HG10019121.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019121.1
TypemRNA
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr04: 17136972 .. 17137187 (-)
Sequence length216
RNA-Seq ExpressionHG10019121.1
SyntenyHG10019121.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGCAGATAAGGCTCTGACGCAGAGGATAAGGTTGCATTTGTCAATCGTCATCTCTGATCAGATAAGTTGTCACTGTTCAGCAGATGAGAGGGCTGGAAATCCTCTTTGTTTCCAGTTGTCAAGATCAGGTTATCCGAGGTTCAAGGGTTTGTCTTTTAGTGTCATGCGTCTGAGGTATGAGTTTCTCGTTCGTCTTCGACGCATGCGTTAA

mRNA sequence

ATGTCAGCAGATAAGGCTCTGACGCAGAGGATAAGGTTGCATTTGTCAATCGTCATCTCTGATCAGATAAGTTGTCACTGTTCAGCAGATGAGAGGGCTGGAAATCCTCTTTGTTTCCAGTTGTCAAGATCAGGTTATCCGAGGTTCAAGGGTTTGTCTTTTAGTGTCATGCGTCTGAGGTATGAGTTTCTCGTTCGTCTTCGACGCATGCGTTAA

Coding sequence (CDS)

ATGTCAGCAGATAAGGCTCTGACGCAGAGGATAAGGTTGCATTTGTCAATCGTCATCTCTGATCAGATAAGTTGTCACTGTTCAGCAGATGAGAGGGCTGGAAATCCTCTTTGTTTCCAGTTGTCAAGATCAGGTTATCCGAGGTTCAAGGGTTTGTCTTTTAGTGTCATGCGTCTGAGGTATGAGTTTCTCGTTCGTCTTCGACGCATGCGTTAA

Protein sequence

MSADKALTQRIRLHLSIVISDQISCHCSADERAGNPLCFQLSRSGYPRFKGLSFSVMRLRYEFLVRLRRMR
Homology
The following BLAST results are available for this feature:
BLAST of HG10019121.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10019121.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10019121.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10019121.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..71

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
HG10019121HG10019121gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
HG10019121.1-cdsHG10019121.1-cds-Chr04:17136972..17137187CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
HG10019121.1HG10019121.1-proteinpolypeptide