
HG10020412 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGGTGAATGATTTCGTATTTGATTGGACTGCTCTTGATTTTTGATGTTGTTTTTGTGATATTCAGAAACTTAATTTGTTATTTAGTTTTGGAATACAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGGTAGTTCATCGTTTTGATTATTAATTTTTGTGTTTGTTTGTCTCATTTTGGGCGGGAAGTGAGTCAATCGAACGTTTATGTGATTTTCGTTTCCTGTGTTTTTTATGTTTTCCTCCATTTCTCATCGACTCTGATTGCGCATTAAATTACGGTAAACTTATAGTGAAGGAAAACTTGATTTATTTGCTTTGTTTTGTTTTAATTCAACAAGCACAGGTTTCTTTGATTGACGTTAACTTCCTTGATTGAACGAACATTTCAATATCTCTCTCTCTCTAATGGTTGTTTAGAGTCACTATGATGAAAATTTGGTTGTAGTCGGAATCTTTGCTGCTGTTCTTCCTCCGATTTTGCTGTTTTTGTTTATTGTTCTTGTTTTCCCCACAGCACAGGACTCTTTTGTTATTTTGAACTTCTTTCGGCAATTGAACAAACGTTTCAATTTCTCTGCTCTCTAGTGATTGTTTTTTTTAAGAGCATTACTCTCCAGTGGCTGTTGAGAGTCATTATGATGAACAATCGGTTGTACTTTGGAATTTTGCTTCTTGTTGTTCCTTTTAACTTCCTCGATTGAACAAACTTTTCGATTTCTCTACTGTCTACTGGTTGCTGAGAGTCAATATGATGAAAAATTAGCCGTACTTTGGAATCTTTACTGTTGGCTTTGATTTTTTTAACCTTGATCAGCATAGTTTTCTTTTATTTACGTAACATCCTCGATTGAATTAATATTTCAATTTCTCCACTCTTTCGTGGTTGTTGAGAGTCATTATAAAAAAAACAGGTTGTAGTCTTCTTCACGGTTGCTGTTCCTTGGAGAATGTGCCTTTTCTTGTTAAAGACTTGAGTCTTGAACGAACATAGTTTGCAGACCTCAATTCAGAAAAGTTCAGTAATAATTCCATATGGAGCCAGCTTCTCTATGTTAGGTTATATGATTTGTTGCAAGATATAGAAATGGATGTTTCATTTGACCTCTTCTGCTTGAGAACGTGATAACATGAACTTATTTATAACATGCGTTAGTATTGCCATTGATAAGCAACTTCTGTAGATTATGTTTTGTACGATTAATTTCATTAAGGTTTAGGAACAGGTTGATGTTAGACTCCCCATTGTTTAGCTTTGGGATAAGGAATGATCTGGATACTGGATGATGAAATTTTGTTGCCACTCATAGAGCTTAAGAATTGAGTAGAAGTCTAATTAGGAATCAGGATAGAGTTTACCTCGTATTTTTTTTCCGTAGTTGTTACACATGATAGTATCAGAAAAGACTTCACTCGTAGTGCATATAAGATATGATATCTTCGTGCATAGGTGATCAGAAGGCAAGGAATGAAGGGGATCAATAGATTAAGCCAATGTTCTTCATGGAGCATATATGATATGATATCTTCCCTTAATTGTATCAAATAAACATCTGACTGCCACTAAGTATAACTGTTGGTTATTATGTGAAGTCTAAGTATAATGTTCAGAAGCAGTGGCATGCATTTTATCCATACATTTTTGGGGTTTGGTCTTTAAAATGTAGTTGTACCATCATGTTATCTCAATTTGTGGAAATGTTTGATGTGAAATGATTTTAAACTCTTGTGGCAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTAAGATTCTTTTATATCTTTTTGTTTCCTCCTTTTTTTCTTGGTAAGATCTCTGTTTACTGACTATCCATTTTCTGAAGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKRSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS Homology
BLAST of HG10020412 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida]) HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119 Identity = 216/227 (95.15%), Postives = 220/227 (96.92%), Query Frame = 0
BLAST of HG10020412 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus]) HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118 Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of HG10020412 vs. NCBI nr
Match: XP_008442408.1 (PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precursor [Cucumis melo subsp. melo] >ADN34273.1 selenoprotein t [Cucumis melo subsp. melo] >KAA0044178.1 selT-like protein [Cucumis melo var. makuwa] >TYK24955.1 selT-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 433.7 bits (1114), Expect = 9.6e-118 Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of HG10020412 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 433.7 bits (1114), Expect = 9.6e-118 Identity = 210/226 (92.92%), Postives = 216/226 (95.58%), Query Frame = 0
BLAST of HG10020412 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima]) HSP 1 Score: 429.1 bits (1102), Expect = 2.4e-116 Identity = 208/226 (92.04%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2) HSP 1 Score: 281.6 bits (719), Expect = 8.0e-75 Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.3e-20 Identity = 46/142 (32.39%), Postives = 79/142 (55.63%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 4.9e-16 Identity = 42/141 (29.79%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14 Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13 Identity = 38/142 (26.76%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy TrEMBL
Match: A0A0A0LCS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118 Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118 Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy TrEMBL
Match: A0A5D3DMW2 (SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00710 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118 Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118 Identity = 210/226 (92.92%), Postives = 216/226 (95.58%), Query Frame = 0
BLAST of HG10020412 vs. ExPASy TrEMBL
Match: A0A1S3B6A1 (selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118 Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of HG10020412 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type ) HSP 1 Score: 298.9 bits (764), Expect = 3.4e-81 Identity = 146/226 (64.60%), Postives = 179/226 (79.20%), Query Frame = 0
BLAST of HG10020412 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type ) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-80 Identity = 143/225 (63.56%), Postives = 176/225 (78.22%), Query Frame = 0
BLAST of HG10020412 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor ) HSP 1 Score: 281.6 bits (719), Expect = 5.7e-76 Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|