HG10008023.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008023.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Aspartate racemase
Location	Chr10: 18793963 .. 18795220 (-)
Sequence length	1011
RNA-Seq Expression	HG10008023.1
Synteny	HG10008023.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTTGATAGAGGTATGGCTATGCCCTTTTATGGACTGACTTGCCCAGCACCTATTCGACGAAATGCCAACAAGAGCATTACTCACTTTAGAAGGAGTATAAACCCGTACTCATATATACAGATTTCCTCTGTTATTCAAACTGATGCAAATGACAACTTACCAGGATCCAAGAAGATATCAAGTTTAGAAAAATCTCTGTCAAAAACTCGAACTCCTAAACCCCTTCTTTTCCAGCCAAATACTGTGGGTGTCTTAGGTGGAGTGTCGGTTTTTTCTACACTACTTTTCTTGGAAAAGCTCGTCTGGTGGAGCTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGTAGCGATCCAGCATTAGGCAAAGGGATTCCCCCTCTTACTTCATTATGTACGTTCAGCACAAATTCTTCTAAATATTGTCATAGTGATGCTCCAATCATCGAGAATTTGAAGCGAAAAAAGGCGTTTCTCGAGCAGTCCGGAGCTCGGTGTCTAATTACGCCATGCCATCTTACACATAGGTGGCTTGATGACACATCCGAGAGCTGCAAATTAACTTTCCTTCATGTGGGAGATTGTGTTGCTAGGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGGAGGGAGCAGTGTCCGGATTGGGCTGCTTGCAACTGATACAGAAACAGTAACTGGTTTTTACCATGAAAGGCTACAAAATCAGGTTTTTTAATACATTCTCAGTTAATGGTTGATACTCTAATTTATTGGTAAAGAGTGCTGCCCAAGCAATAAGAACAGCCATACATCACATAATCTATGATTCATGCTATATCTGAGCATGCAGCAATGGATAATTTTGCATACCTCATTATTAAAATGGATGTTGTTGAAGTGATTGAGGGGCGTTTTTCTACACTATTTAGTAAATAATTCCAAAACTTTCTTTTGATTTCCTTTTCTTTCTTCAGGGTTTTGATGTTATCTTGCCAGACAAAGCAACCATGGAGCATATTGTAATTCCTGCAGTTGAAGCTTTGAATAAAAGGGACCAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTATTCATATTCTTTTGATAAGGGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTTCTCCTGATGATCCTATTATGAAAAAATGTATTGACCCAATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGAAAATTTACATGAGAAAGCTTAG

mRNA sequence

ATGATGCTTGATAGAGGTATGGCTATGCCCTTTTATGGACTGACTTGCCCAGCACCTATTCGACGAAATGCCAACAAGAGCATTACTCACTTTAGAAGGAGTATAAACCCGTACTCATATATACAGATTTCCTCTGTTATTCAAACTGATGCAAATGACAACTTACCAGGATCCAAGAAGATATCAAGTTTAGAAAAATCTCTGTCAAAAACTCGAACTCCTAAACCCCTTCTTTTCCAGCCAAATACTGTGGGTGTCTTAGGTGGAGTGTCGGTTTTTTCTACACTACTTTTCTTGGAAAAGCTCGTCTGGTGGAGCTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGTAGCGATCCAGCATTAGGCAAAGGGATTCCCCCTCTTACTTCATTATGTACGTTCAGCACAAATTCTTCTAAATATTGTCATAGTGATGCTCCAATCATCGAGAATTTGAAGCGAAAAAAGGCGTTTCTCGAGCAGTCCGGAGCTCGGTGTCTAATTACGCCATGCCATCTTACACATAGGTGGCTTGATGACACATCCGAGAGCTGCAAATTAACTTTCCTTCATGTGGGAGATTGTGTTGCTAGGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGGAGGGAGCAGTGTCCGGATTGGGCTGCTTGCAACTGATACAGAAACAGTAACTGGTTTTTACCATGAAAGGCTACAAAATCAGGGTTTTGATGTTATCTTGCCAGACAAAGCAACCATGGAGCATATTGTAATTCCTGCAGTTGAAGCTTTGAATAAAAGGGACCAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTATTCATATTCTTTTGATAAGGGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTTCTCCTGATGATCCTATTATGAAAAAATGTATTGACCCAATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGAAAATTTACATGAGAAAGCTTAG

Coding sequence (CDS)

ATGATGCTTGATAGAGGTATGGCTATGCCCTTTTATGGACTGACTTGCCCAGCACCTATTCGACGAAATGCCAACAAGAGCATTACTCACTTTAGAAGGAGTATAAACCCGTACTCATATATACAGATTTCCTCTGTTATTCAAACTGATGCAAATGACAACTTACCAGGATCCAAGAAGATATCAAGTTTAGAAAAATCTCTGTCAAAAACTCGAACTCCTAAACCCCTTCTTTTCCAGCCAAATACTGTGGGTGTCTTAGGTGGAGTGTCGGTTTTTTCTACACTACTTTTCTTGGAAAAGCTCGTCTGGTGGAGCTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGTAGCGATCCAGCATTAGGCAAAGGGATTCCCCCTCTTACTTCATTATGTACGTTCAGCACAAATTCTTCTAAATATTGTCATAGTGATGCTCCAATCATCGAGAATTTGAAGCGAAAAAAGGCGTTTCTCGAGCAGTCCGGAGCTCGGTGTCTAATTACGCCATGCCATCTTACACATAGGTGGCTTGATGACACATCCGAGAGCTGCAAATTAACTTTCCTTCATGTGGGAGATTGTGTTGCTAGGGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGGAGGGAGCAGTGTCCGGATTGGGCTGCTTGCAACTGATACAGAAACAGTAACTGGTTTTTACCATGAAAGGCTACAAAATCAGGGTTTTGATGTTATCTTGCCAGACAAAGCAACCATGGAGCATATTGTAATTCCTGCAGTTGAAGCTTTGAATAAAAGGGACCAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTATTCATATTCTTTTGATAAGGGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTTCTCCTGATGATCCTATTATGAAAAAATGTATTGACCCAATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGAAAATTTACATGAGAAAGCTTAG

Protein sequence

MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKKISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSDPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRWLDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQGFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNLLSPDDPIMKKCIDPMDALARAAIKWSRSTENLHEKA

Homology

[Close]

BLAST of HG10008023.1 vs. NCBI nr
Match: XP_038878952.1 (uncharacterized protein LOC120071036 [Benincasa hispida])

HSP 1 Score: 611.7 bits (1576), Expect = 3.8e-171
Identity = 302/335 (90.15%), Postives = 314/335 (93.73%), Query Frame = 0


Query: 2   MLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKKI 61
           MLD GM   FY LTCPAPIRRNAN+ IT FRR INPYS +QISSVIQTDANDNLPGSKKI
Sbjct: 1   MLDGGMTTSFYALTCPAPIRRNANEGITRFRRRINPYSSVQISSVIQTDANDNLPGSKKI 60

Query: 62  SSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 121
           SS  KSLSKTRTPKPLL QP TVGV+GGVSVFSTLLFLEKLVWWS+KDGQESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTPKPLLVQPKTVGVIGGVSVFSTLLFLEKLVWWSMKDGQESIPFVVCSD 120

Query: 122 PALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRWL 181
           PALGKGIPPLTS CTFSTNSS+Y HSD PIIENLKRK+AFLEQSGARCLITPCHLTHRWL
Sbjct: 121 PALGKGIPPLTSSCTFSTNSSQYGHSDDPIIENLKRKRAFLEQSGARCLITPCHLTHRWL 180

Query: 182 DDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQG 241
            DTSESCKL FLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDT TV GFYHERLQNQG
Sbjct: 181 GDTSESCKLPFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTATVAGFYHERLQNQG 240

Query: 242 FDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNLL 301
           FD++LPD+ATMEHIVIPAVEALNKRDQEGARNLLRIA+H+LLIRAVNMVILASDELLNLL
Sbjct: 241 FDILLPDEATMEHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300

Query: 302 SPDDPIMKKCIDPMDALARAAIKWSRSTENLHEKA 337
            PDDPI+KKCIDPMDALARAAIKWSRSTENLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTENLHEKA 335

[Close]

BLAST of HG10008023.1 vs. NCBI nr
Match: XP_008465022.1 (PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo] >KAA0046756.1 Amino-acid racemase isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 580.9 bits (1496), Expect = 7.2e-162
Identity = 290/332 (87.35%), Postives = 308/332 (92.77%), Query Frame = 0


Query: 1   MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKK 60
           MML  GMAM FY   CPAP+RRNAN+ IT FRR IN YS +QISSV+QTDANDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120
           ISSL KSLSKTRTPKPLL QPNTVGV+GGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRW 180
           +PALGKGIPP+TSLCTFST+SS+Y HSDAPIIENL RK+AFLE SGARCLITPCHLTHRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQ 240
           L DTSESCKL FLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQ 240

Query: 241 GFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNL 300
           GFDV+LPD+ATM+HIVIPAVEALNKRDQEGARNLLRIA+H+LLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 301 LSPDDPIMKKCIDPMDALARAAIKWSRSTENL 333
           L PDDPI+KKCIDPMDALARAAIKWSRSTENL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of HG10008023.1 vs. NCBI nr
Match: TYK29691.1 (Amino-acid racemase isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 576.6 bits (1485), Expect = 1.4e-160
Identity = 289/332 (87.05%), Postives = 307/332 (92.47%), Query Frame = 0


Query: 1   MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKK 60
           MML  GMAM FY    PAP+RRNAN+ IT FRR IN YS +QISSV+QTDANDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120
           ISSL KSLSKTRTPKPLL QPNTVGV+GGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRW 180
           +PALGKGIPP+TSLCTFST+SS+Y HSDAPIIENL RK+AFLE SGARCLITPCHLTHRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQ 240
           L DTSESCKL FLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQ 240

Query: 241 GFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNL 300
           GFDV+LPD+ATM+HIVIPAVEALNKRDQEGARNLLRIA+H+LLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 301 LSPDDPIMKKCIDPMDALARAAIKWSRSTENL 333
           L PDDPI+KKCIDPMDALARAAIKWSRSTENL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of HG10008023.1 vs. NCBI nr
Match: XP_023006388.1 (uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima])

HSP 1 Score: 557.8 bits (1436), Expect = 6.6e-155
Identity = 277/335 (82.69%), Postives = 301/335 (89.85%), Query Frame = 0


Query: 2   MLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKKI 61
           MLD GMAMPFY L CPAP+RRNAN+SIT FRR +NPYS +QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 62  SSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 121
           SS  KS+SK R PKPLL QPNTVGV+GGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 122 PALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRWL 181
           PALGKGIPPLTSL TF+ NSS++  +DAPIIE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 182 DDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQG 241
            DT  SCKL FLHVGDCVA ELKEAKLKPLE GSSVRIGLLATD   VTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 242 FDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNLL 301
           F+V+LPD+AT++HI++PAVEALNKRDQEGARNLLRIA+HILLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 302 SPDDPIMKKCIDPMDALARAAIKWSRSTENLHEKA 337
            PDDPI+KKCIDPMDALARAAIKWSRST NLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of HG10008023.1 vs. NCBI nr
Match: XP_023530993.1 (uncharacterized protein LOC111793383 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556.6 bits (1433), Expect = 1.5e-154
Identity = 277/336 (82.44%), Postives = 301/336 (89.58%), Query Frame = 0


Query: 1   MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKK 60
           MMLD GMAMPFY L CPAP+RRNAN+SIT FRR +NPYS +QI SV+QTD NDNLP SKK
Sbjct: 1   MMLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKK 60

Query: 61  ISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120
           IS+  KS+SK R PKPLL QPNTVGV+GGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCS
Sbjct: 61  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 120

Query: 121 DPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRW 180
           DPALGKGIPPLTSL TF  NSS++  +DAPIIE LK+K  FLEQSGARCLITPCHL+HRW
Sbjct: 121 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 180

Query: 181 LDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQ 240
           L DT  SCKL FLHVGDCVA ELKEAKLKPLE GSSVRIGLLATD   VTGFY ERLQNQ
Sbjct: 181 LGDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 240

Query: 241 GFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNL 300
           GF+V+LPD+AT++HI++PAVEALNKRDQEGARNLLRIA+HILLIRAVN+VILASDELLNL
Sbjct: 241 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNL 300

Query: 301 LSPDDPIMKKCIDPMDALARAAIKWSRSTENLHEKA 337
           L PDDPI+KKCIDPMDALARAAIKWSRST NLHEKA
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 334

[Close]

BLAST of HG10008023.1 vs. ExPASy TrEMBL
Match: A0A5A7TXR8 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00390 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.5e-162
Identity = 290/332 (87.35%), Postives = 308/332 (92.77%), Query Frame = 0


Query: 1   MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKK 60
           MML  GMAM FY   CPAP+RRNAN+ IT FRR IN YS +QISSV+QTDANDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120
           ISSL KSLSKTRTPKPLL QPNTVGV+GGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRW 180
           +PALGKGIPP+TSLCTFST+SS+Y HSDAPIIENL RK+AFLE SGARCLITPCHLTHRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQ 240
           L DTSESCKL FLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQ 240

Query: 241 GFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNL 300
           GFDV+LPD+ATM+HIVIPAVEALNKRDQEGARNLLRIA+H+LLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 301 LSPDDPIMKKCIDPMDALARAAIKWSRSTENL 333
           L PDDPI+KKCIDPMDALARAAIKWSRSTENL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of HG10008023.1 vs. ExPASy TrEMBL
Match: A0A1S3CMU2 (uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502741 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.5e-162
Identity = 290/332 (87.35%), Postives = 308/332 (92.77%), Query Frame = 0


Query: 1   MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKK 60
           MML  GMAM FY   CPAP+RRNAN+ IT FRR IN YS +QISSV+QTDANDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120
           ISSL KSLSKTRTPKPLL QPNTVGV+GGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRW 180
           +PALGKGIPP+TSLCTFST+SS+Y HSDAPIIENL RK+AFLE SGARCLITPCHLTHRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQ 240
           L DTSESCKL FLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQ 240

Query: 241 GFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNL 300
           GFDV+LPD+ATM+HIVIPAVEALNKRDQEGARNLLRIA+H+LLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 301 LSPDDPIMKKCIDPMDALARAAIKWSRSTENL 333
           L PDDPI+KKCIDPMDALARAAIKWSRSTENL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of HG10008023.1 vs. ExPASy TrEMBL
Match: A0A5D3E266 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00430 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.6e-161
Identity = 289/332 (87.05%), Postives = 307/332 (92.47%), Query Frame = 0


Query: 1   MMLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKK 60
           MML  GMAM FY    PAP+RRNAN+ IT FRR IN YS +QISSV+QTDANDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 61  ISSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120
           ISSL KSLSKTRTPKPLL QPNTVGV+GGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 121 DPALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRW 180
           +PALGKGIPP+TSLCTFST+SS+Y HSDAPIIENL RK+AFLE SGARCLITPCHLTHRW
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 181 LDDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQ 240
           L DTSESCKL FLHVGDCVARELKEA LKPLEGG +VRIGLLATDT TVTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQ 240

Query: 241 GFDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNL 300
           GFDV+LPD+ATM+HIVIPAVEALNKRDQEGARNLLRIA+H+LLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 301 LSPDDPIMKKCIDPMDALARAAIKWSRSTENL 333
           L PDDPI+KKCIDPMDALARAAIKWSRSTENL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of HG10008023.1 vs. ExPASy TrEMBL
Match: A0A6J1L4S4 (uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499133 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.2e-155
Identity = 277/335 (82.69%), Postives = 301/335 (89.85%), Query Frame = 0


Query: 2   MLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKKI 61
           MLD GMAMPFY L CPAP+RRNAN+SIT FRR +NPYS +QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 62  SSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 121
           SS  KS+SK R PKPLL QPNTVGV+GGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 122 PALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRWL 181
           PALGKGIPPLTSL TF+ NSS++  +DAPIIE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 182 DDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQG 241
            DT  SCKL FLHVGDCVA ELKEAKLKPLE GSSVRIGLLATD   VTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 242 FDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNLL 301
           F+V+LPD+AT++HI++PAVEALNKRDQEGARNLLRIA+HILLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 302 SPDDPIMKKCIDPMDALARAAIKWSRSTENLHEKA 337
            PDDPI+KKCIDPMDALARAAIKWSRST NLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of HG10008023.1 vs. ExPASy TrEMBL
Match: A0A6J1EU92 (uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437803 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 276/335 (82.39%), Postives = 300/335 (89.55%), Query Frame = 0


Query: 2   MLDRGMAMPFYGLTCPAPIRRNANKSITHFRRSINPYSYIQISSVIQTDANDNLPGSKKI 61
           MLD GMAMPFY L CPAP+RRNAN+SIT FRR +NPYS +QI SV+QTD NDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 62  SSLEKSLSKTRTPKPLLFQPNTVGVLGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSD 121
           S+  KS+SK R PKPLL QPNTVGV+GGVSV STLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 122 PALGKGIPPLTSLCTFSTNSSKYCHSDAPIIENLKRKKAFLEQSGARCLITPCHLTHRWL 181
           PALGKGIPPLTSL TF  NSS++  +DAPIIE LK+K  FLEQSGARCLITPCHL+HRWL
Sbjct: 121 PALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 182 DDTSESCKLTFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTETVTGFYHERLQNQG 241
            DT  SCKL FLHVGDCVA ELKEAKLKPLE GSSVRIGLLATD   VTGFY ERLQNQG
Sbjct: 181 SDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 242 FDVILPDKATMEHIVIPAVEALNKRDQEGARNLLRIAIHILLIRAVNMVILASDELLNLL 301
           F+V+LPD+AT++HI++PAVEALNKRDQEGARNLLRIA+HILLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 302 SPDDPIMKKCIDPMDALARAAIKWSRSTENLHEKA 337
            PDDPI+KKCIDPMDALARAAIKWSRST NLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of HG10008023.1 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 289.7 bits (740), Expect = 3.1e-78
Identity = 143/296 (48.31%), Postives = 206/296 (69.59%), Query Frame = 0


Query: 44  SSVIQTDANDNLPGSKKISSLEKSLSKTRTPKP---LLFQPNTVGVLGGVSVFSTLLFLE 103
           S ++  D +++LP  KK   L +    +    P   LL Q NTVG++GGVS  STL F++
Sbjct: 38  SVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVK 97

Query: 104 KLVWWSLKDGQESIPFVVCSDPALGKGIPPLTSLCTFSTNS--SKYCHSDAP------II 163
           KLV WS  DG+ S+PFV+CSDPAL K       L  +  NS  S Y   ++       I+
Sbjct: 98  KLVDWSSNDGKSSLPFVLCSDPALNK------ELLLYEENSYPSLYHREESTPVDPKLIV 157

Query: 164 ENLKRKKAFLEQSGARCLITPCHLTHRWLDDTSESCKLTFLHVGDCVARELKEAKLKPLE 223
           ENL+ K+ +LE+ GA+ ++ PCH+ H W ++  E   +  LH+G+C+A+EL+EAK+KPLE
Sbjct: 158 ENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLE 217

Query: 224 GGSSVRIGLLATDTETVTGFYHERLQNQGFDVILPDKATMEHIVIPAVEALNKRDQEGAR 283
            G+ +R+G++AT      GFY E+LQ+ GF+ +LPDKATMEH VIP++EA+ ++D EGAR
Sbjct: 218 AGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGAR 277

Query: 284 NLLRIAIHILLIRAVNMVILASDELLNLLSPDDPIMKKCIDPMDALARAAIKWSRS 329
           NLLRIA+ +LL++AVN+V+L SDE+ +LL  DDP++KKC+DPMDALAR+AIKW+ +
Sbjct: 278 NLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327

The following BLAST results are available for this feature:

BLAST of HG10008023.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878952.1	3.8e-171	90.15	uncharacterized protein LOC120071036 [Benincasa hispida]	[more]
XP_008465022.1	7.2e-162	87.35	PREDICTED: uncharacterized protein LOC103502741 isoform X1 [Cucumis melo] >KAA00...	[more]
TYK29691.1	1.4e-160	87.05	Amino-acid racemase isoform 2 [Cucumis melo var. makuwa]	[more]
XP_023006388.1	6.6e-155	82.69	uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima]	[more]
XP_023530993.1	1.5e-154	82.44	uncharacterized protein LOC111793383 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10008023.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008023.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXR8	3.5e-162	87.35	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3CMU2	3.5e-162	87.35	uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E266	6.6e-161	87.05	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1L4S4	3.2e-155	82.69	uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EU92	1.6e-154	82.39	uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of HG10008023.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	3.1e-78	48.31	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 87..322 e-value: 3.0E-21 score: 76.2
None	No IPR available	GENE3D	3.40.50.1860		coord: 197..314 e-value: 1.5E-41 score: 144.6
None	No IPR available	GENE3D	3.40.50.1860		coord: 83..320 e-value: 1.5E-41 score: 144.6
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 2..334
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 2..334
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 83..205
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 218..325

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10008023	HG10008023	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10008023.1-cds	HG10008023.1-cds-Chr10:18793963..18794253	CDS
HG10008023.1-cds	HG10008023.1-cds-Chr10:18794501..18795220	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10008023.1	HG10008023.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives