Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTTCTGCCGCCTTCAGAAAACGTCGAACAATTCATTCCTGTCAAATCTACAGCTGTCTGCATTGCCAACATGCACCGTTGCCGTGGAGATACACGCATCGGTCCTTCCTCCACAGATAGCGTCGACCAACCCATTCGTGCAACCCTTTTCTTCATCCGTGGCCCATATTGCTCCCCACGCCTCGATTTGTGTACTGCCACCTAA mRNA sequence ATGGTTCTGCCGCCTTCAGAAAACGTCGAACAATTCATTCCTGTCAAATCTACAGCTGTCTGCATTGCCAACATGCACCGTTGCCGTGGAGATACACGCATCGGTCCTTCCTCCACAGATAGCGTCGACCAACCCATTCGTGCAACCCTTTTCTTCATCCGTGGCCCATATTGCTCCCCACGCCTCGATTTGTGTACTGCCACCTAA Coding sequence (CDS) ATGGTTCTGCCGCCTTCAGAAAACGTCGAACAATTCATTCCTGTCAAATCTACAGCTGTCTGCATTGCCAACATGCACCGTTGCCGTGGAGATACACGCATCGGTCCTTCCTCCACAGATAGCGTCGACCAACCCATTCGTGCAACCCTTTTCTTCATCCGTGGCCCATATTGCTCCCCACGCCTCGATTTGTGTACTGCCACCTAA Protein sequence MVLPPSENVEQFIPVKSTAVCIANMHRCRGDTRIGPSSTDSVDQPIRATLFFIRGPYCSPRLDLCTAT
Homology
BLAST of IVF0011257.1 vs. NCBI nr
Match: KAA0053444.1 (hypothetical protein E6C27_scaffold428G001180 [Cucumis melo var. makuwa]) HSP 1 Score: 47.8 bits (112), Expect = 3.82e-04 Identity = 29/61 (47.54%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 4 PPSENVEQFIPVKSTAVCIANMHRCRGDTRIG---PSSTDSVDQPIRATLFFIRGPYCSP 61 PPS+NV+Q PV S A+ A H R + PS +++ D P ATLFFIRG CSP Sbjct: 123 PPSDNVDQCNPVNS-AIVRAAKHLPRTTAKATCACPSCSNNADYPFYATLFFIRGLNCSP 182
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0053444.1 | 3.82e-04 | 47.54 | hypothetical protein E6C27_scaffold428G001180 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
IVF0011257 | IVF0011257 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0011257.1-exon | IVF0011257.1-exon-chr05:12305757..12305963 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
IVF0011257.1-cds | IVF0011257.1-cds-chr05:12305757..12305963 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
IVF0011257.1 | IVF0011257.1-protein | polypeptide |
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