HG10008123.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Position :
0
Zoom :
x 1
ATGAATTGTTTGTTACTCGCTATTAATAATCCCATCAAGCTCAATAAATTCAAGCTCAAACTAGTCAAATTCGCCTCAACTGCAATTGCTCAACCAAACCCATGTTCTTTTTCACACAGTGAAGATGAACAAAGTACCACCTCCATCAACACAACTTTGCATGTTCAATGTAACCCATCAAAGGTGGCCCAAATCCTAGAGAGTCTCCGAAGGGAGCCCAACATTGCGTTTTCCTTTTTTCGCGAATTGGAGGAATGGGGCTTTCAACATAACATCTCTACTTATGCAGCTCTTATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTCGAATCTCTGTTCTCGAATCTCATTGCCTCAAAGAGAAGGGAATTTGATGTTTTAGATTTGCTTGAATCACTTAATCAAGGGTATGTGGTGGATGGCTCATTCATTCGAGCCTATGATGCCTTAATCAAGGCTTATGTCAGTGTTAGCTTGTTTGATAGCGTTGTGGATTTACTTTTCCGATTAGAAAGGAAGGGATTTGTTCCACATATTTTCACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAAATGAATATGGCTCTAGTTGTGTACAAGCAGTTGAAGAGGTTTGGTTGCCAACCTAATGATTACACTTATGCTACTGTAATAAAAGCCCTTTGTAAAATAGGTCACATGGAAGAAGCTATAGACATTTTTGAGGAGATGAGTGAATCTGGGGTGGTTCCTAATGCCTTTGCTTGTGCTGCATATATTGAAGGGTTGTGTACCCACGATTGTTCAACTTCAGGGTATCAGTTGCTACAAGCATGGAGAGCAGAACAAGTCCCAATCGACGCGTATGCTTACTCTGTAGTAATTCGTGGATTTTGTGAGGAGATGAAAATAGATGAGGCAGAAAATGTCTTTCTTGATATGGAAAAATATGGAGTAGTTCCAGATGCACTAACTTATGGTGTGTTGATCAATGGTTATTGCAAGAAGTTGATGTTGCAAAAAGCTTTGTCTCTTCACAGTCTCATGTTGTCAAAAGGTGTAAAATCAAATTGTGTGATCATCAGCTCTATCCTTCAATGCTTGTTTAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAATATTTCAGGGTGAGGGATTATTTTTGGACAAGGTTGTATACAATATTGTTGTTCATGCCCTATGTGAACTAGGAAAATTGGAAGAAGCTATTGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTCGTGCATTATACAACAATGATTAAAGGTTTTTTTGTTCAAGGAAAAATTCATGAAGCAATGATAATGTTTGAAAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTTGCTACTGGATTATCTAGAAACGGTCTTGTATCTAAGGTCCATGGCCTTCTAGATTACATGGAGGAACATGGTTTGAAAGAAGACCCTAAGATACGCGACCTGGTAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAATTTTTTAACAGTTTAGAAGTAAAGACGGTAGATAACTATTCTGCCATGATTAATGGGTATTGTGCAGCCAACCATACGAAAGATGCATATGAACTTTTTATTAATTTGTCCAAGAAAGGAGTTTTTATTAAAAGAAGTGCTCTTGTTAGGCTAGTTAGTAGCCTTTGCATGGAAGATTCTAGTGATAGAGATATTAAGGTGATGAAACAACTTCCAATTAGGAATGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCCCTTTGCCGGGAAAGAAATATGAAGAAGGCCCAATGTTTATTTGATTTTTTAGTCAGTTCTGGGTTAACTCCTGATCTCATCACTTACACAATGATGATAAATGGTTATTGCAATATTAATTTCTTGAGAAAAGCTTATGAACTTCTGTGTGATATGAAAAATCGAGGGAGGGAGCCTGATATTTTTATCTATACAATTTTACTTGATGGTCAATTTAAAACCAGAGTACGAGAGCTTTGCTCCTCAGTAGAAATAGCTTTTACTTCAACAATTTTTGATGAAATGAAGGACATGAAGTTCACTCCAGACGTTGTTTACTACACTGTGATGATTGATGGGTATTGTAAAATGAACAAACTTAATGATGCTGTTGTCCTCTTTGAGGAAATGATTGATCAAGGAATAGAGCCTGATACAGTTACTTATACTGCCCTACTGTCCGGCTGTTGTAGAAGTGGAAATACGGAGAAGGCTCAAACCCTATATTATGATATGGTGTCTAAGGGAATTCTCCCTCCTAAACATTTTTCATTTCTGTTGCATCACGATACTCTAAAAACCAAGAAAGTGCAACTTTACAAGCACCTTACTGAATAA20040060080010001200140016001800200022002400Expect = 5.5E-9 / Score = 35.6Expect = 4.4E-5 / Score = 21.4Expect = 2.1E-11 / Score = 41.2Expect = 8.2E-8 / Score = 30.0Expect = 8.1E-6 / Score = 23.7Expect = 2.6E-7 / Score = 28.4Expect = 1.2E-5 / Score = 23.1Expect = 7.4E-4 / Score = 17.5Expect = 0.0014 / Score = 16.6Expect = 1.4E-4 / Score = 19.8Expect = 5.6E-8 / Score = 30.5Expect = 6.7E-10 / Score = 36.5Expect = 3.1E-8 / Score = 31.3Expect = 0.35 / Score = 11.2Expect = 6.2E-4 / Score = 19.8Expect = 2.5E-14 / Score = 53.2Expect = 8.8E-13 / Score = 48.2Expect = 8.9E-14 / Score = 51.4Expect = 2.6E-12 / Score = 46.8Expect = 8.3E-19 / Score = 67.5Score = 9.470621Score = 13.526301Score = 12.068449Score = 11.038087Score = 11.794416Score = 9.865228Score = 11.651919Score = 13.405727Score = 12.189023Score = 13.953793Score = 10.709248Score = 10.336563Expect = 1.8E-24 / Score = 88.3Expect = 6.5E-16 / Score = 60.4Expect = 1.0E-16 / Score = 63.0Expect = 9.7E-11 / Score = 43.5Expect = 1.2E-17 / Score = 66.0Expect = 2.3E-28 / Score = 101.6Expect = 2.3E-24 / Score = 87.7Score = Score = Score = Score = Score = Score = SequencePF12854TIGR00756PF01535PF13041PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10PTHR45613PTHR45613:SF4PTHR45613:SF4PTHR45613
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 386..418
e-value: 5.5E-9
score: 35.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 633..667
e-value: 5.6E-8
score: 30.5
coord: 598..631
e-value: 1.4E-4
score: 19.8
coord: 428..461
e-value: 1.2E-5
score: 23.1
coord: 530..558
e-value: 0.0014
score: 16.6
coord: 392..425
e-value: 2.6E-7
score: 28.4
coord: 182..215
e-value: 4.4E-5
score: 21.4
coord: 462..492
e-value: 7.4E-4
score: 17.5
coord: 713..745
e-value: 6.7E-10
score: 36.5
coord: 323..355
e-value: 8.1E-6
score: 23.7
coord: 287..321
e-value: 8.2E-8
score: 30.0
coord: 746..778
e-value: 3.1E-8
score: 31.3
coord: 217..251
e-value: 2.1E-11
score: 41.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 530..558
e-value: 6.2E-4
score: 19.8
coord: 148..177
e-value: 0.35
score: 11.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 596..644
e-value: 2.6E-12
score: 46.8
coord: 425..472
e-value: 8.9E-14
score: 51.4
coord: 285..333
e-value: 8.8E-13
score: 48.2
coord: 708..757
e-value: 8.3E-19
score: 67.5
coord: 179..228
e-value: 2.5E-14
score: 53.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 526..560
score: 9.470621
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 744..778
score: 13.526301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 631..665
score: 12.068449
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 320..354
score: 11.038087
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 390..424
score: 11.794416
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 180..214
score: 9.865228
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 425..459
score: 11.651919
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 709..743
score: 13.405727
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..319
score: 12.189023
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 215..249
score: 13.953793
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 596..630
score: 10.709248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 460..494
score: 10.336563
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 209..273
e-value: 6.5E-16
score: 60.4
coord: 34..208
e-value: 1.8E-24
score: 88.3
coord: 420..494
e-value: 1.2E-17
score: 66.0
coord: 348..419
e-value: 9.7E-11
score: 43.5
coord: 274..347
e-value: 1.0E-16
score: 63.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 686..788
e-value: 2.3E-28
score: 101.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 560..685
e-value: 2.3E-24
score: 87.7
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 13..680
coord: 725..798
NoneNo IPR availablePANTHERPTHR45613:SF4PPR CONTAINING PLANT-LIKE PROTEINcoord: 684..736
NoneNo IPR availablePANTHERPTHR45613:SF4PPR CONTAINING PLANT-LIKE PROTEINcoord: 13..680
coord: 725..798
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 684..736