Cucsat.G18494.T8 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTTCTCATATATAATCCCTTAAAATAGAAAATTGCAAATTCAATACTCTTCTCAGTTTTTGATGGAAGGAGAAATAAAGGGGAAGGCAATGGAGGCTGAATAACTTTCTGATTTCTCTTCCTTACCTGAAGGAGTCGTAGCTAAAATCTTGTCGCTCACCACTCCACCGGATGCCTGCGTATCGTCGGCCGTTTCCAAGATTTTCCATGCGGCGGCTCAATCAGACATTGTGTGGAACCAATTCCTGCCCACCGATTGGGAACTTTTTATTTCTCGCAGTAACCCTAACAAACTTAAATTTGACCCAATTTTCAGTCCGAAGAAGGATATCTTTTTCTCCCTTTGCTACTTCCCAGTGCTAATTGATGACGGCAACAAGGTAATTAAGCTTTCCGATTCCACCAATTTCTTTAAATTGTAGGTGGCCGTAGTTACTGGATCGGAGGTCGGTTAACATAAATGGCTCACCCTTGCCGGAAGTCTCTTTCTTGTAATGTTGGCTTACAAATTGACCTTGGAGGCCCCATTATATTCTTTATATCTAATATATATATTGGTTCTGGTAGATTCTACATCTGCATTGACATGTGATTCTATAATATAAATACATTCAAACAGATTCTAAGAACGCTCTAAATTCATAACTTTTCATGTAATTTTAGAATCTAAAATATAATCCAAACAAATGCCAAAAACGTCAAAACTTAATTTCATTTTAAGTTTAATTTTGAAGTAACCTTGGATTCCAACAAAAACCTTTGAAATTGTTTTAATTTGAATAAGGTTTACCTCATATGTATGTTTAAATTCTTGTGAGCATTTTTTCTGGGTTAAAAATTATAATTCTCATTGTACTGCATCCCCTTTTTGTTGTGTTGAAATTTTAATTTCTTTTCAAGATTTATGGAACAATTGGGTATAGCTGAGTTTAAGAGATATTAGAACTATGAGCTGGGATATGGAGGGGGGAGTGAACTAAGCCTCTGCTACGCTTATTTCAGCTGTAGACTACTATTTTTAGTCCCTAGACCCCAACTAGTGAACTAAAAGAATGAAAAGCCACCGTTTTTAATATATATCTTTTGTTGGATTAAATTATCAATGAACTCTTTTGCACTTTTTTTTTTCTGGAACTGTGTGGGTTGAATCCTATGTTGTAGAGCTTTTCGTTGGAAAAATGGAGTGGTAAGAAATGCATAATGGTTGGAGCAAGGGATCTCTCGATCACTTGGGGTGAAAACTCTGACTCGTCCTGGGAAGACCATCCTGATTCGAGGTAATTCGAAGTCTGAAATTTGAGCAAATCTTATTTCTTCTCTTTTTTCCCTCACAATTATAACTCTCTACCTTTCTTAATGTGAATATGTAATCAGGTTTGCAGAGGTAGCTGTGCTCCTCTTTGAGTGGTGGTTTGAAATACGCGGAAGATTAAGTTGCAGAATGTTATCTCCTAAAACAGTTTATGCAGCTTACTTTTTGTTCAAGTTAGGGGAAAGGAGTTACTCTGGGTTCAATACTGAGCCTACTAATGCAACTGTGGGTATTATTGGCCATGAAAACCATCCAAAAAGTGTTTGTTTGGACCCTTATGTGGACCAACCTCTTTATCTTGACCAACTTATTCAGTGGCCTCAGAGGCCTCAGTGGCAGCGTCAGTTTGAACGACGCATGGCAGGGTTGGAGCGACCACATAAGAGACACGATGGCTGGTTTGAAATTGAATTGGGAGAGTTTATAAGTGGTGACCATGGAGACGATGAACTTGAGATGGCCCTTAAGGAGGTAAAAGGCTCTTCTTCCAAGGGTGGCCTCGTCGTGGAGGGAATTGAGATTAGGCCTAAAAAACTCAGCCGCCTTCATGCATAGGTAGATATTACAGCCATGAAATTGTTTATATAGTTTTAAAAGTTTGGGTCCATAAAATATTATTTTCATAATATTGTTGCATAAAATAATAGGCAAAGAAAAAACGTCGTTAGAAAATCATAAAAGGATTATTTATCTTTTCATATGCAAAGTTGAGTTATTTTTTCAATTAAAGTGTATCTCTGATTAATTGAAAACCAATAGTATCTTGATAACAAAAGTAAGTTCTTGATGGTTTGAAAATAGTTTTCTATATTATTTTTTAAGATTATAGTTAAGAAAATCTTGATTGTTTGGATGTTAGATTTTTTCAATTAGTAAAAATTGTAGAATTTAAAAATATTTGATTTCCTTTATTGTTAGTGAAATTTTGGTTGCTACGAACTGAGTTTTAGATTTTTTTTAAAAAAATTATTTTGGTCCAAATTTGTGACGGATAATTCTAAAAATCAATTTACTATTTTTCTAATAAAATGAAAGGTTTTATTTTAATATTTATATTGTTAACCCAAAATCTGATAATTTTTAACTAGTTGTCTACCAAAACAATTAGATTTGTTTTAAGATATTAACATATATAGCACTATATAAGAAGAAATTGTAAATATAATAAAATTCGTGAAAGTTTATCATAAAATTTGTTATATATGCAATTTCTTAAAAGTGATATATTTAATTATTATTGTGAAAATTGCTATACAAAGGAATCTTGAAGTCGGAGAATAACAATGTTCATTTCCAGGGAATAACAATGTTAACGATGTTTAGAGATGGTTGTAATTTTAATAATTAAATTATTACAATTAAATTATATTAATCATCCCTATAATAATTGATATCCTTGTAGTCATCTATCCACTAAATAATTTTATAAGGATTTTCTTGACATCCGTTAATATAAAAAAATAATAATAAAACTAAAAGAGAATAGTGTTTAGAATCATTGGAGAAGCAAATTTCAAACGAAGGGGAGTGGGAAAAGAGAAGCGAATCTGAGGGCAAAGAAATGGTTGAGTTCTCTTCGCTACCGGAGGGAGTAATAGCCAACATCTTGTCACTGACGTCTCCATTGCTGGACTTTTCATGCGGCGGCCCAGTCTGATGTTGCCTGGGAGAGGTTTATTCCTTCAGATTACCACCTTTTAATCTCTCGGATGAATCCTACCTCCAGTTCCAAGAAGGATATTTTCTTCTCCCTTTCCGATACTCCGCTGCTCATTGATGACGGCAAACAGGTAACCTCCCCATTTCCTCAATTTCTCTAAACTAAAATCGGAGTTTTATGACTTCTCGGCCGACTAAAGGCCTTTTAAGTAGAGGGTTTATGTATACCCTACCCTTTCTAAACCCTAAGTTCAAACTTGTAATAACTATAAACAAATAGAAATTAGGTTAGTCATTGGGAGGTCGAAGGCATTCCGACGCACACATTGTGCATATTATTTGATAGAATACACACTTGTACCAGTCTTATTAACAAATCACCAGAATGCCATTGGTTTATATGTACATTTTTGTCACTTGTTGAATCAGCTCTGAAGTTGTCCTGTATTCTCTCTTTTGTATTATATTCTTCAATAATTCGTATGTGGCAGAGCTTTTCATTGGACATATGGAGTGGAAAAAAATGCATAATGCTCGGAGCAAGGGACCTGTCGATTTCTGGGAGTGATACCTCTTCCCTTTGGAAATGGGTACCTCATCAAGGGTCAAGGTTTTAAGTCTAATGAGATTTGATCAATGCTTAACTCCCAGATGAGGTACCCATTGATCAAAATAAAATAAAGTGGGCTTGAGAGTGGGCTTGAGAAACAGGTTTGGAGAGGTAGTCGTGCTACTCGACATATGTTTGCTTGAAGTAAGTGGAAAGATAAGTTGCAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGAAACGCAAGTACTATGGATTCAATCTTGATCCTGTGGAGGCCATGTCGGGAGTTGTTGGCGATGATTGTCATAGTAAGAATGTTTGTTTGGACCCTGACTTGGATAGCCCATCTTGGTTGCACCAGTTTCTACCGTGGGCAGAGAGCAATCAGAACATGTCGGAGTTCGAGCAGCCAAACTGGAGATCTGATGGCTTGTTCGAAATTGAGTTAGGAGAGTTTCAAACTAATGGGAAAGATGATGAAGTTGAGGTCATTCTTAGGGAGGACAATCGTTGTTCTCCCAAGAGTGGCCTTGTCGTCGTGGGGATAGATATCCGGCCTAAAACTAGCCCTGCTTAGATGAACTCCTTGCAACCTTTTTGACATGCCAATTAAGCTTGCGTTCTTAATATTTTTTCACTGTCAACTTTCATCAACAAATTCAAATTTTTTTTAGCTGAAGCAAAACGAAATGACTAATAACAAAATGAAACTATGAAAACCATTACAAGAAAACAAAGTTTATTTTATTTTATCTAAATCAAAACTTCATCAAATCCAACTCAAGGGAACTAGAGAATGAAGTTTGACGTTAATAATGTGACACACTTTGGGAAGCAACATTCCTAAATCCTAAACAAAACTTCAGAATTGGAAAATAGAAGATACAAAAAAATTGCAAGAATTTGAGAAACTTTCAACTGCACACGAGCCAGCCTTATTCCTATGTAGCAAAAAGAAACAGAAGAAAAAATAATAATAAAAAGAGACCATTTCCAAGCACCTTACTACCAAACCAATCTCATTCTTCTATCAAGTCTCACCATATGACATATATATTTGGAACTTGAAAGATGCTTCTGTTAATCATATTGGAAAAGAAAACAAAGTTGCATAAGATATACTTTTTAAAGTTGCATAAGATCTATTAATCAGATTAGCAAAAGGAATATGAAATAAAATGTTTATCTACTATTAAATTTTGGAAACAAAATTAAATATTATATACTTTTTAAAATTGAAGTTTTTTTTTCTCAAGTCATATCAAGGTGAAATTACCTAAATAAATTATTTTACATGATTGGAATTCACTTTCCTTATAGCTACTCTCTGATTATTTTGTTGCTCTGAATCATGAACACAAGCAAGGTCCTCCCTTTATTTTCTTTTTCCTAAAAATGAGAAAAAGCTATGAATGTAAAAATTTTGAAACAACTTTTATTTATTTAAAACCTTAAATGAAATATACAAATTTGATTGATTTCATAATATATTAAAATAAATAAATAAAACTATCCCTTGACACCAAAAAAAAGCATGGAGGGTAAAGAAGGAAGAACCCATTTCTCCTCTCTGCCGGAAGGAGTAATAGCTAACATCTTGTCGCTCACCACTCCCTTAGATGTCTGCAGGTCGTCGGCGGTTTCCCGGGCTTTCCATGCGGCGGCGCAGTCCGATATCGTCTGGGACACATTTCTGCCCAACGATTTGGACGATTTTATTTCTCGGAGCAAACCTGGTGGCCTGAATTTTGATCCAATTACGAGTTCCAAGAAGGAAATCTTTTTCTCTCTTTGCAATAGCCCGCTGCTCATTGATAACGCCAAGAAGGTAAGGTTTCCGATTCCCTCGATTTCTAAATTGATGGTGGCTGTAGTTGGATGAGTGGTCGTTAGTAAGCCCTTCCTTACAGTGTAACAAAACAAATACTTTCCTGAATGGTTAGGGTCATAAAATACATTTCTATCAAATTTCATAAACATTAAAGCTAATTTTGTTATAATTCCTCCCTTACTATACCGTACCCATGCTCGGATTCATACAGAAACTTTTGAAATTATACGTAGAAGTGCTTGTATTTCAATGGAGTTTGAGAAACTTATCAAGTGCATGTGTATCATTTTGGATTGTTCTATACCAGAGTTTCACTTTCCATCGACAACAAATCAAGTAGAATATGAAATTTGTACAATGGAAAAGGGGGTTAAACTTTTGATGTCTAGAAAGTTGTAAATTGCATTCATTTAAATATCACTTGTATATTATATATTCTGAGGTTCAGTTTATTCTTCAGTTTTTATATGCCTTTAACATGCTCTCAAGACTTATTGAGCTTGAATTGGGCGAGAAATAGTTATCTGGTGGCCCCAATTTTAGGTGACTGAGTTTTGAAGTATAAATCATTTATAGTTTTATATACACTTGTGATAACTTGATTACCAATTCTATATAAGAAGCCATTATGTTCATATGCATATCTTTTGTCAGTTATTGAATCAGTGTAGCTGCTCTGTACTTTCTCTTTGTATTAATAAATTGAGTAGACTGAATCGTTGGTATGTAGTAGAGTTTATCATTGGACAAGCAGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTTTCAATTGTTTGGGATGATACCTCTGTCTACTGGACCTGGGAATCTCATCCTGAGTCAAGGTTTTAACTCTAAACAATTGGCTCAAGCCCCTTTCTTTCTCTTCTGTTTCTTTCCCTCCTGAGTCTGATACTTTGCCTTTTAATTTGGGTGTGAGAATCAGGTTTGGAGAAGTAGTTGTTATTTTCAAGGCATGGTGGCTTGAAATACGTGGAAAGTTAAGCAGTGGAATGTTGTCTCCTAGAACAACTTATGCAGCTTACATTGTGTTCAAGATGAGGGAACGTAGATACTTTGGGTTCAATATAGATTTTGTTGATGCGATGGTGGGAATTGTTGGTAGTGAACACTCTGTGAAGACTGTTTGTTTGGACCCTTATTTGGATGACCCTCTTCAACGGCGCCGACATGTACCACAAGCAGGGAGCAATCTACCAACGAACAACATATCAGGGTTGGAAATGCCAAAGGGGAGACATGATGATTGGTTTGAAACTGAGTTGGGAGAGTTTGATAACAATGGTGGAGATGATGAAGTTGAAATCATTCTCAAGGATCTCAGGTGTACTGATTCCAAGAACAGCCTCGTTGTTCAAGGTATTGAGATTAGACCTAAAATCAACCCAGAATAGACGAACTCGAGCAAACTTCTTCAAACTCATGTTAGGACTTTTATTGTCATGATAGGACATCCAGAACCCTTGTTTTATTTTGTATATAGAGAAGTTAAAAGAAACTCTACATTAGATTTTAGTCTTGTTGTTGCTATTTGTTATTCGAGTAAATAATACGCGCGATGCATATGCCCCAGAAATTTGTCATTTTGTTTTATTATATAAAATGTGTGAGATTTATATAAATTGAA ATGGTTGGAGCAAGGGATCTCTCGATCACTTGGGGTGAAAACTCTGACTCGTCCTGGGAAGACCATCCTGATTCGAGGTTTGCAGAGGTAGCTGTGCTCCTCTTTGAGTGGTGGTTTGAAATACGCGGAAGATTAAGTTGCAGAATGTTATCTCCTAAAACAGTTTATGCAGCTTACTTTTTGTTCAAGTTAGGGGAAAGGAGTTACTCTGGGTTCAATACTGAGCCTACTAATGCAACTGTGGGTATTATTGGCCATGAAAACCATCCAAAAAGTGTTTGTTTGGACCCTTATGTGGACCAACCTCTTTATCTTGACCAACTTATTCAGTGGCCTCAGAGGCCTCAGTGGCAGCGTCAGTTTGAACGACGCATGGCAGGGTTGGAGCGACCACATAAGAGACACGATGGCTGGTTTGAAATTGAATTGGGAGAGTTTATAAGTGGTGACCATGGAGACGATGAACTTGAGATGGCCCTTAAGGAGGTAAAAGGCTCTTCTTCCAAGGGTGGCCTCGTCGTGGAGGGAATTGAGATTAGGCCTAAAAAACTCAGCCGCCTTCATGCATAG MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYFLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEIRPKKLSRLHA Homology
BLAST of Cucsat.G18494.T8 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.8e-27 Identity = 72/187 (38.50%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.7e-26 Identity = 76/193 (39.38%), Postives = 104/193 (53.89%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 7.5e-26 Identity = 75/191 (39.27%), Postives = 101/191 (52.88%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.4e-25 Identity = 67/184 (36.41%), Postives = 100/184 (54.35%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.2e-24 Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. NCBI nr
Match: XP_004146356.2 (F-box protein PP2-B10 [Cucumis sativus] >KGN65432.1 hypothetical protein Csa_019671 [Cucumis sativus]) HSP 1 Score: 388 bits (997), Expect = 2.02e-134 Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. NCBI nr
Match: XP_008453627.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058300.1 F-box protein PP2-B10-like [Cucumis melo var. makuwa]) HSP 1 Score: 286 bits (733), Expect = 2.32e-94 Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. NCBI nr
Match: TYK09505.1 (F-box protein PP2-B10-like [Cucumis melo var. makuwa]) HSP 1 Score: 286 bits (731), Expect = 4.37e-94 Identity = 141/189 (74.60%), Postives = 155/189 (82.01%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida]) HSP 1 Score: 244 bits (622), Expect = 1.59e-77 Identity = 126/183 (68.85%), Postives = 139/183 (75.96%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida]) HSP 1 Score: 234 bits (597), Expect = 1.04e-73 Identity = 118/183 (64.48%), Postives = 137/183 (74.86%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy TrEMBL
Match: A0A0A0LX65 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421920 PE=4 SV=1) HSP 1 Score: 388 bits (997), Expect = 9.78e-135 Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy TrEMBL
Match: A0A5A7UT44 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006340 PE=4 SV=1) HSP 1 Score: 286 bits (733), Expect = 1.12e-94 Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy TrEMBL
Match: A0A1S3BWQ1 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1) HSP 1 Score: 286 bits (733), Expect = 1.12e-94 Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy TrEMBL
Match: A0A5D3CDA9 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G001090 PE=4 SV=1) HSP 1 Score: 286 bits (731), Expect = 2.12e-94 Identity = 141/189 (74.60%), Postives = 155/189 (82.01%), Query Frame = 0
BLAST of Cucsat.G18494.T8 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1) HSP 1 Score: 220 bits (560), Expect = 2.04e-68 Identity = 113/183 (61.75%), Postives = 133/183 (72.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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