Cucsat.G18494 (gene) Cucumber (B10) v3

Overview
NameCucsat.G18494
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionF-box protein PP2-B10-like
Locationctg3379: 2768828 .. 2773094 (+)
RNA-Seq ExpressionCucsat.G18494
SyntenyCucsat.G18494
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATTTTCTCATATATAATCCCTTAAAATAGAAAATTGCAAATTCAATACTCTTCTCAGTTTTTGATGGAAGGAGAAATAAAGGGGAAGGCAATGGAGGCTGAATAACTTTCTGATTTCTCTTCCTTACCTGAAGGAGTCGTAGCTAAAATCTTGTCGCTCACCACTCCACCGGATGCCTGCGTATCGTCGGCCGTTTCCAAGATTTTCCATGCGGCGGCTCAATCAGACATTGTGTGGAACCAATTCCTGCCCACCGATTGGGAACTTTTTATTTCTCGCAGTAACCCTAACAAACTTAAATTTGACCCAATTTTCAGTCCGAAGAAGGATATCTTTTTCTCCCTTTGCTACTTCCCAGTGCTAATTGATGACGGCAACAAGGTAATTAAGCTTTCCGATTCCACCAATTTCTTTAAATTGTAGGTGGCCGTAGTTACTGGATCGGAGGTCGGTTAACATAAATGGCTCACCCTTGCCGGAAGTCTCTTTCTTGTAATGTTGGCTTACAAATTGACCTTGGAGGCCCCATTATATTCTTTATATCTAATATATATATTGGTTCTGGTAGATTCTACATCTGCATTGACATGTGATTCTATAATATAAATACATTCAAACAGATTCTAAGAACGCTCTAAATTCATAACTTTTCATGTAATTTTAGAATCTAAAATATAATCCAAACAAATGCCAAAAACGTCAAAACTTAATTTCATTTTAAGTTTAATTTTGAAGTAACCTTGGATTCCAACAAAAACCTTTGAAATTGTTTTAATTTGAATAAGGTTTACCTCATATGTATGTTTAAATTCTTGTGAGCATTTTTTCTGGGTTAAAAATTATAATTCTCATTGTACTGCATCCCCTTTTTGTTGTGTTGAAATTTTAATTTCTTTTCAAGATTTATGGAACAATTGGGTATAGCTGAGTTTAAGAGATATTAGAACTATGAGCTGGGATATGGAGGGGGGAGTGAACTAAGCCTCTGCTACGCTTATTTCAGCTGTAGACTACTATTTTTAGTCCCTAGACCCCAACTAGTGAACTAAAAGAATGAAAAGCCACCGTTTTTAATATATATCTTTTGTTGGATTAAATTATCAATGAACTCTTTTGCACTTTTTTTTTTCTGGAACTGTGTGGGTTGAATCCTATGTTGTAGAGCTTTTCGTTGGAAAAATGGAGTGGTAAGAAATGCATAATGGTTGGAGCAAGGGATCTCTCGATCACTTGGGGTGAAAACTCTGACTCGTCCTGGGAAGACCATCCTGATTCGAGGTAATTCGAAGTCTGAAATTTGAGCAAATCTTATTTCTTCTCTTTTTTCCCTCACAATTATAACTCTCTACCTTTCTTAATGTGAATATGTAATCAGGTTTGCAGAGGTAGCTGTGCTCCTCTTTGAGTGGTGGTTTGAAATACGCGGAAGATTAAGTTGCAGAATGTTATCTCCTAAAACAGTTTATGCAGCTTACTTTTTGTTCAAGTTAGGGGAAAGGAGTTACTCTGGGTTCAATACTGAGCCTACTAATGCAACTGTGGGTATTATTGGCCATGAAAACCATCCAAAAAGTGTTTGTTTGGACCCTTATGTGGACCAACCTCTTTATCTTGACCAACTTATTCAGTGGCCTCAGAGGCCTCAGTGGCAGCGTCAGTTTGAACGACGCATGGCAGGGTTGGAGCGACCACATAAGAGACACGATGGCTGGTTTGAAATTGAATTGGGAGAGTTTATAAGTGGTGACCATGGAGACGATGAACTTGAGATGGCCCTTAAGGAGGTAAAAGGCTCTTCTTCCAAGGGTGGCCTCGTCGTGGAGGGAATTGAGATTAGGCCTAAAAAACTCAGCCGCCTTCATGCATAGGTAGATATTACAGCCATGAAATTGTTTATATAGTTTTAAAAGTTTGGGTCCATAAAATATTATTTTCATAATATTGTTGCATAAAATAATAGGCAAAGAAAAAACGTCGTTAGAAAATCATAAAAGGATTATTTATCTTTTCATATGCAAAGTTGAGTTATTTTTTCAATTAAAGTGTATCTCTGATTAATTGAAAACCAATAGTATCTTGATAACAAAAGTAAGTTCTTGATGGTTTGAAAATAGTTTTCTATATTATTTTTTAAGATTATAGTTAAGAAAATCTTGATTGTTTGGATGTTAGATTTTTTCAATTAGTAAAAATTGTAGAATTTAAAAATATTTGATTTCCTTTATTGTTAGTGAAATTTTGGTTGCTACGAACTGAGTTTTAGATTTTTTTTAAAAAAATTATTTTGGTCCAAATTTGTGACGGATAATTCTAAAAATCAATTTACTATTTTTCTAATAAAATGAAAGGTTTTATTTTAATATTTATATTGTTAACCCAAAATCTGATAATTTTTAACTAGTTGTCTACCAAAACAATTAGATTTGTTTTAAGATATTAACATATATAGCACTATATAAGAAGAAATTGTAAATATAATAAAATTCGTGAAAGTTTATCATAAAATTTGTTATATATGCAATTTCTTAAAAGTGATATATTTAATTATTATTGTGAAAATTGCTATACAAAGGAATCTTGAAGTCGGAGAATAACAATGTTCATTTCCAGGGAATAACAATGTTAACGATGTTTAGAGATGGTTGTAATTTTAATAATTAAATTATTACAATTAAATTATATTAATCATCCCTATAATAATTGATATCCTTGTAGTCATCTATCCACTAAATAATTTTATAAGGATTTTCTTGACATCCGTTAATATAAAAAAATAATAATAAAACTAAAAGAGAATAGTGTTTAGAATCATTGGAGAAGCAAATTTCAAACGAAGGGGAGTGGGAAAAGAGAAGCGAATCTGAGGGCAAAGAAATGGTTGAGTTCTCTTCGCTACCGGAGGGAGTAATAGCCAACATCTTGTCACTGACGTCTCCATTGCTGGACTTTTCATGCGGCGGCCCAGTCTGATGTTGCCTGGGAGAGGTTTATTCCTTCAGATTACCACCTTTTAATCTCTCGGATGAATCCTACCTCCAGTTCCAAGAAGGATATTTTCTTCTCCCTTTCCGATACTCCGCTGCTCATTGATGACGGCAAACAGGTAACCTCCCCATTTCCTCAATTTCTCTAAACTAAAATCGGAGTTTTATGACTTCTCGGCCGACTAAAGGCCTTTTAAGTAGAGGGTTTATGTATACCCTACCCTTTCTAAACCCTAAGTTCAAACTTGTAATAACTATAAACAAATAGAAATTAGGTTAGTCATTGGGAGGTCGAAGGCATTCCGACGCACACATTGTGCATATTATTTGATAGAATACACACTTGTACCAGTCTTATTAACAAATCACCAGAATGCCATTGGTTTATATGTACATTTTTGTCACTTGTTGAATCAGCTCTGAAGTTGTCCTGTATTCTCTCTTTTGTATTATATTCTTCAATAATTCGTATGTGGCAGAGCTTTTCATTGGACATATGGAGTGGAAAAAAATGCATAATGCTCGGAGCAAGGGACCTGTCGATTTCTGGGAGTGATACCTCTTCCCTTTGGAAATGGGTACCTCATCAAGGGTCAAGGTTTTAAGTCTAATGAGATTTGATCAATGCTTAACTCCCAGATGAGGTACCCATTGATCAAAATAAAATAAAGTGGGCTTGAGAGTGGGCTTGAGAAACAGGTTTGGAGAGGTAGTCGTGCTACTCGACATATGTTTGCTTGAAGTAAGTGGAAAGATAAGTTGCAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGAAACGCAAGTACTATGGATTCAATCTTGATCCTGTGGAGGCCATGTCGGGAGTTGTTGGCGATGATTGTCATAGTAAGAATGTTTGTTTGGACCCTGACTTGGATAGCCCATCTTGGTTGCACCAGTTTCTACCGTGGGCAGAGAGCAATCAGAACATGTCGGAGTTCGAGCAGCCAAACTGGAGATCTGATGGCTTGTTCGAAATTGAGTTAGGAGAGTTTCAAACTAATGGGAAAGATGATGAAGTTGAGGTCATTCTTAGGGAGGACAATCGTTGTTCTCCCAAGAGTGGCCTTGTCGTCGTGGGGATAGATATCCGGCCTAAAACTAGCCCTGCTTAGATGAACTCCTTGCAACCTTTTTGACATGCCAATTAAGCTTGCGTTCTTAATATTTTTTCACTGTCAACTTTCATCAACAAATTCAAATTTTTTTTAGCTGAAGCAAAACGAAATGACTAATAACAAAATGAAACTATGAAAACCATTACAAGAAAACAAAGTTTATTTTATTTTATCTAAATCAAAACTTCATCAAATCCAACTCAAGGGAACTAGAGAATGAAGTTTGACGTTAATAATGTGACACACTTTGGGAAGCAACATTCCTAAATCCTAAACAAAACTTCAGAATTGGAAAATAGAAGATACAAAAAAATTGCAAGAATTTGAGAAACTTTCAACTGCACACGAGCCAGCCTTATTCCTATGTAGCAAAAAGAAACAGAAGAAAAAATAATAATAAAAAGAGACCATTTCCAAGCACCTTACTACCAAACCAATCTCATTCTTCTATCAAGTCTCACCATATGACATATATATTTGGAACTTGAAAGATGCTTCTGTTAATCATATTGGAAAAGAAAACAAAGTTGCATAAGATATACTTTTTAAAGTTGCATAAGATCTATTAATCAGATTAGCAAAAGGAATATGAAATAAAATGTTTATCTACTATTAAATTTTGGAAACAAAATTAAATATTATATACTTTTTAAAATTGAAGTTTTTTTTTCTCAAGTCATATCAAGGTGAAATTACCTAAATAAATTATTTTACATGATTGGAATTCACTTTCCTTATAGCTACTCTCTGATTATTTTGTTGCTCTGAATCATGAACACAAGCAAGGTCCTCCCTTTATTTTCTTTTTCCTAAAAATGAGAAAAAGCTATGAATGTAAAAATTTTGAAACAACTTTTATTTATTTAAAACCTTAAATGAAATATACAAATTTGATTGATTTCATAATATATTAAAATAAATAAATAAAACTATCCCTTGACACCAAAAAAAAGCATGGAGGGTAAAGAAGGAAGAACCCATTTCTCCTCTCTGCCGGAAGGAGTAATAGCTAACATCTTGTCGCTCACCACTCCCTTAGATGTCTGCAGGTCGTCGGCGGTTTCCCGGGCTTTCCATGCGGCGGCGCAGTCCGATATCGTCTGGGACACATTTCTGCCCAACGATTTGGACGATTTTATTTCTCGGAGCAAACCTGGTGGCCTGAATTTTGATCCAATTACGAGTTCCAAGAAGGAAATCTTTTTCTCTCTTTGCAATAGCCCGCTGCTCATTGATAACGCCAAGAAGGTAAGGTTTCCGATTCCCTCGATTTCTAAATTGATGGTGGCTGTAGTTGGATGAGTGGTCGTTAGTAAGCCCTTCCTTACAGTGTAACAAAACAAATACTTTCCTGAATGGTTAGGGTCATAAAATACATTTCTATCAAATTTCATAAACATTAAAGCTAATTTTGTTATAATTCCTCCCTTACTATACCGTACCCATGCTCGGATTCATACAGAAACTTTTGAAATTATACGTAGAAGTGCTTGTATTTCAATGGAGTTTGAGAAACTTATCAAGTGCATGTGTATCATTTTGGATTGTTCTATACCAGAGTTTCACTTTCCATCGACAACAAATCAAGTAGAATATGAAATTTGTACAATGGAAAAGGGGGTTAAACTTTTGATGTCTAGAAAGTTGTAAATTGCATTCATTTAAATATCACTTGTATATTATATATTCTGAGGTTCAGTTTATTCTTCAGTTTTTATATGCCTTTAACATGCTCTCAAGACTTATTGAGCTTGAATTGGGCGAGAAATAGTTATCTGGTGGCCCCAATTTTAGGTGACTGAGTTTTGAAGTATAAATCATTTATAGTTTTATATACACTTGTGATAACTTGATTACCAATTCTATATAAGAAGCCATTATGTTCATATGCATATCTTTTGTCAGTTATTGAATCAGTGTAGCTGCTCTGTACTTTCTCTTTGTATTAATAAATTGAGTAGACTGAATCGTTGGTATGTAGTAGAGTTTATCATTGGACAAGCAGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTTTCAATTGTTTGGGATGATACCTCTGTCTACTGGACCTGGGAATCTCATCCTGAGTCAAGGTTTTAACTCTAAACAATTGGCTCAAGCCCCTTTCTTTCTCTTCTGTTTCTTTCCCTCCTGAGTCTGATACTTTGCCTTTTAATTTGGGTGTGAGAATCAGGTTTGGAGAAGTAGTTGTTATTTTCAAGGCATGGTGGCTTGAAATACGTGGAAAGTTAAGCAGTGGAATGTTGTCTCCTAGAACAACTTATGCAGCTTACATTGTGTTCAAGATGAGGGAACGTAGATACTTTGGGTTCAATATAGATTTTGTTGATGCGATGGTGGGAATTGTTGGTAGTGAACACTCTGTGAAGACTGTTTGTTTGGACCCTTATTTGGATGACCCTCTTCAACGGCGCCGACATGTACCACAAGCAGGGAGCAATCTACCAACGAACAACATATCAGGGTTGGAAATGCCAAAGGGGAGACATGATGATTGGTTTGAAACTGAGTTGGGAGAGTTTGATAACAATGGTGGAGATGATGAAGTTGAAATCATTCTCAAGGATCTCAGGTGTACTGATTCCAAGAACAGCCTCGTTGTTCAAGGTATTGAGATTAGACCTAAAATCAACCCAGAATAGACGAACTCGAGCAAACTTCTTCAAACTCATGTTAGGACTTTTATTGTCATGATAGGACATCCAGAACCCTTGTTTTATTTTGTATATAGAGAAGTTAAAAGAAACTCTACATTAGATTTTAGTCTTGTTGTTGCTATTTGTTATTCGAGTAAATAATACGCGCGATGC

Coding sequence (CDS)

ATGGTTGGAGCAAGGGATCTCTCGATCACTTGGGGTGAAAACTCTGACTCGTCCTGGGAAGACCATCCTGATTCGAGGTTTGCAGAGGTAGCTGTGCTCCTCTTTGAGTGGTGGTTTGAAATACGCGGAAGATTAAGTTGCAGAATGTTATCTCCTAAAACAGTTTATGCAGCTTACTTTTTGTTCAAGTTAGGGGAAAGGAGTTACTCTGGGTTCAATACTGAGCCTACTAATGCAACTGTGGGTATTATTGGCCATGAAAACCATCCAAAAAGTGTTTGTTTGGACCCTTATGTGGACCAACCTCTTTATCTTGACCAACTTATTCAGTGGCCTCAGAGGCCTCAGTGGCAGCGTCAGTTTGAACGACGCATGGCAGGGTTGGAGCGACCACATAAGAGACACGATGGCTGGTTTGAAATTGAATTGGGAGAGTTTATAAGTGGTGACCATGGAGACGATGAACTTGAGATGGCCCTTAAGGAGGTAAAAGGCTCTTCTTCCAAGGGTGGCCTCGTCGTGGAGGGAATTGAGATTAGGCCTAAAAAACTCAGCCGCCTTCATGCATAG

Protein sequence

MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYFLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEIRPKKLSRLHA
Homology
BLAST of Cucsat.G18494 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-27
Identity = 72/187 (38.50%), Postives = 101/187 (54.01%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+ A +LSI WG+N     W   P+SRF +VA L    WFEIRGR + R+LSP+T Y+AY
Sbjct: 108 MLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAY 167

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQR 120
            +FK  ++ Y GF      A VG++G E   + +C                      +  
Sbjct: 168 IVFKGVDKCY-GFQNVAIEAAVGVVGQEPSRRLIC----------------------FSE 227

Query: 121 QFERRMAGLERPHKRHDGWFEIELGEFIS--GDHGDDELEMALKEVKGSSSKGGLVVEGI 180
              R    + +P +R DGW EIELGEF +  G   +DE+EM+  E K  + K GL+++GI
Sbjct: 228 AIRRGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGI 271

Query: 181 EIRPKKL 185
           EIRP K+
Sbjct: 288 EIRPAKI 271

BLAST of Cucsat.G18494 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-26
Identity = 76/193 (39.38%), Postives = 104/193 (53.89%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDSSWEDHPD--SRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAA 60
           M+ A +L+I WG NS  SW   PD  +RF  VA LL    FEIRGR++ R++SPKT Y+A
Sbjct: 132 MISAMNLAIAWG-NSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSA 191

Query: 61  YFLFKLGERSYSGFNTEPTNATVGIIG---HENHPKSVCLDPYVDQPLYLDQLIQWPQRP 120
           Y ++K     Y GF        VG++G    E+  + +C D  +D+              
Sbjct: 192 YIVYKKLNICY-GFENVAVEVVVGVVGQDLEESCRRYICFDETMDE-------------- 251

Query: 121 QWQRQFERRMAG--LERPHKRHDGWFEIELGEFIS--GDHGDDELEMALKEVKGSSSKGG 180
               QF RR  G  L +P +R DGW EI++GEF +  G   DDE+EM   E K    K G
Sbjct: 252 ----QFRRRDRGKNLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRG 304

Query: 181 LVVEGIEIRPKKL 185
           L+++GIEIRP  +
Sbjct: 312 LIIQGIEIRPTNI 304

BLAST of Cucsat.G18494 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 7.5e-26
Identity = 75/191 (39.27%), Postives = 101/191 (52.88%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           ++ +RDLSITW +     SW    DSRF+E   L+   W EI G++    LSP T Y AY
Sbjct: 97  ILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAY 156

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSV---CLDPYVDQPLYLDQLIQWPQRPQ 120
            + K+  R+Y G +  P   ++ +   E   KS    CLD    Q     + + + QR Q
Sbjct: 157 LIMKVTSRAY-GLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQM----ERVFYGQREQ 216

Query: 121 WQRQFERRMAGLERPHKRHDGWFEIELGEFISGD-HGDDELE--MALKEVKGSSSKGGLV 180
                E   +    P  R DGW EIELGEF +G   GDD+ E  M+L EVKG   KGG+ 
Sbjct: 217 RMATHEVVRSHRREPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLTEVKGYQLKGGIA 276

Query: 181 VEGIEIRPKKL 185
           ++GIE+RPK L
Sbjct: 277 IDGIEVRPKPL 282

BLAST of Cucsat.G18494 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.4e-25
Identity = 67/184 (36.41%), Postives = 100/184 (54.35%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+ +++L ITWG + +   W   P+SRF ++A LL   WFEIRG+ S R+LSP T Y+AY
Sbjct: 155 MLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAY 214

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQR 120
            +FK  +R   G    P    +G++G E+  + +    Y   P                R
Sbjct: 215 IVFKTKDRC-PGLGHLPVEVGLGLVGQESSKRFI----YFIGPR--------------DR 274

Query: 121 QFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEI 180
           +  R    + +P +R DGW E ELGEF + +   DE+E ++ E+K  S K GL+++GIE 
Sbjct: 275 RGRRETRDVTKPDQREDGWMEAELGEFFN-EERCDEIEFSVIEIKSPSWKSGLIIQGIEF 318

Query: 181 RPKK 184
           RP K
Sbjct: 335 RPTK 318

BLAST of Cucsat.G18494 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.2e-24
Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 0

Query: 1   MVGARDLSITWGEN-SDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+ A +L+I WG++ +   W   P+S+F +VA L    WFE+RG++SC MLS  T Y+ Y
Sbjct: 126 MLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVY 185

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLD----------PYVDQPLYLDQLI 120
            +FK       GF+  P  A VG +G     KSV  +           +     Y     
Sbjct: 186 VVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSR 245

Query: 121 QWPQRPQW---QRQFERRMAG-------LERPHKRHDGWFEIELGEFI-----SGDHGDD 180
            +  R  W   QR+ E  + G       +  P +R DGW E+ELG+F       GD G D
Sbjct: 246 AFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSD 305

Query: 181 ELEMALKEVKGSSSKGGLVVEGIEIRPKK 184
           E+E+++ E +  + K GL+++GIEIRP++
Sbjct: 306 EIEISIMETQNGNWKSGLIIQGIEIRPER 334

BLAST of Cucsat.G18494 vs. NCBI nr
Match: XP_004146356.2 (F-box protein PP2-B10 [Cucumis sativus] >KGN65432.1 hypothetical protein Csa_019671 [Cucumis sativus])

HSP 1 Score: 388 bits (997), Expect = 2.02e-134
Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYF 60
           MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYF
Sbjct: 120 MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYF 179

Query: 61  LFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQRQ 120
           LFKLGERSYSGFN +PTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQ PQW+RQ
Sbjct: 180 LFKLGERSYSGFNIDPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQWPQWRRQ 239

Query: 121 FERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEIR 180
           FERRMAGLERPHKRHDGWFEIELGEFI GDHGDDELEMALKEVKGSSSKGGLVVEGIEIR
Sbjct: 240 FERRMAGLERPHKRHDGWFEIELGEFIGGDHGDDELEMALKEVKGSSSKGGLVVEGIEIR 299

Query: 181 PKKLSRLHA 189
           PKKLSRLHA
Sbjct: 300 PKKLSRLHA 308

BLAST of Cucsat.G18494 vs. NCBI nr
Match: XP_008453627.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058300.1 F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (733), Expect = 2.32e-94
Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLSITWGENSD  +WEDHPDSRFAEVAVL++ WW EIRGRLSCRMLSPKTVYA Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQ----WPQRP 120
           F+F + E SY GFN +P +ATVGI+GHENHPKSVCLDPY+DQP    +  Q    W +RP
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPQQRQRQRQRRAPWERRP 235

Query: 121 QWQRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVE 180
           Q        M  L+RPHKRHDGWFEIELGEFISGD  DDELEMALKEVKGSSSKGGLVVE
Sbjct: 236 Q-----SEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVE 295

Query: 181 GIEIRPKKLSR 186
           GIEIRPKK  R
Sbjct: 296 GIEIRPKKTHR 301

BLAST of Cucsat.G18494 vs. NCBI nr
Match: TYK09505.1 (F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (731), Expect = 4.37e-94
Identity = 141/189 (74.60%), Postives = 155/189 (82.01%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLSITWGENSD  +WEDHPDSRFAEVAVL++ WW EIRGRLSCRMLSPKTVYA Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQ--WPQRPQW 120
           F+F + E SY GFN +P +ATVGI+GHENHPKSVCLDPY+DQP    +  +  W +RPQ 
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPRQRQRQRRAPWERRPQ- 235

Query: 121 QRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGI 180
                  M  L+RPHKRHDGWFEIELGEFISGD  DDELEMALKEVKGSSSKGGLVVEGI
Sbjct: 236 ----SEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVEGI 295

Query: 181 EIRPKKLSR 186
           EIRPKK  R
Sbjct: 296 EIRPKKTHR 299

BLAST of Cucsat.G18494 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 244 bits (622), Expect = 1.59e-77
Identity = 126/183 (68.85%), Postives = 139/183 (75.96%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLSI WG+ S   SWE H DSRFAEVAVLL  WW EIRGR+SCRMLSPKT YAAY
Sbjct: 120 MLGARDLSIVWGDTSYYWSWEHHTDSRFAEVAVLLDVWWLEIRGRISCRMLSPKTTYAAY 179

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQR 120
           F+FK+ +R Y GFN  P +ATVGI+G E H KSVCLDPY+D P    +   W  RPQ   
Sbjct: 180 FVFKMRQRRYYGFNINPADATVGILGTEPHRKSVCLDPYLDNPQRRRRHAPWMMRPQ--- 239

Query: 121 QFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEI 180
                MAGLE P +RHDGWFEIELGEF SGD GDDE+EMAL EVKGSS+K GLVVEGIEI
Sbjct: 240 --SEDMAGLEWPPERHDGWFEIELGEFESGD-GDDEVEMALMEVKGSSAKSGLVVEGIEI 296

Query: 181 RPK 182
           RPK
Sbjct: 300 RPK 296

BLAST of Cucsat.G18494 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 234 bits (597), Expect = 1.04e-73
Identity = 118/183 (64.48%), Postives = 137/183 (74.86%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLS+ WG+ S   +WE   +SRFAEVAVL+  WW EIRGR+SCRMLSPKT YA Y
Sbjct: 121 MLGARDLSVVWGDTSGYWTWEHRLESRFAEVAVLVNVWWLEIRGRISCRMLSPKTTYAVY 180

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQR 120
           F+F +    Y GF+ +P +ATVGI+G ENH +SVCLDPY+D P    +   W  RPQ   
Sbjct: 181 FVFNMRRCYYYGFDIDPADATVGILGTENHRRSVCLDPYLDNPQGRRRHAPWMMRPQ--- 240

Query: 121 QFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEI 180
                M+GLERP KRHDGWFEIELGEF SGD GDDE+EMALKE+KGSS K GLVVEGIEI
Sbjct: 241 --SEGMSGLERPQKRHDGWFEIELGEFESGD-GDDEVEMALKELKGSSDKSGLVVEGIEI 297

Query: 181 RPK 182
           RPK
Sbjct: 301 RPK 297

BLAST of Cucsat.G18494 vs. ExPASy TrEMBL
Match: A0A0A0LX65 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421920 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 9.78e-135
Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYF 60
           MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYF
Sbjct: 120 MVGARDLSITWGENSDSSWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAYF 179

Query: 61  LFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQRQ 120
           LFKLGERSYSGFN +PTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQ PQW+RQ
Sbjct: 180 LFKLGERSYSGFNIDPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQWPQWRRQ 239

Query: 121 FERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEIR 180
           FERRMAGLERPHKRHDGWFEIELGEFI GDHGDDELEMALKEVKGSSSKGGLVVEGIEIR
Sbjct: 240 FERRMAGLERPHKRHDGWFEIELGEFIGGDHGDDELEMALKEVKGSSSKGGLVVEGIEIR 299

Query: 181 PKKLSRLHA 189
           PKKLSRLHA
Sbjct: 300 PKKLSRLHA 308

BLAST of Cucsat.G18494 vs. ExPASy TrEMBL
Match: A0A5A7UT44 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006340 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 1.12e-94
Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLSITWGENSD  +WEDHPDSRFAEVAVL++ WW EIRGRLSCRMLSPKTVYA Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQ----WPQRP 120
           F+F + E SY GFN +P +ATVGI+GHENHPKSVCLDPY+DQP    +  Q    W +RP
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPQQRQRQRQRRAPWERRP 235

Query: 121 QWQRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVE 180
           Q        M  L+RPHKRHDGWFEIELGEFISGD  DDELEMALKEVKGSSSKGGLVVE
Sbjct: 236 Q-----SEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVE 295

Query: 181 GIEIRPKKLSR 186
           GIEIRPKK  R
Sbjct: 296 GIEIRPKKTHR 301

BLAST of Cucsat.G18494 vs. ExPASy TrEMBL
Match: A0A1S3BWQ1 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 1.12e-94
Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLSITWGENSD  +WEDHPDSRFAEVAVL++ WW EIRGRLSCRMLSPKTVYA Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQ----WPQRP 120
           F+F + E SY GFN +P +ATVGI+GHENHPKSVCLDPY+DQP    +  Q    W +RP
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPQQRQRQRQRRAPWERRP 235

Query: 121 QWQRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVE 180
           Q        M  L+RPHKRHDGWFEIELGEFISGD  DDELEMALKEVKGSSSKGGLVVE
Sbjct: 236 Q-----SEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVE 295

Query: 181 GIEIRPKKLSR 186
           GIEIRPKK  R
Sbjct: 296 GIEIRPKKTHR 301

BLAST of Cucsat.G18494 vs. ExPASy TrEMBL
Match: A0A5D3CDA9 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G001090 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 2.12e-94
Identity = 141/189 (74.60%), Postives = 155/189 (82.01%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLSITWGENSD  +WEDHPDSRFAEVAVL++ WW EIRGRLSCRMLSPKTVYA Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQ--WPQRPQW 120
           F+F + E SY GFN +P +ATVGI+GHENHPKSVCLDPY+DQP    +  +  W +RPQ 
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPRQRQRQRRAPWERRPQ- 235

Query: 121 QRQFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGI 180
                  M  L+RPHKRHDGWFEIELGEFISGD  DDELEMALKEVKGSSSKGGLVVEGI
Sbjct: 236 ----SEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVEGI 295

Query: 181 EIRPKKLSR 186
           EIRPKK  R
Sbjct: 296 EIRPKKTHR 299

BLAST of Cucsat.G18494 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 2.04e-68
Identity = 113/183 (61.75%), Postives = 133/183 (72.68%), Query Frame = 0

Query: 1   MVGARDLSITWGENSDS-SWEDHPDSRFAEVAVLLFEWWFEIRGRLSCRMLSPKTVYAAY 60
           M+GARDLS+ WG+ S   +WE HP+SRFAEVAVLL  WW EIRGR+SCRMLSP T YAAY
Sbjct: 125 MLGARDLSVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAY 184

Query: 61  FLFKLGERSYSGFNTEPTNATVGIIGHENHPKSVCLDPYVDQPLYLDQLIQWPQRPQWQR 120
           F+FK+ +R Y GFN +P +A VG  G EN  KSVCLDP++D PL   + +     P    
Sbjct: 185 FVFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHV-----PLAVD 244

Query: 121 QFERRMAGLERPHKRHDGWFEIELGEFISGDHGDDELEMALKEVKGSSSKGGLVVEGIEI 180
           Q    M G ERP +RHDGWFEIELGEF S D GDDE+EM L EVKG++ K GLVV+GIEI
Sbjct: 245 QPPESMEGSERPKQRHDGWFEIELGEFQS-DSGDDEIEMVLMEVKGNTPKSGLVVQGIEI 301

Query: 181 RPK 182
           RPK
Sbjct: 305 RPK 301

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZVQ61.8e-2738.50F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1[more]
Q9ZVQ85.7e-2639.38Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1[more]
O804947.5e-2639.27F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2[more]
Q3E6P46.4e-2536.41F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1[more]
Q6NPT89.2e-2433.97F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_004146356.22.02e-13497.35F-box protein PP2-B10 [Cucumis sativus] >KGN65432.1 hypothetical protein Csa_019... [more]
XP_008453627.12.32e-9474.35PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058300.1 F-box protein... [more]
TYK09505.14.37e-9474.60F-box protein PP2-B10-like [Cucumis melo var. makuwa][more]
XP_038878468.11.59e-7768.85F-box protein PP2-B10-like [Benincasa hispida][more]
XP_038880064.11.04e-7364.48F-box protein PP2-B10-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0LX659.78e-13597.35F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421920 PE=4 ... [more]
A0A5A7UT441.12e-9474.35F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... [more]
A0A1S3BWQ11.12e-9474.35F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1[more]
A0A5D3CDA92.12e-9474.60F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A6J1C0X72.04e-6861.75F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 S... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 1..181
e-value: 2.5E-44
score: 150.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 1..184
NoneNo IPR availablePANTHERPTHR32278:SF71SUBFAMILY NOT NAMEDcoord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G18494.T10Cucsat.G18494.T10mRNA
Cucsat.G18494.T11Cucsat.G18494.T11mRNA
Cucsat.G18494.T1Cucsat.G18494.T1mRNA
Cucsat.G18494.T3Cucsat.G18494.T3mRNA
Cucsat.G18494.T8Cucsat.G18494.T8mRNA
Cucsat.G18494.T9Cucsat.G18494.T9mRNA
Cucsat.G18494.T16Cucsat.G18494.T16mRNA
Cucsat.G18494.T14Cucsat.G18494.T14mRNA
Cucsat.G18494.T4Cucsat.G18494.T4mRNA
Cucsat.G18494.T5Cucsat.G18494.T5mRNA
Cucsat.G18494.T12Cucsat.G18494.T12mRNA
Cucsat.G18494.T13Cucsat.G18494.T13mRNA
Cucsat.G18494.T2Cucsat.G18494.T2mRNA
Cucsat.G18494.T15Cucsat.G18494.T15mRNA
Cucsat.G18494.T6Cucsat.G18494.T6mRNA
Cucsat.G18494.T7Cucsat.G18494.T7mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding