon | IVF0012044.1-exon-chr06:12112087..12112299 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0012044.1-cds | IVF0012044.1-cds-chr06:12112087..12112299 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
IVF0012044.1 | IVF0012044.1-protein | polypeptide |
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