Cucsat.G4275.T18 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4275.T18
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	COBW domain-containing protein 1
Location	ctg1170: 663491 .. 667345 (-)
RNA-Seq Expression	Cucsat.G4275.T18
Synteny	Cucsat.G4275.T18

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAATGAAATTTGTTTCTTATAAAAAAGATGAAAGGTTTGGATGATTTGATTTGATGATTTCTTCTGCTGAGATTGCAATTTGAAACTGTGTGTTTTGTTTGAAATGTTTATGAATGATTCGGATGCCAAATCGATGGTGTAGTTGTCTTTCCGCTTGCTAATTAAAACAAAGTAATAAAGTGTAAGTGAACTTTCTTTTGGGCCTGAATATCGAACTCGATTGGGAAAACACCAGGACGGGCCAAAGAAACAGTTGGTTGGGATGAAATGTTAATTACTAATTCTGAGGAAGTTAATGAGGTTGGACCTTAATTATTGAAAGCCAAGGATTTTTTTTATTAAATACAACTTGCTTTTCATTTTATGGATGGAGTTCAACTCTTTGTTTTTGGTGCTGTTTTTAGGTCAGTTTTTGTTTAATCTCCCAGAAATTTTTTATGAGTGAGTGTCTAGATAGCTTATGCCTACCTTGATTAATTTCAGTCAGAAAGCAGATGTATTGAAGGTCAATTATCAAATTGAAACTACCAAACCCAAATCCACGGCTACGATTTGAAAAATGGAAGATGAAGATCCACCACTCGCTGTTGAGATTGGCGAAACAATTACAGCTGTCCAACAACATGAAGATGATGGTGTTTCTGTTGGCGTTACAGTTATCACTGGATATCTTGGAGCTGGAAAATCCACCGTAACTTACACTCTGAAACTTTTCTCCTTACCCCCTCACTCGATTTCTTTTTGCAACCATCAAATTTGAGCTATAGAATGATATTTCTTGTTTGGTGGAATTCAGTTGGTTAATTACGTATTGAACTCGCAACATGGCAAGAGAATTGCTGTTATACTGAACGAATTTGGGGAGGAAATTGGAATTGAGAGGGCAATGATAAATGAAGGTGACGGTGGGGCGTTGGTTGAGGAATGGGTCGAATTAGCAAATGGATGTATTTGTTGCACTGTTAAGCATAGCCTGGTTCAAGCCTTGGAGCAACTTGTGCAGAGAAAAGAAAGGTATTCTCTTGCTGTTATATTAGATTTCAATGGAGCTTCTGGAAAAATACGTTGATGATTTAGTCCATCTTACATGTCTCTAGGCTCGATCATATTTTGTTGGAAACTACGGGATTAGCCAATCCTGCTCCACTTGCTTCTGTACTTTGGCTGGACGATCAATTGGAATCATCGATCAAGCTTGATTCAATTATTACAGTCAGTTCTTAGTTCTTGTTCCTTCACGGTTTGAGTTAGTTTCCCCAAGTTTACTTTGAAATACGTATTATAGTTTGGAAATGTTTGTGAATTACATGCTATAGTTCTTAAGTTTAAGAATGTGTCATATTTGATGTTTGATTGAAATTAAGATAGCCAATGAAGCTTAAGTTTCCCCTTGTTCTAAGGTTAAATTTATGTGTTGGCTTTCGTTTCTATGTTGTTATTTAATTCGATTTTGTCTGTCCATGTGTGAATGCATGGTGTAGTAAATACTTGAATGCTTCAAACTTTGTTTTAAATTCTTTTTCTAGTGATCTAAAGGTTTCACCCAATAATAACTCCTTATGTTCATTTGGATGAATACATGCAAGTAGGTCGTGGATGCTAAAAATCTTCATTTTCAATTGAATGAGCACCGTAGTTCATCATCCTTTCCGGAAGCATTTCATCAAATTGTGTTTGCGGTAATATTCTTATTCTTAGTTCTTTTATGGTCTCTGCAAGTTTGCAATCTACTATTAATTATGTCAAGCAACTGCTGGGATCTTCATTATTTTTCATTTTTCATTCCATTATTACTTAGTATTTTTGTTTGTTTTATTTCTGTCTCTCTTGCTATATGGTTTGTTTTATTTCTCTCTTTTGCTATATGGTTTGTTTTATTTCTCTCTTTTGCTATATGGTTTTCTCAATAATTGTCCAATGTGCACGCCTAAGAAGTTGTGAATCTGTTATCCATCATAGGATACTATTATTCTTAACAAGGTCGACCTGGTCTCTTCAGATCGTGGTGATGGTGCATTGGAGGACCTGGAGTATGAAATACGTAACATTAATTCTCTTGCCAAAATCATTCACTCTGTTCGGTGTCAAGTAGACCTGTCTCTCATACTAGACTGCAATTCCTATAATGCTGCTGTTAGTCATGAACTTAACTTTAACCCCCCAGCTCATTTTCTATTTTTGTATCTGTCCTCTTTATCTAATACTATTCAGTTTTTCCTCATTTAGAATACAGCTCATTTAGAAGCATTATTGAAAGAAAGTTGTTCTTTATCTACTCAAGATCTTCATGATACTGGTGTTCGAACCTTGTGCATTAGTGAACACGACAAAGTTGACCTTGATAAGGTAGTTTCATGTATTTCCGTTAAAGATTGTGTGGTTCCATTCAACTAGTTTCTAGTGATAGATCATCTATGCTGAATTGTTATGACATCCTGTCGTGAACCTGTAGGATAGGATCCTTCTTATTTTAAATTGCTTAGGCATTTAAGAATTTCACGACCTGGAGTGTAGCTACATCCATGCTGATTTATGTTTTAGCCAAAGATCCATTGAAGTAATAATATTCTGAACTACTAATATATCTTTCCATTGGCTTGCTGATCTATTTAACGAAGTATTTAACTTCCGAAGTGATTATATAAATCACTCATCTTCACTATGAGCATGATGATTGAAGTAGGCACAATTCGTACAAGCAATATAAGTTACTGCCTTGGAAATTCATGATATTTCTCGTTAATCTGCATTTCATATCCGATCTTCGTGATGGTGCTATTCTCATGCCTACCTTATTTTGCAATAGGTTCATTCTTGGCTTGAGGAGATACTTTGGGAGAAAAAAGGTGGCATGGATGTGTATCGTTGCAAAGGAGTTTTAAGCATAAAAAATTCTGATCAGCTACATACTTTGCAGGTAGATTATGTGCTTAATCCTATAGTTTTTGCTGTTGGAAAATCACTCCAAACAGGCTTCTTTTTTAACCATCGTCCTAATTTCCCATCCTTTGTTAATCCGATTTCCATGCATTCCTTTTGGGTTTTGAACCCAAATGAAAAGGTTGAGTTATTGCGATGATACTTCCTAACAAGAACACTCAAGAACAACACAGAAAACTCAAGAAGACTCAAATATAAAAACATATGGAAATATACTGTAATATATATTATAAGAGAAGTAGCAAGATAACCTTGCCTTCCAAGTGGGCTAGTCCAAAGGAAATCTCACAAAATTCCTCACTCTTTGCTCCTTATCTCATTCCCTTTATTTATAAGCCCTAACAATACCAACATTCTACTACTAATCCTACTATATCTCTAACTAGGGAGCTCTTTTTCATGTTAATGACTGATTTTGATTGGTGGCTGACAGGCAGTTCGGGAATTATACGAGATCGTTCCTACACGGCAATGGAACAATGGAGAAAGTCAGACGAACAAGATAGTGTTCATAGGTAAAAGACATACAAAAATATCCACGCCCATGAACTCTTACAATGTGTTTATTGTTGAAACTTACACATTGTCCATAATATGCAGGTCGTAATCTGAACGAGGATGTTCTCAGCAAAACCTTTAGAGAATGTGCTTCTATCTCCTAAATTTTGTTGCTTTACTATTTGTTCGACTACATAGGCAAACAAGGAAGAGCATATGCGTAGGTGAAATGGTTTTGTATGATTTCGAAGTCCTTTTTTTGTATGTTAACTTGGATAAGTGTTTCCTAAATTAACTGTCTTTCGGTCTTGTTAGAGGTGTTCTAGAAAGGTTTTTGATGGAAAGATTTGTGAACGAAGGTACCATTGGATGTTTATTTTTCTAAATGAAAGTTCTTTTGAAAGTTAACATTGC

Coding sequence (CDS)

ATGATAAATGAAGGTGACGGTGGGGCGTTGGTTGAGGAATGGGTCGAATTAGCAAATGGATGTATTTGTTGCACTGTTAAGCATAGCCTGGTTCAAGCCTTGGAGCAACTTGTGCAGAGAAAAGAAAGGCTCGATCATATTTTGTTGGAAACTACGGGATTAGCCAATCCTGCTCCACTTGCTTCTGTACTTTGGCTGGACGATCAATTGGAATCATCGATCAAGCTTGATTCAATTATTACAGTCGTGGATGCTAAAAATCTTCATTTTCAATTGAATGAGCACCGTAGTTCATCATCCTTTCCGGAAGCATTTCATCAAATTGTGTTTGCGGTAATATTCTTATTCTTAGTTCTTTTATGGTCTCTGCAAGTTTGCAATCTACTATTAATTATGTCAAGCAACTGCTGGGATCTTCATTATTTTTCATTTTTCATTCCATTATTACTTAGTATTTTTGTTTGTTTTATTTCTGTCTCTCTTGCTATATGGTTTGTTTTATTTCTCTCTTTTGCTATATGGTTTGTTTTATTTCTCTCTTTTGCTATATGGTTTTCTCAATAA

Protein sequence

MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAVIFLFLVLLWSLQVCNLLLIMSSNCWDLHYFSFFIPLLLSIFVCFISVSLAIWFVLFLSFAIWFVLFLSFAIWFSQ

Homology

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy Swiss-Prot
Match: O74310 (COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC15D4.05 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.0e-24
Identity = 47/88 (53.41%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           ++ +  G  L EEWV L+NGC+CCTVK + ++ALE+++++K R D+I++ETTG+ANP PL
Sbjct: 107 LMEDVGGEELYEEWVALSNGCMCCTVKDNGIKALEKIMRQKGRFDNIVIETTGIANPGPL 166

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNL 89
           A   WLDD L+S +KLD I+TV+D KN+
Sbjct: 167 AQTFWLDDALKSDVKLDGIVTVIDCKNI 194

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy Swiss-Prot
Match: Q9BRT8 (COBW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CBWD1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.9e-23
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 7   GGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWL 66
           GG L EEW+EL NGC+CC+VK S ++A+E L+Q+K + D+ILLETTGLA+P  +AS+ W+
Sbjct: 93  GGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWV 152

Query: 67  DDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 112
           D +L S I LD IIT+VD+K     L E +      EA  Q+  A
Sbjct: 153 DAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALA 197

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy Swiss-Prot
Match: Q8VEH6 (COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.9e-23
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 7   GGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWL 66
           GG L EEW+EL NGC+CC+VK S ++A+E L+Q+K + D+ILLETTGLA+P  +AS+ W+
Sbjct: 91  GGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWV 150

Query: 67  DDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAVIFL 116
           D +L S I LD IITVVD+K     L E +      EA  Q+  A + L
Sbjct: 151 DAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMIL 199

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy Swiss-Prot
Match: Q99MB4 (COBW domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Cbwd1 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-22
Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 7   GGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWL 66
           GG L EEW+EL NGC+CC+VK + ++A+E L+Q+K + D+ILLETTGLA+P  +AS+ W+
Sbjct: 92  GGELYEEWLELRNGCLCCSVKDNGLKAIENLMQKKGKFDYILLETTGLADPGAVASMFWV 151

Query: 67  DDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAVIFL 116
           D +L S I LD IITVVD+K     L E +      EA  Q+  A + L
Sbjct: 152 DAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMIL 200

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy Swiss-Prot
Match: Q5JTY5 (COBW domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CBWD3 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-22
Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 7   GGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWL 66
           GG L EEW+EL NGC+CC+VK + ++A+E L+Q+K + D ILLETTGLA+P  +AS+ W+
Sbjct: 93  GGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDDILLETTGLADPGAVASMFWV 152

Query: 67  DDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAVIFL 116
           D +L S I LD IIT+VD+K     L E +      EA  Q+  A I L
Sbjct: 153 DAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIIL 201

[Close]

BLAST of Cucsat.G4275.T18 vs. NCBI nr
Match: KAE8647248.1 (hypothetical protein Csa_018283 [Cucumis sativus])

HSP 1 Score: 223 bits (569), Expect = 1.13e-68
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 85  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 144

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAV 112
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAV
Sbjct: 145 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFAV 196

[Close]

BLAST of Cucsat.G4275.T18 vs. NCBI nr
Match: XP_031742495.1 (COBW domain-containing protein 1-like [Cucumis sativus] >XP_031742496.1 COBW domain-containing protein 1-like [Cucumis sativus] >KGN47644.1 hypothetical protein Csa_018976 [Cucumis sativus])

HSP 1 Score: 222 bits (566), Expect = 2.93e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 75  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 134

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 135 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 185

[Close]

BLAST of Cucsat.G4275.T18 vs. NCBI nr
Match: XP_031742511.1 (COBW domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 222 bits (566), Expect = 2.93e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 75  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 134

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 135 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 185

[Close]

BLAST of Cucsat.G4275.T18 vs. NCBI nr
Match: XP_016899917.1 (PREDICTED: COBW domain-containing protein 1 isoform X1 [Cucumis melo] >XP_016899918.1 PREDICTED: COBW domain-containing protein 1 isoform X1 [Cucumis melo] >XP_016899919.1 PREDICTED: COBW domain-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 222 bits (566), Expect = 3.02e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 76  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 135

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 136 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 186

[Close]

BLAST of Cucsat.G4275.T18 vs. NCBI nr
Match: KAA0064757.1 (COBW domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (566), Expect = 3.10e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 76  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 135

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 136 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 186

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy TrEMBL
Match: A0A0A0KFM6 (CobW C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366420 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.42e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 75  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 134

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 135 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 185

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy TrEMBL
Match: A0A1S4DVA6 (COBW domain-containing protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488574 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.46e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 76  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 135

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 136 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 186

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy TrEMBL
Match: A0A5A7VCN1 (COBW domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00610 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.50e-68
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 76  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 135

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA
Sbjct: 136 ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 186

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy TrEMBL
Match: A0A6J1HE98 (COBW domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462688 PE=3 SV=1)

HSP 1 Score: 218 bits (555), Expect = 6.44e-67
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 76  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 135

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESS+KLDSIITVVDAKNLHFQLNEHRSSSSFPEAF+QI FA
Sbjct: 136 ASVLWLDDQLESSVKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFYQIAFA 186

[Close]

BLAST of Cucsat.G4275.T18 vs. ExPASy TrEMBL
Match: A0A6J1K8W5 (COBW domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492164 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 1.82e-66
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL
Sbjct: 76  MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 135

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 111
           ASVLWLDDQLESS+KLDSIITVVDA+NLHFQLNEHRSSSSFPEAF+QI FA
Sbjct: 136 ASVLWLDDQLESSVKLDSIITVVDARNLHFQLNEHRSSSSFPEAFYQIAFA 186

[Close]

BLAST of Cucsat.G4275.T18 vs. TAIR 10
Match: AT1G26520.1 (Cobalamin biosynthesis CobW-like protein )

HSP 1 Score: 201.4 bits (511), Expect = 6.2e-52
Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPL 60
           MINEG+ GA+VEEWVELANGC+CCTVKHSLVQALEQLVQRK+RLDHILLETTGLANPAPL
Sbjct: 88  MINEGEEGAIVEEWVELANGCVCCTVKHSLVQALEQLVQRKDRLDHILLETTGLANPAPL 147

Query: 61  ASVLWLDDQLESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 112
           AS+LWLDDQLES +KLD I+TVVDAKNL FQLNE R SSSFPEAF+QI FA
Sbjct: 148 ASILWLDDQLESEVKLDCIVTVVDAKNLRFQLNERRDSSSFPEAFNQIAFA 198

[Close]

BLAST of Cucsat.G4275.T18 vs. TAIR 10
Match: AT1G15730.1 (Cobalamin biosynthesis CobW-like protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-20
Identity = 44/101 (43.56%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 12  EEWVELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLDDQL 71
           E+ + L NGC+CCTV+  LV+ + ++VQ +K R DHI++ETTGLANPAP+    + +D++
Sbjct: 146 EDIMMLNNGCLCCTVRGDLVRMISEMVQTKKGRFDHIVIETTGLANPAPIIQTFYAEDEI 205

Query: 72  ESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 112
            + +KLD ++T+VDAK+    L+E +      EA  QI +A
Sbjct: 206 FNDVKLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYA 246

[Close]

BLAST of Cucsat.G4275.T18 vs. TAIR 10
Match: AT1G80480.1 (plastid transcriptionally active 17 )

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-19
Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 12  EEWVELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLDDQL 71
           E+ V L NGC+CCTV+  LV+ + +LV  +K + DHI++ETTGLANPAP+    + ++++
Sbjct: 143 EDIVMLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAEEEI 202

Query: 72  ESSIKLDSIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFA 112
            + +KLD ++T+VDAK+    L+E +      EA  QI +A
Sbjct: 203 FNDVKLDGVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYA 243

The following BLAST results are available for this feature:

BLAST of Cucsat.G4275.T18 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74310	7.0e-24	53.41	COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe (strain 972...	[more]
Q9BRT8	5.9e-23	50.48	COBW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CBWD1 PE=1 SV=1	[more]
Q8VEH6	5.9e-23	50.46	COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 PE=1 SV=1	[more]
Q99MB4	1.3e-22	49.54	COBW domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Cbwd1 PE=2 SV=...	[more]
Q5JTY5	1.3e-22	49.54	COBW domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CBWD3 PE=1 SV=1	[more]

BLAST of Cucsat.G4275.T18 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647248.1	1.13e-68	100.00	hypothetical protein Csa_018283 [Cucumis sativus]	[more]
XP_031742495.1	2.93e-68	100.00	COBW domain-containing protein 1-like [Cucumis sativus] >XP_031742496.1 COBW dom...	[more]
XP_031742511.1	2.93e-68	100.00	COBW domain-containing protein 1 [Cucumis sativus]	[more]
XP_016899917.1	3.02e-68	100.00	PREDICTED: COBW domain-containing protein 1 isoform X1 [Cucumis melo] >XP_016899...	[more]
KAA0064757.1	3.10e-68	100.00	COBW domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G4275.T18 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFM6	1.42e-68	100.00	CobW C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G36...	[more]
A0A1S4DVA6	1.46e-68	100.00	COBW domain-containing protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A5A7VCN1	1.50e-68	100.00	COBW domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1HE98	6.44e-67	97.30	COBW domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462688 P...	[more]
A0A6J1K8W5	1.82e-66	96.40	COBW domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492164 PE=...	[more]

BLAST of Cucsat.G4275.T18 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26520.1	6.2e-52	86.49	Cobalamin biosynthesis CobW-like protein	[more]
AT1G15730.1	2.8e-20	43.56	Cobalamin biosynthesis CobW-like protein	[more]
AT1G80480.1	3.1e-19	42.57	plastid transcriptionally active 17	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..117 e-value: 3.1E-30 score: 107.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..97
IPR003495	CobW/HypB/UreG, nucleotide-binding domain	PFAM	PF02492	cobW	coord: 12..114 e-value: 6.9E-26 score: 90.9
None	No IPR available	PANTHER	PTHR13748:SF31	COBW DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 1..113
None	No IPR available	PANTHER	PTHR13748	COBW-RELATED	coord: 1..113

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4275	Cucsat.G4275	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4275.T18.E1	Cucsat.G4275.T18.E1	exon
Cucsat.G4275.T18.E2	Cucsat.G4275.T18.E2	exon
Cucsat.G4275.T18.E3	Cucsat.G4275.T18.E3	exon
Cucsat.G4275.T18.E4	Cucsat.G4275.T18.E4	exon
Cucsat.G4275.T18.E5	Cucsat.G4275.T18.E5	exon
Cucsat.G4275.T18.E6	Cucsat.G4275.T18.E6	exon
Cucsat.G4275.T18.E7	Cucsat.G4275.T18.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4275.T18.C3	Cucsat.G4275.T18.C3	CDS
Cucsat.G4275.T18.C2	Cucsat.G4275.T18.C2	CDS
Cucsat.G4275.T18.C1	Cucsat.G4275.T18.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4275.T18	Cucsat.G4275.T18-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm