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Cucsat.G8166.T14 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAATCATATGCTGAAAGATTGTAATCTTCTTTTATCCTCCTTTAAGTATCAATTATTTATTAACTTATTTTATTATGTCTTTTGGTTGGTTCTCCTTTGTTGTGGCTTCCATTTTTGTGTAATTACTCGCTTGTTTGCACTATTGCCATTAGACAGATGTAATTGGTAGATTTCTACTCACCAAGTGAATGTTTTGCCTCTGCCACCATTAATTACTTAAAGGACTTTAAAAATTGGCCTACTTTAAGTATATTTTATGAATTTTTCCCATTTACTTTGCACTAAAACCATCAAACTTCTATTCCCTTCCTTTCTTTCTACTGTGTTCTTCACTCGATTCTCTCCCTGTCTTTCTTTCAGGCAGCTTCAGAGGCCATCAAGAATCTCTTGTCAGCCATAAACTCTCTACTACTCCAGCAAGTGGAGGAACAAAACCTCCAAAGGAAATACGAAAAGCTGGATAAGAGACTTCAAAAAGAGATGCACTCATTGGCGGAGATGGAAAAGAAACTTGGGGGAAACTCTCTGTCTGAAGTTGGAAATGACAATTTGAACTCCAAGAATCCTCTTATACTAAAGCGTGCAAAAACCGATGCCTTGAAGAAACTTGTTGATACCGAGAAGGCCAAATATCTAAACTCCATCCAGGTTAGCCGAGCCATGACTTCAAACCATCTGAAAACAGGCCTCCCCAATGTCTTTCAGGCACTTATGGGATTTGCTAGTTTATCTGTAAAGGGTATGGAGTCTGTTTGTAGTAATGTTACACCACCCCAGGAATGTTGTGATGATGCAACAGTGAGCTCTACTAATTGAGTTTATTAGCCATTTTGGGATAGTAATGGGCCCATAGAACATGTTATTTTTCTTTTTTATCAACAGAAGTTTACTTGCTCTGCAGAAAATTTCCTATATTTTATTGGATGTCAGTCTAATCACTATACCAATACACGAAGTCCAGATTTCTATCAAGTAATGAAATAATAATATTCTGC ATGCACTCATTGGCGGAGATGGAAAAGAAACTTGGGGGAAACTCTCTGTCTGAAGTTGGAAATGACAATTTGAACTCCAAGAATCCTCTTATACTAAAGCGTGCAAAAACCGATGCCTTGAAGAAACTTGTTGATACCGAGAAGGCCAAATATCTAAACTCCATCCAGGTTAGCCGAGCCATGACTTCAAACCATCTGAAAACAGGCCTCCCCAATGTCTTTCAGGCACTTATGGGATTTGCTAGTTTATCTGTAAAGGGTATGGAGTCTGTTTGTAGTAATGTTACACCACCCCAGGAATGTTGTGATGATGCAACAGTGAGCTCTACTAATTGA MHSLAEMEKKLGGNSLSEVGNDNLNSKNPLILKRAKTDALKKLVDTEKAKYLNSIQVSRAMTSNHLKTGLPNVFQALMGFASLSVKGMESVCSNVTPPQECCDDATVSSTN Homology
BLAST of Cucsat.G8166.T14 vs. ExPASy Swiss-Prot
Match: A0A178VBJ0 (Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=APSR1 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy Swiss-Prot
Match: Q93YU8 (Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.9e-10 Identity = 34/84 (40.48%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy Swiss-Prot
Match: Q9AQW1 (Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL2 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07 Identity = 29/102 (28.43%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. NCBI nr
Match: XP_004135735.1 (protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Cucumis sativus] >KGN65935.1 hypothetical protein Csa_023308 [Cucumis sativus]) HSP 1 Score: 214 bits (544), Expect = 2.02e-63 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. NCBI nr
Match: XP_008444972.1 (PREDICTED: uncharacterized protein LOC103488153 [Cucumis melo] >KAA0054068.1 DUF632 domain-containing protein/DUF630 domain-containing protein [Cucumis melo var. makuwa] >TYJ96855.1 DUF632 domain-containing protein/DUF630 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 199 bits (505), Expect = 9.55e-58 Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. NCBI nr
Match: XP_038894510.1 (protein ROLLING AND ERECT LEAF 2 [Benincasa hispida]) HSP 1 Score: 189 bits (481), Expect = 2.94e-54 Identity = 100/112 (89.29%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. NCBI nr
Match: XP_022139972.1 (uncharacterized protein LOC111010751 [Momordica charantia]) HSP 1 Score: 186 bits (471), Expect = 7.51e-53 Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. NCBI nr
Match: XP_023520076.1 (nitrate regulatory gene2 protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177 bits (448), Expect = 1.42e-49 Identity = 93/111 (83.78%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy TrEMBL
Match: A0A0A0LVJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538820 PE=4 SV=1) HSP 1 Score: 214 bits (544), Expect = 9.79e-64 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy TrEMBL
Match: A0A5D3BEJ0 (DUF632 domain-containing protein/DUF630 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00100 PE=4 SV=1) HSP 1 Score: 199 bits (505), Expect = 4.62e-58 Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy TrEMBL
Match: A0A1S3BCH2 (uncharacterized protein LOC103488153 OS=Cucumis melo OX=3656 GN=LOC103488153 PE=4 SV=1) HSP 1 Score: 199 bits (505), Expect = 4.62e-58 Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy TrEMBL
Match: A0A6J1CFH1 (uncharacterized protein LOC111010751 OS=Momordica charantia OX=3673 GN=LOC111010751 PE=4 SV=1) HSP 1 Score: 186 bits (471), Expect = 3.63e-53 Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0
BLAST of Cucsat.G8166.T14 vs. ExPASy TrEMBL
Match: A0A6J1KL39 (nitrate regulatory gene2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495548 PE=4 SV=1) HSP 1 Score: 173 bits (439), Expect = 1.31e-48 Identity = 92/111 (82.88%), Postives = 99/111 (89.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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