HG10018508.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAAGCTTTAGAGCAAGAGGCCTTGTGAAGGCCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGCAGAAAGACAAAGACAAAGCCAACCACGACGATCACGTCCAACGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGGGGAATGATAGCTCCGTCGAACCATCGAGTTGTTCATGATCAATCCATGAATAATGTTCACGAGGCGAACTTTTGGAACCCTTACGGTGTCGGTGTGGATGAACATATCGATCGGAAGGCGGCCATGTACATATCATCGGTGCAAGAACGCTTTAAACTTGAGGGCTTAATCAATTGA ATGGATTCAAGCTTTAGAGCAAGAGGCCTTGTGAAGGCCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGCAGAAAGACAAAGACAAAGCCAACCACGACGATCACGTCCAACGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGGGGAATGATAGCTCCGTCGAACCATCGAGTTGTTCATGATCAATCCATGAATAATGTTCACGAGGCGAACTTTTGGAACCCTTACGGTGTCGGTGTGGATGAACATATCGATCGGAAGGCGGCCATGTACATATCATCGGTGCAAGAACGCTTTAAACTTGAGGGCTTAATCAATTGA ATGGATTCAAGCTTTAGAGCAAGAGGCCTTGTGAAGGCCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGCAGAAAGACAAAGACAAAGCCAACCACGACGATCACGTCCAACGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGGGGAATGATAGCTCCGTCGAACCATCGAGTTGTTCATGATCAATCCATGAATAATGTTCACGAGGCGAACTTTTGGAACCCTTACGGTGTCGGTGTGGATGAACATATCGATCGGAAGGCGGCCATGTACATATCATCGGTGCAAGAACGCTTTAAACTTGAGGGCTTAATCAATTGA MDSSFRARGLVKAMLGPLHGEAMAGSRKTKTKPTTTITSNASSCSSHVSFMVHHQERGMIAPSNHRVVHDQSMNNVHEANFWNPYGVGVDEHIDRKAAMYISSVQERFKLEGLIN Homology
BLAST of HG10018508.1 vs. NCBI nr
Match: KAA0056544.1 (hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa] >TYK02718.1 hypothetical protein E5676_scaffold1154G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39 Identity = 92/116 (79.31%), Postives = 97/116 (83.62%), Query Frame = 0
BLAST of HG10018508.1 vs. NCBI nr
Match: KAE8652260.1 (hypothetical protein Csa_022307 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39 Identity = 87/109 (79.82%), Postives = 95/109 (87.16%), Query Frame = 0
BLAST of HG10018508.1 vs. NCBI nr
Match: KAG6578363.1 (hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.4 bits (363), Expect = 5.9e-31 Identity = 79/117 (67.52%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of HG10018508.1 vs. NCBI nr
Match: KAG6602687.1 (hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.7 bits (335), Expect = 1.0e-27 Identity = 80/116 (68.97%), Postives = 85/116 (73.28%), Query Frame = 0
BLAST of HG10018508.1 vs. NCBI nr
Match: XP_007031912.2 (PREDICTED: uncharacterized protein LOC18601044 [Theobroma cacao]) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-05 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of HG10018508.1 vs. ExPASy TrEMBL
Match: A0A0A0LQT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406070 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42 Identity = 91/115 (79.13%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of HG10018508.1 vs. ExPASy TrEMBL
Match: A0A5A7UMY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00160 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 9.8e-40 Identity = 92/116 (79.31%), Postives = 97/116 (83.62%), Query Frame = 0
BLAST of HG10018508.1 vs. ExPASy TrEMBL
Match: V4TIP5 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017736mg PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05 Identity = 44/122 (36.07%), Postives = 61/122 (50.00%), Query Frame = 0
BLAST of HG10018508.1 vs. ExPASy TrEMBL
Match: A0A2I4E7Q1 (uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05 Identity = 47/125 (37.60%), Postives = 63/125 (50.40%), Query Frame = 0
BLAST of HG10018508.1 vs. ExPASy TrEMBL
Match: A0A2H5Q016 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_183620 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05 Identity = 44/122 (36.07%), Postives = 61/122 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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