IVF0004240.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAACAAAAGAATTTTATCAATTCTTCTTCTTTCATGTTTTCTCTTTCTCTTTCTCTCTCCTGGTACTCTTCTCTCTCCTATTTCTTCTGTCATATTGGATTTTTATTATTACATTCATTGCTCTTATCTCTTCTCTGTTCAAACTTTTTTTTTCCTCAAAGGATTTGGAGTAGAAACGATGGGAACTATGGAACAGGCAGCCTCACTTACTCCACATGAAAAGGTGATTATTCAAATTTTGTTGTCCTTCTACTTTCGATTTTGGTTTATTTTAATTCAAAAACTTTCATTTTGGATAATCGTTTTAATTGGTATCTCATTTTTTTACCATGTAAAAATCAAAATGAAGGTTTTGAAAGTAGAAAAATTTAAAATGAAACAGATGATTAAAAGTATACAACGCAAATGAACGTCTGAGATTTTGTATTTTTATGTTTGACAGGAAATAAGTGGAGGAAAATGGAGAGACGTGATGGTTCAATTGCGTGAAGACTATCATGGTCCGGGACCTAATAAACCAAAGGCTAGCTATAATATGGCGGCTCCTTCTGCAACACCTTAA ATGGATAACAAAAGAATTTTATCAATTCTTCTTCTTTCATGTTTTCTCTTTCTCTTTCTCTCTCCTGGATTTGGAGTAGAAACGATGGGAACTATGGAACAGGCAGCCTCACTTACTCCACATGAAAAGGAAATAAGTGGAGGAAAATGGAGAGACGTGATGGTTCAATTGCGTGAAGACTATCATGGTCCGGGACCTAATAAACCAAAGGCTAGCTATAATATGGCGGCTCCTTCTGCAACACCTTAA ATGGATAACAAAAGAATTTTATCAATTCTTCTTCTTTCATGTTTTCTCTTTCTCTTTCTCTCTCCTGGATTTGGAGTAGAAACGATGGGAACTATGGAACAGGCAGCCTCACTTACTCCACATGAAAAGGAAATAAGTGGAGGAAAATGGAGAGACGTGATGGTTCAATTGCGTGAAGACTATCATGGTCCGGGACCTAATAAACCAAAGGCTAGCTATAATATGGCGGCTCCTTCTGCAACACCTTAA MDNKRILSILLLSCFLFLFLSPGFGVETMGTMEQAASLTPHEKEISGGKWRDVMVQLREDYHGPGPNKPKASYNMAAPSATP Homology
BLAST of IVF0004240.1 vs. ExPASy TrEMBL
Match: A0A0A0KU89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636610 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26 Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of IVF0004240.1 vs. ExPASy TrEMBL
Match: A0A5A7TDZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002810 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.6e-23 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of IVF0004240.1 vs. ExPASy TrEMBL
Match: A0A6J1BVK3 (apidaecins type 73-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.1e-04 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of IVF0004240.1 vs. NCBI nr
Match: KGN52469.1 (hypothetical protein Csa_008670 [Cucumis sativus]) HSP 1 Score: 127 bits (319), Expect = 2.62e-36 Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of IVF0004240.1 vs. NCBI nr
Match: XP_031741770.1 (probable calcium-binding protein CML47 [Cucumis sativus]) HSP 1 Score: 128 bits (321), Expect = 6.15e-34 Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 0
BLAST of IVF0004240.1 vs. NCBI nr
Match: KAA0039469.1 (hypothetical protein E6C27_scaffold64G002790 [Cucumis melo var. makuwa] >TYK00659.1 hypothetical protein E5676_scaffold169G002810 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (292), Expect = 1.66e-32 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of IVF0004240.1 vs. NCBI nr
Match: XP_022133550.1 (apidaecins type 73-like isoform X2 [Momordica charantia]) HSP 1 Score: 52.0 bits (123), Expect = 2.05e-05 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of IVF0004240.1 vs. NCBI nr
Match: XP_022133549.1 (apidaecins type 14-like isoform X1 [Momordica charantia]) HSP 1 Score: 50.4 bits (119), Expect = 7.32e-05 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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