HG10005672.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005672.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Transmembrane protein
Location	Chr07: 4754867 .. 4755256 (-)
Sequence length	390
RNA-Seq Expression	HG10005672.1
Synteny	HG10005672.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATCGTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA

mRNA sequence

ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATCGTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA

Coding sequence (CDS)

ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATCGTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA

Protein sequence

MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI

Homology

[Close]

BLAST of HG10005672.1 vs. NCBI nr
Match: XP_038888316.1 (uncharacterized protein LOC120078163 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           M+ YRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL
Sbjct: 1   MNPYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLIVLVR LSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ
Sbjct: 61  FATPVLLIVLVRVLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 121 SSFRESWSI 129

[Close]

BLAST of HG10005672.1 vs. NCBI nr
Match: XP_022989070.1 (uncharacterized protein LOC111486253 [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           MS+YR+RTTADSILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAEDQINWIL
Sbjct: 1   MSNYRSRTTADSILDSLSLNPLPYPVLLLLAVVFIFLGASWWLSYESAVEAAEDQINWIL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+L RFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ
Sbjct: 61  FATPVLLIILARFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 121 SSFRESWSI 129

[Close]

BLAST of HG10005672.1 vs. NCBI nr
Match: KAA0049726.1 (hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa] >TYK12149.1 hypothetical protein E5676_scaffold106G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61
Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           M+SYR+RTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWIL
Sbjct: 1   MTSYRSRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWIL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+LVRFLSS+DPSFFSSSPWDRRRRTHH+PAEG+SPWGVAA IVLLLVL+QFQ
Sbjct: 61  FATPVLLILLVRFLSSLDPSFFSSSPWDRRRRTHHIPAEGTSPWGVAAFIVLLLVLLQFQ 120

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 121 SSFRESWSI 129

[Close]

BLAST of HG10005672.1 vs. NCBI nr
Match: KGN43227.1 (hypothetical protein Csa_020160 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 3.6e-61
Identity = 119/129 (92.25%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           M+SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWIL
Sbjct: 26  MTSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWIL 85

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+LVRFLSS+DP+FFSSSPWDRRRRTHH+PAEG+SPWGVAA I+LLLVL+QFQ
Sbjct: 86  FATPVLLILLVRFLSSLDPTFFSSSPWDRRRRTHHIPAEGTSPWGVAAFILLLLVLLQFQ 145

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 146 SSFRESWSI 154

[Close]

BLAST of HG10005672.1 vs. NCBI nr
Match: KAG6588994.1 (hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           MS+YR+RTTADSILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAEDQINWIL
Sbjct: 1   MSNYRSRTTADSILDSLSLNPLPYPVLLLLAVVFIFLGASWWLSYESAVEAAEDQINWIL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+L R LSSVDPS+FSSSPWDRRRRTH LPAEGSSPWGVAALIVLLLVLVQFQ
Sbjct: 61  FATPVLLIILARILSSVDPSYFSSSPWDRRRRTHQLPAEGSSPWGVAALIVLLLVLVQFQ 120

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 121 SSFRESWSI 129

[Close]

BLAST of HG10005672.1 vs. ExPASy TrEMBL
Match: A0A6J1JLC4 (uncharacterized protein LOC111486253 OS=Cucurbita maxima OX=3661 GN=LOC111486253 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.9e-62
Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           MS+YR+RTTADSILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAEDQINWIL
Sbjct: 1   MSNYRSRTTADSILDSLSLNPLPYPVLLLLAVVFIFLGASWWLSYESAVEAAEDQINWIL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+L RFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ
Sbjct: 61  FATPVLLIILARFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 121 SSFRESWSI 129

[Close]

BLAST of HG10005672.1 vs. ExPASy TrEMBL
Match: A0A5A7U6E4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00860 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           M+SYR+RTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWIL
Sbjct: 1   MTSYRSRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWIL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+LVRFLSS+DPSFFSSSPWDRRRRTHH+PAEG+SPWGVAA IVLLLVL+QFQ
Sbjct: 61  FATPVLLILLVRFLSSLDPSFFSSSPWDRRRRTHHIPAEGTSPWGVAAFIVLLLVLLQFQ 120

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 121 SSFRESWSI 129

[Close]

BLAST of HG10005672.1 vs. ExPASy TrEMBL
Match: A0A0A0K4L6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009710 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61
Identity = 119/129 (92.25%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           M+SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWIL
Sbjct: 26  MTSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWIL 85

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLI+LVRFLSS+DP+FFSSSPWDRRRRTHH+PAEG+SPWGVAA I+LLLVL+QFQ
Sbjct: 86  FATPVLLILLVRFLSSLDPTFFSSSPWDRRRRTHHIPAEGTSPWGVAAFILLLLVLLQFQ 145

Query: 121 SSFRESWSI 130
           SSFRESWSI
Sbjct: 146 SSFRESWSI 154

[Close]

BLAST of HG10005672.1 vs. ExPASy TrEMBL
Match: A0A6J1C2N0 (uncharacterized protein LOC111007895 OS=Momordica charantia OX=3673 GN=LOC111007895 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54
Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWIL 60
           MS YR R+TADSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+QINW+L
Sbjct: 1   MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLL 60

Query: 61  FATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ 120
           FATPVLLIVLVR LSSVDPSFF+SSPW+RRR TH LP EGSSPWGVAALIVLLLVLVQFQ
Sbjct: 61  FATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIVLLLVLVQFQ 120

Query: 121 SSFRESWSI 130
           S+FRESWSI
Sbjct: 121 SAFRESWSI 128

[Close]

BLAST of HG10005672.1 vs. ExPASy TrEMBL
Match: A0A5N5I8U5 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026703 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.0e-42
Identity = 85/128 (66.41%), Postives = 105/128 (82.03%), Query Frame = 0


Query: 3   SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFA 62
           +Y  R+   S L+  SL+P PYPVLL+LAV+SIFLG SW+ SYESAVE AE Q NW+L  
Sbjct: 2   AYYRRSQTSSFLEGFSLSPLPYPVLLILAVISIFLGISWYSSYESAVEEAEGQFNWVLLL 61

Query: 63  TPVLLIVLVRFLSSVDPSF-FSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQS 122
           TP+ LI++V+ LSS+DP + FS SPWDRRRRTHH+P+EGSSPWGVAA I+LLLVL+Q+QS
Sbjct: 62  TPIFLILIVKGLSSMDPDWLFSMSPWDRRRRTHHIPSEGSSPWGVAAFIILLLVLLQYQS 121

Query: 123 SFRESWSI 130
           SFR+SW I
Sbjct: 122 SFRDSWLI 129

[Close]

BLAST of HG10005672.1 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 6.0e-30
Identity = 75/126 (59.52%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 12  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLV 71
           SILDS SL+P PYPVLL+LAV S+FL +SW+ S E A E+AE+QIN+ L   P+ LIVLV
Sbjct: 9   SILDSFSLSPLPYPVLLILAVASVFLLSSWYFSLEEAAESAEEQINFALLLIPLFLIVLV 68

Query: 72  RFLSSVDP-----SFFSSSPWDRRRRTHHLPAE----GSSPWGVAALIVLLLVLVQFQSS 129
           R+LSS++        FSSS    RR T+  P      GSSPWGVAALIVLLLVL+Q+QSS
Sbjct: 69  RWLSSMENPDALLGMFSSS----RRTTYVSPGAGGDGGSSPWGVAALIVLLLVLLQYQSS 128

[Close]

BLAST of HG10005672.1 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 12  SILDSLSLNPPPYPVLLLLAVVSIF-LGASWWLSYESAVEAAEDQINWILFATPVLLIVL 71
           S LD LSL   P P L  L +V  F L  +W+L++ES +E   D +  +   TP+ L++L
Sbjct: 10  SYLDYLSL---PNPHLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFTPLFLLLL 69

Query: 72  VRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESW 128
           V F S    SF+   PW  +   H     GSSPWGVAA++VL+L +V +QS F+E W
Sbjct: 70  VHFFSG-GLSFY--VPWPEQDSIHR---AGSSPWGVAAVLVLILFMVSYQSDFQERW 117

[Close]

BLAST of HG10005672.1 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11
Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 21  PPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPS 80
           P P  + + + ++ +F+  SW+ SYE  +E    Q    L A+P+LL++ V FLS     
Sbjct: 10  PVPLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQGV 69

Query: 81  FFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESW 128
               +          L   G +PWGVA ++V L  +V +QS F+E W
Sbjct: 70  GGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERW 116

[Close]

BLAST of HG10005672.1 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 17  LSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSS 76
           L+ + PP  +L LLA++S+ L  S +  Y+  VE     +   +   P+L + ++  LS 
Sbjct: 23  LTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSF 82

Query: 77  VDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESW 128
           V    F SS   R  +   L  EG+ PWGV  +++LLL+LV  QS F   W
Sbjct: 83  VHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLW 133

The following BLAST results are available for this feature:

BLAST of HG10005672.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888316.1	3.9e-63	97.67	uncharacterized protein LOC120078163 [Benincasa hispida]	[more]
XP_022989070.1	1.6e-61	95.35	uncharacterized protein LOC111486253 [Cucurbita maxima]	[more]
KAA0049726.1	2.8e-61	93.02	hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa] >TYK12149...	[more]
KGN43227.1	3.6e-61	92.25	hypothetical protein Csa_020160 [Cucumis sativus]	[more]
KAG6588994.1	1.5e-59	93.02	hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10005672.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005672.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLC4	7.9e-62	95.35	uncharacterized protein LOC111486253 OS=Cucurbita maxima OX=3661 GN=LOC111486253...	[more]
A0A5A7U6E4	1.3e-61	93.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K4L6	1.8e-61	92.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009710 PE=4 SV=1	[more]
A0A6J1C2N0	2.7e-54	86.82	uncharacterized protein LOC111007895 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5N5I8U5	9.0e-42	66.41	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]

BLAST of HG10005672.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21180.1	6.0e-30	59.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G19875.1	2.4e-15	41.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT2G31940.1	2.8e-11	31.78	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra...	[more]
AT5G42146.1	3.7e-11	34.23	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 3..128
None	No IPR available	PANTHER	PTHR33306:SF7	EXPRESSED PROTEIN	coord: 3..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10005672	HG10005672	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10005672.1-cds	HG10005672.1-cds-Chr07:4754867..4755256	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10005672.1	HG10005672.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane