Cucsat.G1866.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G1866.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Glycerophosphodiester phosphodiesterase
Location	ctg1002: 3453962 .. 3455047 (-)
RNA-Seq Expression	Cucsat.G1866.T4
Synteny	Cucsat.G1866.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCCTTGAGAGTTTTTTGTTCTAAAAACTTGACAGGGAATGCTCTTTCTGAGTTCCTTCTCTCTTTGTCTGATCTCTCCCTCTTCCATTTTCTTTTCGTTTTCTCCTCATTTTCATTTTTCCATGTCTTCAACTTGAATTTTTTTTTTCTTTTTTTCTTTTTTCTTTTCTTTTTTTGTTCAATTTTGGTATTTGAAATCAGTTTTGTAGTAATCAAGAGATCAAAGGTAAACAAAACAAACCCATTAATTTATTTTTGTTTTTTTTTCATAAATTTCTTTCCTTTGAGTGATTGTTGTTTTGTGATTTTGCAGTTAAAACAGCGTTGGGACTCACAATGCTAAAGTGTTTTTTGGTCATAGCTTCGTTGATCTTCATCTCCTCCACATTTGCACAACACAATCTCCGTCCTAAAGAAAAATGGCTCACTTTGAAAGGTGATCCCTTTTATGAATTTTTGTTTAAGATTAGGAAATCAATACGAAAAAACCAAAAGAAAAATGATTGAATGAGACGGCCACTGACATGACAAATAAAATTTGAATGCAGGGGATCATCCACTCGTAATAGCAAGAGGAGGATTATCTGGAGTGTTTCCAGAAGCAAGCCCTTTTGCAAATCAAATGGCTGTGGTTACAGGTTTACATAACACAGCTTTGTATTGTAATCTTCAACTCACCAAAGATGGGATTGGCTTTTGCTTAACTGATCTTAGGCTTCAAAATTCAACCAATATTGAAGATGCCTTTCCTCGTGATCGCAAGTCTTATACTGTCAATGGAAAGATTCTCAAGGGATGGTTCTCTGTTGATATCATGTCCAATGATCTCTTTGACAGAGTCAACTGTATGTTCAACTTCCTTCATTTCATTGCCTTTTCATATTCAGCATTTTGCCCATTTCTTTTAACTTGTTGGAATTGGATTTTCATCATCAGTGATTCAAAGTGTCCTCTCTCGACCTAGTCTCTACGACGGTACTTTGCCAATCGCGGCTGTTGAAGATGTCTTTAAAATGAATCCGAGTCAATTCTGGTTGAATGCCGAGGTATTTATAACTACCCTCTTCTGAAAGACTATCTTTCG

Coding sequence (CDS)

ATGCTAAAGTGTTTTTTGGTCATAGCTTCGTTGATCTTCATCTCCTCCACATTTGCACAACACAATCTCCGTCCTAAAGAAAAATGGCTCACTTTGAAAGGGGATCATCCACTCGTAATAGCAAGAGGAGGATTATCTGGAGTGTTTCCAGAAGCAAGCCCTTTTGCAAATCAAATGGCTGTGGTTACAGGTTTACATAACACAGCTTTGTATTGTAATCTTCAACTCACCAAAGATGGGATTGGCTTTTGCTTAACTGATCTTAGGCTTCAAAATTCAACCAATATTGAAGATGCCTTTCCTCGTGATCGCAAGTCTTATACTGTCAATGGAAAGATTCTCAAGGGATGGTTCTCTGTTGATATCATGTCCAATGATCTCTTTGACAGAGTCAACTTGATTCAAAGTGTCCTCTCTCGACCTAGTCTCTACGACGGTACTTTGCCAATCGCGGCTGTTGAAGATGTCTTTAAAATGAATCCGAGTCAATTCTGGTTGAATGCCGAGGTATTTATAACTACCCTCTTCTGA

Protein sequence

MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMAVVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSVDIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAEVFITTLF

Homology

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BLAST of Cucsat.G1866.T4 vs. ExPASy Swiss-Prot
Match: Q9FGT9 (Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 GN=GDPDL6 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42
Identity = 79/170 (46.47%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 5   FLVIASLIFISS-----TFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQM 64
           F ++ SL   SS     T A     P +KWLTL G  P V+ARGG SG+FPE+S  AN +
Sbjct: 4   FFILFSLFLHSSVAAPKTPAAAAAVPAKKWLTLNGQEPAVVARGGFSGLFPESSISANDL 63

Query: 65  AVVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFS 124
           A+ T      + CNLQ+TKDG+G CL+D+RL N+T I   FP+ +K+Y VNG+ LKGWF 
Sbjct: 64  AIGTSSPGFTMLCNLQMTKDGVGLCLSDIRLDNATTISSVFPKAQKTYKVNGQDLKGWFV 123

Query: 125 VDIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 170
           +D  ++ +F++V L+Q++ SRPS++DG + ++AVEDV    P +FWL+ +
Sbjct: 124 IDYDADTIFNKVTLVQNIFSRPSIFDGQMSVSAVEDVLGTKPPKFWLSVQ 173

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BLAST of Cucsat.G1866.T4 vs. ExPASy Swiss-Prot
Match: Q9LVN0 (Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-41
Identity = 71/145 (48.97%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 25  PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMAVVTGLHNTALYCNLQLTKDGIGFC 84
           P +KWLTL G  P V+ARGG SG+FPE+S  AN +A+ T      + CNLQ+TKDG+G C
Sbjct: 29  PAKKWLTLNGQEPAVVARGGFSGLFPESSASANDLAIGTSSPGLTMLCNLQMTKDGVGLC 88

Query: 85  LTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSVDIMSNDLFDRVNLIQSVLSRPSLY 144
           L+D+ L N+T I   FP+ +K+Y VNG+ LKGWF +D  ++ +F+ V L+Q++ SRPS++
Sbjct: 89  LSDIILDNATTISSVFPKAQKTYKVNGQDLKGWFVLDYDADTIFNNVTLVQNIFSRPSIF 148

Query: 145 DGTLPIAAVEDVFKMNPSQFWLNAE 170
           DG + ++AVEDV    P +FWL+ +
Sbjct: 149 DGQMSVSAVEDVLGTKPPKFWLSVQ 173

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BLAST of Cucsat.G1866.T4 vs. ExPASy Swiss-Prot
Match: Q9SZ11 (Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-34
Identity = 75/171 (43.86%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           +L C +++  L  +++     + +PK  W TL GD PLVIARGG SG+FP++S  A   A
Sbjct: 10  LLLCGVILIQL--LAAQIHAQSKKPKSPWPTLTGDPPLVIARGGFSGLFPDSSYDAYNFA 69

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           ++T + +  L+C++QLTKD +G C  DL ++NS++IE  +P  +KSY VNG    GWF++
Sbjct: 70  ILTSVPDAVLWCDVQLTKDALGICFPDLTMRNSSSIEAVYPTRQKSYPVNGVPTSGWFTI 129

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDG-TLPIAAVEDV-FKMNPSQFWLNAE 170
           D    DL D VNLI+ +LSR   +DG + PI  V+ V  +M PS FWLN +
Sbjct: 130 DFSLKDLKD-VNLIRGILSRSEKFDGNSNPIMTVQSVSTQMKPSFFWLNVQ 177

[Close]

BLAST of Cucsat.G1866.T4 vs. ExPASy Swiss-Prot
Match: Q7Y208 (Glycerophosphodiester phosphodiesterase GDPDL1 OS=Arabidopsis thaliana OX=3702 GN=GDPDL1 PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 9.4e-31
Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           +L C +V+  L F +   AQ   R   +W TL GD PLVIARGG SG++P++S  A Q+A
Sbjct: 18  LLFCGVVLIHL-FAAQIDAQ---RSTSRWQTLNGDAPLVIARGGFSGLYPDSSIAAYQLA 77

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
            +T + +  L+C+LQLTKDG+G C  DL L N++ I+  +P   KSY+VNG   KGWF  
Sbjct: 78  TLTSVADVVLWCDLQLTKDGLGICFPDLNLANASTIDRVYPNREKSYSVNGVTTKGWFPN 137

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGT-LPIAAVEDVF-KMNPSQFWLNAE 170
           D    +L     LI+ +LSR   +DG    I+ +EDV   +N   FWLN +
Sbjct: 138 DFSLTEL-QNFLLIRGILSRTDRFDGNGYLISTIEDVVTTLNREGFWLNVQ 183

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BLAST of Cucsat.G1866.T4 vs. ExPASy Swiss-Prot
Match: D7SFH9 (Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.6 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.4e-31
Identity = 74/171 (43.27%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 2   LKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMAV 61
           L C +V+  L F +   AQ +  P   W TL GD PLVIARGG SG+FP++S  A Q A+
Sbjct: 20  LLCGVVLLQL-FAAQVDAQRSTSP---WQTLSGDAPLVIARGGFSGLFPDSSLAAYQFAM 79

Query: 62  VTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSVD 121
           V  + +  L+C++QLTKDG G C  DL L N++N E+ +P  +KSY VNG   KGWF +D
Sbjct: 80  VVSVADVVLWCDVQLTKDGHGICFPDLNLANASNSEEVYPNRQKSYPVNGVTTKGWFPID 139

Query: 122 IMSNDLFDRV-NLIQSVLSRPSLYD-GTLPIAAVEDV-FKMNPSQFWLNAE 170
               +L   + +LI+ +LSR   +D     I+ V++V  +M P+ FWLN +
Sbjct: 140 FSLTELQKVLFSLIRGILSRSGKFDENGYSISTVQNVATQMKPALFWLNVQ 186

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BLAST of Cucsat.G1866.T4 vs. NCBI nr
Match: XP_004143578.1 (glycerophosphodiester phosphodiesterase GDPDL6 [Cucumis sativus] >KGN48806.1 hypothetical protein Csa_002809 [Cucumis sativus])

HSP 1 Score: 345 bits (886), Expect = 5.36e-112
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYT+NGKILKGWFSV
Sbjct: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTINGKILKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE
Sbjct: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. NCBI nr
Match: TYK12644.1 (glycerophosphodiester phosphodiesterase GDPDL6-like [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (808), Expect = 1.60e-100
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNL PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 1   MLKCFLVIASLIFISSTFAQHNLPPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           V+TGL NTALYCNLQLTKDGIGFCLTDLRLQNSTNIED FP  RKSY VNGKILKGWFSV
Sbjct: 61  VITGLQNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDTFPHGRKSYNVNGKILKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DI S+DLF+RVNLIQSVLSRPSLYDGTLPIAAVEDV  + P+QFWLNAE
Sbjct: 121 DITSSDLFNRVNLIQSVLSRPSLYDGTLPIAAVEDVLGIKPNQFWLNAE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. NCBI nr
Match: XP_008440682.1 (PREDICTED: glycerophosphodiester phosphodiesterase GDPDL6-like [Cucumis melo])

HSP 1 Score: 315 bits (808), Expect = 2.20e-100
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNL PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 1   MLKCFLVIASLIFISSTFAQHNLPPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           V+TGL NTALYCNLQLTKDGIGFCLTDLRLQNSTNIED FP  RKSY VNGKILKGWFSV
Sbjct: 61  VITGLQNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDTFPHGRKSYNVNGKILKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DI S+DLF+RVNLIQSVLSRPSLYDGTLPIAAVEDV  + P+QFWLNAE
Sbjct: 121 DITSSDLFNRVNLIQSVLSRPSLYDGTLPIAAVEDVLGIKPNQFWLNAE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. NCBI nr
Match: KAA0036250.1 (glycerophosphodiester phosphodiesterase GDPDL6-like [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (808), Expect = 2.99e-100
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNL PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 15  MLKCFLVIASLIFISSTFAQHNLPPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 74

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           V+TGL NTALYCNLQLTKDGIGFCLTDLRLQNSTNIED FP  RKSY VNGKILKGWFSV
Sbjct: 75  VITGLQNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDTFPHGRKSYNVNGKILKGWFSV 134

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DI S+DLF+RVNLIQSVLSRPSLYDGTLPIAAVEDV  + P+QFWLNAE
Sbjct: 135 DITSSDLFNRVNLIQSVLSRPSLYDGTLPIAAVEDVLGIKPNQFWLNAE 183

[Close]

BLAST of Cucsat.G1866.T4 vs. NCBI nr
Match: XP_038881366.1 (glycerophosphodiester phosphodiesterase GDPDL6-like [Benincasa hispida])

HSP 1 Score: 278 bits (712), Expect = 3.58e-86
Identity = 138/169 (81.66%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLK FLVIASLIF SSTFAQH+L PKE+WLTLKG+ PLVIARGGLSGVFPE+SPFANQMA
Sbjct: 1   MLKWFLVIASLIF-SSTFAQHSLPPKEQWLTLKGEPPLVIARGGLSGVFPESSPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           +V GL NTALYCNLQLTKDG+G CLTDLRLQNSTNIED FPR  KSY VNGK +KGWFSV
Sbjct: 61  LVAGLRNTALYCNLQLTKDGVGICLTDLRLQNSTNIEDVFPRQHKSYIVNGKKIKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           D +S DLF+RV +IQS LSRPSLYDGTLPIA VEDV  + PSQFWLNAE
Sbjct: 121 DYLSKDLFNRVYMIQSSLSRPSLYDGTLPIAGVEDVIGIKPSQFWLNAE 168

[Close]

BLAST of Cucsat.G1866.T4 vs. ExPASy TrEMBL
Match: A0A0A0KM34 (Glycerophosphodiester phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_6G501950 PE=4 SV=1)

HSP 1 Score: 345 bits (886), Expect = 2.59e-112
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYT+NGKILKGWFSV
Sbjct: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTINGKILKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE
Sbjct: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. ExPASy TrEMBL
Match: A0A5D3CNJ3 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002320 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 7.76e-101
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNL PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 1   MLKCFLVIASLIFISSTFAQHNLPPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           V+TGL NTALYCNLQLTKDGIGFCLTDLRLQNSTNIED FP  RKSY VNGKILKGWFSV
Sbjct: 61  VITGLQNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDTFPHGRKSYNVNGKILKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DI S+DLF+RVNLIQSVLSRPSLYDGTLPIAAVEDV  + P+QFWLNAE
Sbjct: 121 DITSSDLFNRVNLIQSVLSRPSLYDGTLPIAAVEDVLGIKPNQFWLNAE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. ExPASy TrEMBL
Match: A0A1S3B2A5 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103485024 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 1.06e-100
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNL PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 1   MLKCFLVIASLIFISSTFAQHNLPPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           V+TGL NTALYCNLQLTKDGIGFCLTDLRLQNSTNIED FP  RKSY VNGKILKGWFSV
Sbjct: 61  VITGLQNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDTFPHGRKSYNVNGKILKGWFSV 120

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DI S+DLF+RVNLIQSVLSRPSLYDGTLPIAAVEDV  + P+QFWLNAE
Sbjct: 121 DITSSDLFNRVNLIQSVLSRPSLYDGTLPIAAVEDVLGIKPNQFWLNAE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. ExPASy TrEMBL
Match: A0A5A7SYT5 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00490 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 1.45e-100
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKCFLVIASLIFISSTFAQHNL PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA
Sbjct: 15  MLKCFLVIASLIFISSTFAQHNLPPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 74

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           V+TGL NTALYCNLQLTKDGIGFCLTDLRLQNSTNIED FP  RKSY VNGKILKGWFSV
Sbjct: 75  VITGLQNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDTFPHGRKSYNVNGKILKGWFSV 134

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           DI S+DLF+RVNLIQSVLSRPSLYDGTLPIAAVEDV  + P+QFWLNAE
Sbjct: 135 DITSSDLFNRVNLIQSVLSRPSLYDGTLPIAAVEDVLGIKPNQFWLNAE 183

[Close]

BLAST of Cucsat.G1866.T4 vs. ExPASy TrEMBL
Match: A0A6J1GEB8 (Glycerophosphodiester phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111453175 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 8.14e-77
Identity = 122/170 (71.76%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           MLKC LVIAS  F+SS  AQHN   K +WLTL+G+ P+VIARGGLSGVFPE+SPFANQMA
Sbjct: 1   MLKCLLVIASF-FLSSASAQHNAPQKHQWLTLRGEEPIVIARGGLSGVFPESSPFANQMA 60

Query: 61  VVTGLHN-TALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFS 120
           + +GLHN T LYCNLQLTKDGIG CLTDLRLQNSTNIED FP+  K Y VNGKI+ G FS
Sbjct: 61  LASGLHNKTVLYCNLQLTKDGIGLCLTDLRLQNSTNIEDIFPQPHKHYNVNGKIISGLFS 120

Query: 121 VDIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 169
           VD MS DLF+RV++IQ++ SRPS+YDGT P+AAVEDV ++ PS+FWLN E
Sbjct: 121 VDFMSEDLFNRVDMIQNIFSRPSVYDGTWPVAAVEDVVRIKPSRFWLNVE 169

[Close]

BLAST of Cucsat.G1866.T4 vs. TAIR 10
Match: AT5G58050.1 (SHV3-like 4 )

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 79/170 (46.47%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 5   FLVIASLIFISS-----TFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQM 64
           F ++ SL   SS     T A     P +KWLTL G  P V+ARGG SG+FPE+S  AN +
Sbjct: 4   FFILFSLFLHSSVAAPKTPAAAAAVPAKKWLTLNGQEPAVVARGGFSGLFPESSISANDL 63

Query: 65  AVVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFS 124
           A+ T      + CNLQ+TKDG+G CL+D+RL N+T I   FP+ +K+Y VNG+ LKGWF 
Sbjct: 64  AIGTSSPGFTMLCNLQMTKDGVGLCLSDIRLDNATTISSVFPKAQKTYKVNGQDLKGWFV 123

Query: 125 VDIMSNDLFDRVNLIQSVLSRPSLYDGTLPIAAVEDVFKMNPSQFWLNAE 170
           +D  ++ +F++V L+Q++ SRPS++DG + ++AVEDV    P +FWL+ +
Sbjct: 124 IDYDADTIFNKVTLVQNIFSRPSIFDGQMSVSAVEDVLGTKPPKFWLSVQ 173

[Close]

BLAST of Cucsat.G1866.T4 vs. TAIR 10
Match: AT5G58170.1 (SHV3-like 5 )

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-42
Identity = 71/145 (48.97%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 25  PKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMAVVTGLHNTALYCNLQLTKDGIGFC 84
           P +KWLTL G  P V+ARGG SG+FPE+S  AN +A+ T      + CNLQ+TKDG+G C
Sbjct: 29  PAKKWLTLNGQEPAVVARGGFSGLFPESSASANDLAIGTSSPGLTMLCNLQMTKDGVGLC 88

Query: 85  LTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSVDIMSNDLFDRVNLIQSVLSRPSLY 144
           L+D+ L N+T I   FP+ +K+Y VNG+ LKGWF +D  ++ +F+ V L+Q++ SRPS++
Sbjct: 89  LSDIILDNATTISSVFPKAQKTYKVNGQDLKGWFVLDYDADTIFNNVTLVQNIFSRPSIF 148

Query: 145 DGTLPIAAVEDVFKMNPSQFWLNAE 170
           DG + ++AVEDV    P +FWL+ +
Sbjct: 149 DGQMSVSAVEDVLGTKPPKFWLSVQ 173

[Close]

BLAST of Cucsat.G1866.T4 vs. TAIR 10
Match: AT4G26690.1 (PLC-like phosphodiesterase family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-35
Identity = 75/171 (43.86%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           +L C +++  L  +++     + +PK  W TL GD PLVIARGG SG+FP++S  A   A
Sbjct: 10  LLLCGVILIQL--LAAQIHAQSKKPKSPWPTLTGDPPLVIARGGFSGLFPDSSYDAYNFA 69

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
           ++T + +  L+C++QLTKD +G C  DL ++NS++IE  +P  +KSY VNG    GWF++
Sbjct: 70  ILTSVPDAVLWCDVQLTKDALGICFPDLTMRNSSSIEAVYPTRQKSYPVNGVPTSGWFTI 129

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDG-TLPIAAVEDV-FKMNPSQFWLNAE 170
           D    DL D VNLI+ +LSR   +DG + PI  V+ V  +M PS FWLN +
Sbjct: 130 DFSLKDLKD-VNLIRGILSRSEKFDGNSNPIMTVQSVSTQMKPSFFWLNVQ 177

[Close]

BLAST of Cucsat.G1866.T4 vs. TAIR 10
Match: AT1G66980.1 (suppressor of npr1-1 constitutive 4 )

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-32
Identity = 74/171 (43.27%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 2   LKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMAV 61
           L C +V+  L F +   AQ +  P   W TL GD PLVIARGG SG+FP++S  A Q A+
Sbjct: 20  LLCGVVLLQL-FAAQVDAQRSTSP---WQTLSGDAPLVIARGGFSGLFPDSSLAAYQFAM 79

Query: 62  VTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSVD 121
           V  + +  L+C++QLTKDG G C  DL L N++N E+ +P  +KSY VNG   KGWF +D
Sbjct: 80  VVSVADVVLWCDVQLTKDGHGICFPDLNLANASNSEEVYPNRQKSYPVNGVTTKGWFPID 139

Query: 122 IMSNDLFDRV-NLIQSVLSRPSLYD-GTLPIAAVEDV-FKMNPSQFWLNAE 170
               +L   + +LI+ +LSR   +D     I+ V++V  +M P+ FWLN +
Sbjct: 140 FSLTELQKVLFSLIRGILSRSGKFDENGYSISTVQNVATQMKPALFWLNVQ 186

[Close]

BLAST of Cucsat.G1866.T4 vs. TAIR 10
Match: AT1G66970.1 (SHV3-like 2 )

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-32
Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 1   MLKCFLVIASLIFISSTFAQHNLRPKEKWLTLKGDHPLVIARGGLSGVFPEASPFANQMA 60
           +L C +V+  L F +   AQ   R   +W TL GD PLVIARGG SG++P++S  A Q+A
Sbjct: 18  LLFCGVVLIHL-FAAQIDAQ---RSTSRWQTLNGDAPLVIARGGFSGLYPDSSIAAYQLA 77

Query: 61  VVTGLHNTALYCNLQLTKDGIGFCLTDLRLQNSTNIEDAFPRDRKSYTVNGKILKGWFSV 120
            +T + +  L+C+LQLTKDG+G C  DL L N++ I+  +P   KSY+VNG   KGWF  
Sbjct: 78  TLTSVADVVLWCDLQLTKDGLGICFPDLNLANASTIDRVYPNREKSYSVNGVTTKGWFPN 137

Query: 121 DIMSNDLFDRVNLIQSVLSRPSLYDGT-LPIAAVEDVF-KMNPSQFWLNAE 170
           D    +L     LI+ +LSR   +DG    I+ +EDV   +N   FWLN +
Sbjct: 138 DFSLTEL-QNFLLIRGILSRTDRFDGNGYLISTIEDVVTTLNREGFWLNVQ 183

The following BLAST results are available for this feature:

BLAST of Cucsat.G1866.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGT9	2.4e-42	46.47	Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LVN0	2.6e-41	48.97	Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SZ11	1.4e-34	43.86	Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q7Y208	9.4e-31	43.27	Glycerophosphodiester phosphodiesterase GDPDL1 OS=Arabidopsis thaliana OX=3702 G...	[more]
D7SFH9	9.4e-31	43.27	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of Cucsat.G1866.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143578.1	5.36e-112	99.41	glycerophosphodiester phosphodiesterase GDPDL6 [Cucumis sativus] >KGN48806.1 hyp...	[more]
TYK12644.1	1.60e-100	91.12	glycerophosphodiester phosphodiesterase GDPDL6-like [Cucumis melo var. makuwa]	[more]
XP_008440682.1	2.20e-100	91.12	PREDICTED: glycerophosphodiester phosphodiesterase GDPDL6-like [Cucumis melo]	[more]
KAA0036250.1	2.99e-100	91.12	glycerophosphodiester phosphodiesterase GDPDL6-like [Cucumis melo var. makuwa]	[more]
XP_038881366.1	3.58e-86	81.66	glycerophosphodiester phosphodiesterase GDPDL6-like [Benincasa hispida]	[more]

BLAST of Cucsat.G1866.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM34	2.59e-112	99.41	Glycerophosphodiester phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_6G5019...	[more]
A0A5D3CNJ3	7.76e-101	91.12	Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3B2A5	1.06e-100	91.12	Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103485024 ...	[more]
A0A5A7SYT5	1.45e-100	91.12	Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1GEB8	8.14e-77	71.76	Glycerophosphodiester phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Cucsat.G1866.T4 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58050.1	1.7e-43	46.47	SHV3-like 4	[more]
AT5G58170.1	1.9e-42	48.97	SHV3-like 5	[more]
AT4G26690.1	1.0e-35	43.86	PLC-like phosphodiesterase family protein	[more]
AT1G66980.1	6.7e-32	43.27	suppressor of npr1-1 constitutive 4	[more]
AT1G66970.1	6.7e-32	43.27	SHV3-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	GENE3D	3.20.20.190	Phosphatidylinositol (PI) phosphodiesterase	coord: 26..175 e-value: 1.4E-10 score: 43.1
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	SUPERFAMILY	51695	PLC-like phosphodiesterases	coord: 35..170
None	No IPR available	PANTHER	PTHR43620:SF3	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED	coord: 2..169
None	No IPR available	PANTHER	PTHR43620	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	coord: 2..169
IPR030395	Glycerophosphodiester phosphodiesterase domain	PROSITE	PS51704	GP_PDE	coord: 37..176 score: 14.353965

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G1866	Cucsat.G1866	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1866.T4.E1	Cucsat.G1866.T4.E1	exon
Cucsat.G1866.T4.E2	Cucsat.G1866.T4.E2	exon
Cucsat.G1866.T4.E3	Cucsat.G1866.T4.E3	exon
Cucsat.G1866.T4.E4	Cucsat.G1866.T4.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1866.T4.C3	Cucsat.G1866.T4.C3	CDS
Cucsat.G1866.T4.C2	Cucsat.G1866.T4.C2	CDS
Cucsat.G1866.T4.C1	Cucsat.G1866.T4.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1866.T4	Cucsat.G1866.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0006071	glycerol metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008081	phosphoric diester hydrolase activity
molecular_function	GO:0008889	glycerophosphodiester phosphodiesterase activity