
HG10005672 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATCGTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATCGTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATCGTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI Homology
BLAST of HG10005672 vs. NCBI nr
Match: XP_038888316.1 (uncharacterized protein LOC120078163 [Benincasa hispida]) HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10005672 vs. NCBI nr
Match: XP_022989070.1 (uncharacterized protein LOC111486253 [Cucurbita maxima]) HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61 Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of HG10005672 vs. NCBI nr
Match: KAA0049726.1 (hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa] >TYK12149.1 hypothetical protein E5676_scaffold106G00860 [Cucumis melo var. makuwa]) HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61 Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10005672 vs. NCBI nr
Match: KGN43227.1 (hypothetical protein Csa_020160 [Cucumis sativus]) HSP 1 Score: 245.0 bits (624), Expect = 3.6e-61 Identity = 119/129 (92.25%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10005672 vs. NCBI nr
Match: KAG6588994.1 (hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59 Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of HG10005672 vs. ExPASy TrEMBL
Match: A0A6J1JLC4 (uncharacterized protein LOC111486253 OS=Cucurbita maxima OX=3661 GN=LOC111486253 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 7.9e-62 Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of HG10005672 vs. ExPASy TrEMBL
Match: A0A5A7U6E4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00860 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61 Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10005672 vs. ExPASy TrEMBL
Match: A0A0A0K4L6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009710 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61 Identity = 119/129 (92.25%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of HG10005672 vs. ExPASy TrEMBL
Match: A0A6J1C2N0 (uncharacterized protein LOC111007895 OS=Momordica charantia OX=3673 GN=LOC111007895 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54 Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of HG10005672 vs. ExPASy TrEMBL
Match: A0A5N5I8U5 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026703 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 9.0e-42 Identity = 85/128 (66.41%), Postives = 105/128 (82.03%), Query Frame = 0
BLAST of HG10005672 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 127.9 bits (320), Expect = 6.0e-30 Identity = 75/126 (59.52%), Postives = 90/126 (71.43%), Query Frame = 0
BLAST of HG10005672 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of HG10005672 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11 Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 0
BLAST of HG10005672 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11 Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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