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IVF0004991.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGATGGAAACGATATGGAGATCCACACCATGTACAACCATGGGTTTAACATGTCCCAGGATGATTTAAGCACCTCACGACCTGGTTGTGCGTTCAACGATAGGACCGGATCGAGTGGATCAAAGCGAAAGAGGGGAGGGCAGCGGGTGGGGGAGATTGAGCTAATTCATGAGGTGATGGAGTATGTGAATGACCAGCTGAGGGCCATTGTCGAGTGGCCTATTGTCATGCTTCATAATGAGACCATAGTTCGCCAGGAAGTCCTTCGCAAGTTGCGTGCGATGCTCGAACTAAGTAGGTTGGATAGGGCGAGCTGCTCATGGAGCCTCTTTCACAGTTTAGACAACATGTGCAGTTCCTTGAGGATGACTAACGAGGAGAAGATGGAATTCTGCACGATCCTGCTACGAGAAGATTGA ATGCCTGATGGAAACGATATGGAGATCCACACCATGTACAACCATGGGTTTAACATGTCCCAGGATGATTTAAGCACCTCACGACCTGGTTGTGCGTTCAACGATAGGACCGGATCGAGTGGATCAAAGCGAAAGAGGGGAGGGCAGCGGGTGGGGGAGATTGAGCTAATTCATGAGGTGATGGAGTATGTGAATGACCAGCTGAGGGCCATTGTCGAGTGGCCTATTGTCATGCTTCATAATGAGACCATAGTTCGCCAGGAAGTCCTTCGCAAGTTGCGTGCGATGCTCGAACTAAGTAGGTTGGATAGGGCGAGCTGCTCATGGAGCCTCTTTCACAGTTTAGACAACATGTGCAGTTCCTTGAGGATGACTAACGAGGAGAAGATGGAATTCTGCACGATCCTGCTACGAGAAGATTGA ATGCCTGATGGAAACGATATGGAGATCCACACCATGTACAACCATGGGTTTAACATGTCCCAGGATGATTTAAGCACCTCACGACCTGGTTGTGCGTTCAACGATAGGACCGGATCGAGTGGATCAAAGCGAAAGAGGGGAGGGCAGCGGGTGGGGGAGATTGAGCTAATTCATGAGGTGATGGAGTATGTGAATGACCAGCTGAGGGCCATTGTCGAGTGGCCTATTGTCATGCTTCATAATGAGACCATAGTTCGCCAGGAAGTCCTTCGCAAGTTGCGTGCGATGCTCGAACTAAGTAGGTTGGATAGGGCGAGCTGCTCATGGAGCCTCTTTCACAGTTTAGACAACATGTGCAGTTCCTTGAGGATGACTAACGAGGAGAAGATGGAATTCTGCACGATCCTGCTACGAGAAGATTGA MPDGNDMEIHTMYNHGFNMSQDDLSTSRPGCAFNDRTGSSGSKRKRGGQRVGEIELIHEVMEYVNDQLRAIVEWPIVMLHNETIVRQEVLRKLRAMLELSRLDRASCSWSLFHSLDNMCSSLRMTNEEKMEFCTILLRED Homology
BLAST of IVF0004991.1 vs. ExPASy TrEMBL
Match: A0A5A7V3G0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00270 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0004991.1 vs. ExPASy TrEMBL
Match: A0A5D3BQI7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00550 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 0
BLAST of IVF0004991.1 vs. ExPASy TrEMBL
Match: A0A5A7U9D5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00780 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 5.4e-24 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0
BLAST of IVF0004991.1 vs. ExPASy TrEMBL
Match: A0A5A7URM1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00200 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 7.1e-24 Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 0
BLAST of IVF0004991.1 vs. ExPASy TrEMBL
Match: A0A5A7U4I8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001180 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 9.2e-24 Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 0
BLAST of IVF0004991.1 vs. NCBI nr
Match: KAA0060299.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22049.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 278 bits (712), Expect = 2.12e-94 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0004991.1 vs. NCBI nr
Match: KAA0033884.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01268.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 132 bits (333), Expect = 3.40e-34 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 0
BLAST of IVF0004991.1 vs. NCBI nr
Match: XP_031744343.1 (uncharacterized protein LOC116404989 [Cucumis sativus] >XP_031744344.1 uncharacterized protein LOC116404989 [Cucumis sativus]) HSP 1 Score: 123 bits (309), Expect = 1.00e-31 Identity = 67/136 (49.26%), Postives = 95/136 (69.85%), Query Frame = 0
BLAST of IVF0004991.1 vs. NCBI nr
Match: KAA0050806.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK08539.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 120 bits (301), Expect = 3.54e-31 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0
BLAST of IVF0004991.1 vs. NCBI nr
Match: KAA0056139.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 120 bits (300), Expect = 1.27e-30 Identity = 73/144 (50.69%), Postives = 92/144 (63.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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