HG10020412.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020412.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	selT-like protein
Location	Chr04: 31649829 .. 31652290 (+)
Sequence length	681
RNA-Seq Expression	HG10020412.1
Synteny	HG10020412.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGGTGAATGATTTCGTATTTGATTGGACTGCTCTTGATTTTTGATGTTGTTTTTGTGATATTCAGAAACTTAATTTGTTATTTAGTTTTGGAATACAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGGTAGTTCATCGTTTTGATTATTAATTTTTGTGTTTGTTTGTCTCATTTTGGGCGGGAAGTGAGTCAATCGAACGTTTATGTGATTTTCGTTTCCTGTGTTTTTTATGTTTTCCTCCATTTCTCATCGACTCTGATTGCGCATTAAATTACGGTAAACTTATAGTGAAGGAAAACTTGATTTATTTGCTTTGTTTTGTTTTAATTCAACAAGCACAGGTTTCTTTGATTGACGTTAACTTCCTTGATTGAACGAACATTTCAATATCTCTCTCTCTCTAATGGTTGTTTAGAGTCACTATGATGAAAATTTGGTTGTAGTCGGAATCTTTGCTGCTGTTCTTCCTCCGATTTTGCTGTTTTTGTTTATTGTTCTTGTTTTCCCCACAGCACAGGACTCTTTTGTTATTTTGAACTTCTTTCGGCAATTGAACAAACGTTTCAATTTCTCTGCTCTCTAGTGATTGTTTTTTTTAAGAGCATTACTCTCCAGTGGCTGTTGAGAGTCATTATGATGAACAATCGGTTGTACTTTGGAATTTTGCTTCTTGTTGTTCCTTTTAACTTCCTCGATTGAACAAACTTTTCGATTTCTCTACTGTCTACTGGTTGCTGAGAGTCAATATGATGAAAAATTAGCCGTACTTTGGAATCTTTACTGTTGGCTTTGATTTTTTTAACCTTGATCAGCATAGTTTTCTTTTATTTACGTAACATCCTCGATTGAATTAATATTTCAATTTCTCCACTCTTTCGTGGTTGTTGAGAGTCATTATAAAAAAAACAGGTTGTAGTCTTCTTCACGGTTGCTGTTCCTTGGAGAATGTGCCTTTTCTTGTTAAAGACTTGAGTCTTGAACGAACATAGTTTGCAGACCTCAATTCAGAAAAGTTCAGTAATAATTCCATATGGAGCCAGCTTCTCTATGTTAGGTTATATGATTTGTTGCAAGATATAGAAATGGATGTTTCATTTGACCTCTTCTGCTTGAGAACGTGATAACATGAACTTATTTATAACATGCGTTAGTATTGCCATTGATAAGCAACTTCTGTAGATTATGTTTTGTACGATTAATTTCATTAAGGTTTAGGAACAGGTTGATGTTAGACTCCCCATTGTTTAGCTTTGGGATAAGGAATGATCTGGATACTGGATGATGAAATTTTGTTGCCACTCATAGAGCTTAAGAATTGAGTAGAAGTCTAATTAGGAATCAGGATAGAGTTTACCTCGTATTTTTTTTCCGTAGTTGTTACACATGATAGTATCAGAAAAGACTTCACTCGTAGTGCATATAAGATATGATATCTTCGTGCATAGGTGATCAGAAGGCAAGGAATGAAGGGGATCAATAGATTAAGCCAATGTTCTTCATGGAGCATATATGATATGATATCTTCCCTTAATTGTATCAAATAAACATCTGACTGCCACTAAGTATAACTGTTGGTTATTATGTGAAGTCTAAGTATAATGTTCAGAAGCAGTGGCATGCATTTTATCCATACATTTTTGGGGTTTGGTCTTTAAAATGTAGTTGTACCATCATGTTATCTCAATTTGTGGAAATGTTTGATGTGAAATGATTTTAAACTCTTGTGGCAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTAAGATTCTTTTATATCTTTTTGTTTCCTCCTTTTTTTCTTGGTAAGATCTCTGTTTACTGACTATCCATTTTCTGAAGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG

mRNA sequence

ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG

Coding sequence (CDS)

ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG

Protein sequence

MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKRSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS

Homology

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BLAST of HG10020412.1 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 216/227 (95.15%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPA-SHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPA +HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAVNHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAIAMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+K+SG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKVSGSRFVDNSGGVWS 227

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BLAST of HG10020412.1 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP-ASHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKP A+HPPPRVHYQPKSQPVIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYR TAITMKNMLESSFPGVEVILANYPPP PKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VP VQFGIIG IMAGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 227

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BLAST of HG10020412.1 vs. NCBI nr
Match: XP_008442408.1 (PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precursor [Cucumis melo subsp. melo] >ADN34273.1 selenoprotein t [Cucumis melo subsp. melo] >KAA0044178.1 selT-like protein [Cucumis melo var. makuwa] >TYK24955.1 selT-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 9.6e-118
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP-ASHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRT+IVLLGLPIFLLFTDIVNLFTPPPPKP A+HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIG I+AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

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BLAST of HG10020412.1 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.7 bits (1114), Expect = 9.6e-118
Identity = 210/226 (92.92%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP +HPPPRVHYQPKSQPVIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           S IGGIGQG VININFCVSCS+RGTAI MKNMLESSFPGVEVILANYPPP PKRLLSK+V
Sbjct: 61  SGIGGIGQGSVININFCVSCSFRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+IG I AGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           EVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DN+GGVWS
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNAGGVWS 226

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BLAST of HG10020412.1 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima])

HSP 1 Score: 429.1 bits (1102), Expect = 2.4e-116
Identity = 208/226 (92.04%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP +HPPPRVHYQPKSQPVIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           S IG IGQG VININFCVSCS+RGTAI MKNMLE SFPGVEVILANYPPP PKRLLSK+V
Sbjct: 61  SGIGEIGQGSVININFCVSCSFRGTAINMKNMLELSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+IG I AGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           EVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DN+GGVWS
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNAGGVWS 226

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BLAST of HG10020412.1 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 8.0e-75
Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MD+TQ++LLGLPIFLL +D+ NLFTPPPPK           Q +S P I E  +FP +K 
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKS----------QHQSPPSISETLDFPAQKS 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           +   G+G G  + INFC+SCSY+GTA++MK MLES FPG++V+LANYP P PKR+L+K+V
Sbjct: 61  T---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PV Q G+IG IM GE IFP +G+A PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSGA
Sbjct: 121 PVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGP 216
           FEV CNGE+VFSKLKE RFPGEIELRDLI   ++ P
Sbjct: 181 FEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTKP 203

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BLAST of HG10020412.1 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.3e-20
Identity = 46/142 (32.39%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 72  ININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTI 131
           +  +FCVSC YR        +L   +PG+++   NYPP   + + ++++ +V+  +I  +
Sbjct: 83  VKFSFCVSCGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCV 142

Query: 132 MAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 191
           ++G   FP LG+  P ++  + +NR  +    +LF N I+  LQS+GAFE+Y   E ++S
Sbjct: 143 VSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWS 202

Query: 192 KLKEQRFPGEIELRDLIGKKLS 214
           KL+  R P   EL   I   L+
Sbjct: 203 KLESGRVPSPPELFQAIDSHLA 224

[Close]

BLAST of HG10020412.1 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-16
Identity = 42/141 (29.79%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 72  ININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTI 131
           + I +CVSC Y+          +  +PG+ +   N+ P F K  L++IV V + G+I  +
Sbjct: 72  LTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIV 131

Query: 132 MAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 191
           + G + F  +G   P    +   NRF      ++ GN  +S L S+GAFE++   + ++S
Sbjct: 132 ITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWS 191

Query: 192 KLKEQRFPGEIELRDLIGKKL 213
           K+ ++R P + E  +LI  +L
Sbjct: 192 KISKERVPTQEEFLNLIDLQL 212

[Close]

BLAST of HG10020412.1 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 58  EKRSVIGGIGQGCVININF--CVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRL 117
           EK   +   GQ     + F  C SC YR        +L   +P ++V   NY PP     
Sbjct: 28  EKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGEKYPQIQVNGGNYDPPGLNYY 87

Query: 118 LSKIVPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 177
           LSK++  ++  II ++++    F  LG+  P W+  ++AN+  +    +  GN +++ L 
Sbjct: 88  LSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQANKIYACMMIFFLGNMLEAQLI 147

Query: 178 SSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKL 213
           SSGAFE+  N   V+SKL+  RFP    L  +I   L
Sbjct: 148 SSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDNHL 184

[Close]

BLAST of HG10020412.1 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 38/142 (26.76%), Postives = 69/142 (48.59%), Query Frame = 0


Query: 72  ININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTI 131
           + I +CVSC Y+          +  +P + +  AN+ P   K  +++ +  V+  ++  +
Sbjct: 87  LRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVLV 146

Query: 132 MAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 191
           + G + F R G+  P        N+  S    ++ GN ++  L S+GAFEVY   E ++S
Sbjct: 147 LGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWS 206

Query: 192 KLKEQRFPGEIELRDLIGKKLS 214
           K++  R P   E   LI  +L+
Sbjct: 207 KIESGRVPSPQEFMQLIDAQLA 228

[Close]

BLAST of HG10020412.1 vs. ExPASy TrEMBL
Match: A0A0A0LCS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP-ASHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKP A+HPPPRVHYQPKSQPVIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYR TAITMKNMLESSFPGVEVILANYPPP PKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VP VQFGIIG IMAGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 227

[Close]

BLAST of HG10020412.1 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP-ASHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRT+IVLLGLPIFLLFTDIVNLFTPPPPKP A+HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIG I+AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of HG10020412.1 vs. ExPASy TrEMBL
Match: A0A5D3DMW2 (SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00710 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP-ASHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRT+IVLLGLPIFLLFTDIVNLFTPPPPKP A+HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIG I+AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of HG10020412.1 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118
Identity = 210/226 (92.92%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP +HPPPRVHYQPKSQPVIQEP EFPTEKR
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKR 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           S IGGIGQG VININFCVSCS+RGTAI MKNMLESSFPGVEVILANYPPP PKRLLSK+V
Sbjct: 61  SGIGGIGQGSVININFCVSCSFRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180
           PVVQFG+IG I AGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF
Sbjct: 121 PVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAF 180

Query: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           EVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DN+GGVWS
Sbjct: 181 EVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNAGGVWS 226

[Close]

BLAST of HG10020412.1 vs. ExPASy TrEMBL
Match: A0A1S3B6A1 (selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP-ASHPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRT+IVLLGLPIFLLFTDIVNLFTPPPPKP A+HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIG I+AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of HG10020412.1 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type )

HSP 1 Score: 298.9 bits (764), Expect = 3.4e-81
Identity = 146/226 (64.60%), Postives = 179/226 (79.20%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP---ASHPPPRVHYQPKSQPVIQEPPEFPT 60
           MDR Q++LLGLPIFL  +D+ NLFTPPPPKP     H PP + +Q +   +I E  +FP+
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 61  EKRSVIGG-IGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLL 120
           +K S +GG IG G  + INFCVSCSY+GTA+TMK MLE++FPG++VILANYPPP PKRLL
Sbjct: 61  QKTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLL 120

Query: 121 SKIVPVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 180
           +K+VPVVQ G+IG I+AG+ I P +G+  PP W++SLRANRFGS+ASTWL GNF+QS+LQ
Sbjct: 121 AKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQ 180

Query: 181 SSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNS 222
           SSGAFEV+CNGE VFSKLKE RFPGEIELRDLI K L+ P     S
Sbjct: 181 SSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 226

[Close]

BLAST of HG10020412.1 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type )

HSP 1 Score: 296.6 bits (758), Expect = 1.7e-80
Identity = 143/225 (63.56%), Postives = 176/225 (78.22%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKP---ASHPPPRVHYQPKSQPVIQEPPEFPT 60
           MDR Q++LLGLPIFL  +D+ NLFTPPPPKP     H PP + +Q +   +I E  +FP+
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 61  EKRSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLS 120
           +   + G IG G  + INFCVSCSY+GTA+TMK MLE++FPG++VILANYPPP PKRLL+
Sbjct: 61  QTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLLA 120

Query: 121 KIVPVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQS 180
           K+VPVVQ G+IG I+AG+ I P +G+  PP W++SLRANRFGS+ASTWL GNF+QS+LQS
Sbjct: 121 KVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQS 180

Query: 181 SGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNS 222
           SGAFEV+CNGE VFSKLKE RFPGEIELRDLI K L+ P     S
Sbjct: 181 SGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 225

[Close]

BLAST of HG10020412.1 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor )

HSP 1 Score: 281.6 bits (719), Expect = 5.7e-76
Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MD+TQ++LLGLPIFLL +D+ NLFTPPPPK           Q +S P I E  +FP +K 
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKS----------QHQSPPSISETLDFPAQKS 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           +   G+G G  + INFC+SCSY+GTA++MK MLES FPG++V+LANYP P PKR+L+K+V
Sbjct: 61  T---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PV Q G+IG IM GE IFP +G+A PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSGA
Sbjct: 121 PVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGP 216
           FEV CNGE+VFSKLKE RFPGEIELRDLI   ++ P
Sbjct: 181 FEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTKP 203

The following BLAST results are available for this feature:

BLAST of HG10020412.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903844.1	1.3e-119	95.15	selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Beninca...	[more]
XP_004137713.1	2.5e-118	93.83	selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 ...	[more]
XP_008442408.1	9.6e-118	93.39	PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precurso...	[more]
XP_022935564.1	9.6e-118	92.92	selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurb...	[more]
XP_022983567.1	2.4e-116	92.04	selT-like protein [Cucurbita maxima]	[more]

BLAST of HG10020412.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STZ2	8.0e-75	64.35	SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2	[more]
Q9BN19	4.3e-20	32.39	Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=510...	[more]
Q19892	4.9e-16	29.79	Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis el...	[more]
Q9VMV6	1.2e-14	31.21	Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanoga...	[more]
Q9U3N5	1.3e-13	26.76	Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis el...	[more]

BLAST of HG10020412.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS3	1.2e-118	93.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1	[more]
E5GBE6	4.7e-118	93.39	Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DMW2	4.7e-118	93.39	SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A6J1F5S6	4.7e-118	92.92	selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1	[more]
A0A1S3B6A1	4.7e-118	93.39	selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1	[more]

BLAST of HG10020412.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58640.1	3.4e-81	64.60	Selenoprotein, Rdx type	[more]
AT5G58640.2	1.7e-80	63.56	Selenoprotein, Rdx type	[more]
AT3G47300.1	5.7e-76	64.35	SELT-like protein precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011893	Selenoprotein, Rdx-type	TIGRFAM	TIGR02174	TIGR02174	coord: 72..209 e-value: 1.3E-23 score: 81.1
IPR011893	Selenoprotein, Rdx-type	PFAM	PF10262	Rdx	coord: 72..208 e-value: 1.4E-15 score: 57.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 155..214 e-value: 5.3E-9 score: 37.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	PANTHER	PTHR13544:SF12	SELT-LIKE PROTEIN	coord: 1..220
IPR019389	Selenoprotein T	PANTHER	PTHR13544	SELENOPROTEIN T	coord: 1..220
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 70..213

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10020412	HG10020412	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10020412.1-cds	HG10020412.1-cds-Chr04:31649829..31650002	CDS
HG10020412.1-cds	HG10020412.1-cds-Chr04:31650099..31650172	CDS
HG10020412.1-cds	HG10020412.1-cds-Chr04:31651778..31652093	CDS
HG10020412.1-cds	HG10020412.1-cds-Chr04:31652174..31652290	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10020412.1	HG10020412.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0098869	cellular oxidant detoxification
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0004791	thioredoxin-disulfide reductase activity