Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTCAAGTCACTGAATGCATCCACAATGACGTTAACATTTGTATTCCTTGTCTGCATGGTTATTTTAGCACCATCAACGATGGCTGTAGTGCCATATCCATCAGTGCCACAAAATTTTCCTTTCTCTAGTTGTGTTCCATTTATTTTGGATGCGACATTGTGTGTGGTAGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTCTTGTTGCAAAGCCATTTTGAAGCTTAATGACTGTGCTCCTCAAATTTTCCAAAAGATTCCTCCTGCTGACATGGACGTGATTAAGAAGATTTGTGCTTTATAA
mRNA sequence
ATGGCGGTCAAGTCACTGAATGCATCCACAATGACGTTAACATTTGTATTCCTTGTCTGCATGGTTATTTTAGCACCATCAACGATGGCTGTAGTGCCATATCCATCAGTGCCACAAAATTTTCCTTTCTCTAGTTGTGTTCCATTTATTTTGGATGCGACATTGTGTGTGGTAGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTCTTGTTGCAAAGCCATTTTGAAGCTTAATGACTGTGCTCCTCAAATTTTCCAAAAGATTCCTCCTGCTGACATGGACGTGATTAAGAAGATTTGTGCTTTATAA
Coding sequence (CDS)
ATGGCGGTCAAGTCACTGAATGCATCCACAATGACGTTAACATTTGTATTCCTTGTCTGCATGGTTATTTTAGCACCATCAACGATGGCTGTAGTGCCATATCCATCAGTGCCACAAAATTTTCCTTTCTCTAGTTGTGTTCCATTTATTTTGGATGCGACATTGTGTGTGGTAGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTCTTGTTGCAAAGCCATTTTGAAGCTTAATGACTGTGCTCCTCAAATTTTCCAAAAGATTCCTCCTGCTGACATGGACGTGATTAAGAAGATTTGTGCTTTATAA
Protein sequence
MAVKSLNASTMTLTFVFLVCMVILAPSTMAVVPYPSVPQNFPFSSCVPFILDATLCVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL
Homology
BLAST of HG10008104.1 vs. NCBI nr
Match:
KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])
HSP 1 Score: 154.8 bits (390), Expect = 3.9e-34
Identity = 79/108 (73.15%), Postives = 85/108 (78.70%), Query Frame = 0
Query: 1 MAVKSLNASTMTLTFVFLVCMVILAPS-----TMAVVPYPSVPQNFPFSSCVPFILDATL 60
MA +SLN S M L VFLVC+ ILAPS T A P PSVPQNFPF C PFIL+ATL
Sbjct: 1 MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60
Query: 61 CVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
CV DVIKFPIAPHPSCCKAI KLNDCAP+I+QKIP DMDVIKKIC+L
Sbjct: 61 CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
BLAST of HG10008104.1 vs. NCBI nr
Match:
TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28
Identity = 69/98 (70.41%), Postives = 75/98 (76.53%), Query Frame = 0
Query: 11 MTLTFVFLVCMVILAPS-----TMAVVPYPSVPQNFPFSSCVPFILDATLCVVDVIKFPI 70
M L VFLVC+ ILAPS T A P PSVPQNFPF C PFIL+ATLCV VIKFPI
Sbjct: 1 MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
Query: 71 APHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
APHPSCCKAI KL DCAP I+QKIP +DM+VIKK C+L
Sbjct: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
BLAST of HG10008104.1 vs. NCBI nr
Match:
KAA0050072.1 (hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK10333.1 hypothetical protein E5676_scaffold367G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 126.3 bits (316), Expect = 1.5e-25
Identity = 68/108 (62.96%), Postives = 75/108 (69.44%), Query Frame = 0
Query: 1 MAVKSLNASTMTLTFVFLVCMVILAPSTMA------VVPYPSVPQNFPFSSCVPFILDAT 60
MAVKSL AS + VF+V + ILA S A PS+ QN F SC PFI D T
Sbjct: 1 MAVKSLKASPIKSASVFIVSIAILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVT 60
Query: 61 LCVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICA 103
LC+VDV KFPI+PHP CCKAI KLNDCAP +FQ IPPADMDVIKKICA
Sbjct: 61 LCLVDVFKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKICA 108
BLAST of HG10008104.1 vs. NCBI nr
Match:
KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])
HSP 1 Score: 125.6 bits (314), Expect = 2.6e-25
Identity = 67/107 (62.62%), Postives = 74/107 (69.16%), Query Frame = 0
Query: 4 KSLNASTMTLTFVFLVCMVILAPSTMA-------VVPYPSVPQNFPFSSCVPFILDATLC 63
KSL AS M L VF+V + ILA S A PS+ Q+ F SC PFILDATLC
Sbjct: 1 KSLKASPMKLALVFIVSIAILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLC 60
Query: 64 VVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
+VDV KFPIAPHP CCKAI KLNDCAP +FQ IP ADMDV+K ICAL
Sbjct: 61 LVDVFKFPIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDVVKNICAL 107
BLAST of HG10008104.1 vs. NCBI nr
Match:
TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 124.0 bits (310), Expect = 7.4e-25
Identity = 69/109 (63.30%), Postives = 81/109 (74.31%), Query Frame = 0
Query: 2 AVKSLNASTMTLTFVFLVCMVILAPS----TMAVVPYP---SVPQNFPFSSCVPFILDAT 61
A KS +AST+ L VFLVC+VILAPS TMA P P + Q+ FS+C PFIL+AT
Sbjct: 3 AAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILEAT 62
Query: 62 LCVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
+C+VDVIK P+APHPSCCKAI LNDCAP+I+Q IP MDVIKKIC L
Sbjct: 63 MCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIP--GMDVIKKICGL 109
BLAST of HG10008104.1 vs. ExPASy TrEMBL
Match:
A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)
HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 79/108 (73.15%), Postives = 85/108 (78.70%), Query Frame = 0
Query: 1 MAVKSLNASTMTLTFVFLVCMVILAPS-----TMAVVPYPSVPQNFPFSSCVPFILDATL 60
MA +SLN S M L VFLVC+ ILAPS T A P PSVPQNFPF C PFIL+ATL
Sbjct: 1 MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60
Query: 61 CVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
CV DVIKFPIAPHPSCCKAI KLNDCAP+I+QKIP DMDVIKKIC+L
Sbjct: 61 CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
BLAST of HG10008104.1 vs. ExPASy TrEMBL
Match:
A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 7.0e-29
Identity = 69/98 (70.41%), Postives = 75/98 (76.53%), Query Frame = 0
Query: 11 MTLTFVFLVCMVILAPS-----TMAVVPYPSVPQNFPFSSCVPFILDATLCVVDVIKFPI 70
M L VFLVC+ ILAPS T A P PSVPQNFPF C PFIL+ATLCV VIKFPI
Sbjct: 1 MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
Query: 71 APHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
APHPSCCKAI KL DCAP I+QKIP +DM+VIKK C+L
Sbjct: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
BLAST of HG10008104.1 vs. ExPASy TrEMBL
Match:
A0A5A7U2L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00060 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 7.2e-26
Identity = 68/108 (62.96%), Postives = 75/108 (69.44%), Query Frame = 0
Query: 1 MAVKSLNASTMTLTFVFLVCMVILAPSTMA------VVPYPSVPQNFPFSSCVPFILDAT 60
MAVKSL AS + VF+V + ILA S A PS+ QN F SC PFI D T
Sbjct: 1 MAVKSLKASPIKSASVFIVSIAILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVT 60
Query: 61 LCVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICA 103
LC+VDV KFPI+PHP CCKAI KLNDCAP +FQ IPPADMDVIKKICA
Sbjct: 61 LCLVDVFKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKICA 108
BLAST of HG10008104.1 vs. ExPASy TrEMBL
Match:
A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25
Identity = 69/109 (63.30%), Postives = 81/109 (74.31%), Query Frame = 0
Query: 2 AVKSLNASTMTLTFVFLVCMVILAPS----TMAVVPYP---SVPQNFPFSSCVPFILDAT 61
A KS +AST+ L VFLVC+VILAPS TMA P P + Q+ FS+C PFIL+AT
Sbjct: 3 AAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILEAT 62
Query: 62 LCVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
+C+VDVIK P+APHPSCCKAI LNDCAP+I+Q IP MDVIKKIC L
Sbjct: 63 MCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIP--GMDVIKKICGL 109
BLAST of HG10008104.1 vs. ExPASy TrEMBL
Match:
A0A0A0LTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25
Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 0
Query: 2 AVKSLNASTMTLTFVFLVCMVILAPS----TMAVVPYPSV----PQNFPFSSCVPFILDA 61
A KS +AST+ L VFLVC+VILAPS TMA P P + + FS+C PFIL+A
Sbjct: 3 ATKSTSASTIRLAIVFLVCIVILAPSVTARTMAEAPSPVLVLFDEDDSSFSNCAPFILEA 62
Query: 62 TLCVVDVIKFPIAPHPSCCKAILKLNDCAPQIFQKIPPADMDVIKKICAL 104
T+CVVDVIK P+A HPSCCKAI LNDCAPQI+Q IP DMDVIKKIC L
Sbjct: 63 TMCVVDVIKLPVASHPSCCKAISDLNDCAPQIYQHIP--DMDVIKKICGL 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0050069.1 | 3.9e-34 | 73.15 | hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... | [more] |
| TYK10334.1 | 1.4e-28 | 70.41 | hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa] | [more] |
| KAA0050072.1 | 1.5e-25 | 62.96 | hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK1033... | [more] |
| KAE8653023.1 | 2.6e-25 | 62.62 | hypothetical protein Csa_023561, partial [Cucumis sativus] | [more] |
| TYK10344.1 | 7.4e-25 | 63.30 | hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U9A1 | 1.9e-34 | 73.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CGK9 | 7.0e-29 | 70.41 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U2L3 | 7.2e-26 | 62.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CGL7 | 3.6e-25 | 63.30 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LTD6 | 4.7e-25 | 63.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
