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Cucsat.G16450.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTGATGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTCGCAACTGGATGCGGTAAATTGTGATTCTATCCTTTTTGGCAGGCTTGATTTTTGTTTTTTTTTTTTTTCCCCTCGGTACGAACGAGTTGTTTGCGGATTTTACTTTTGTTCCCTCTTTGAATGTAGCGTTAGGAGAGGACTAGGAGATCGTGTGACCTTTTCTTTGCTTTCTTGAAACTTATATGTCTGATTATAAGTGATTCTGTTGCTTTTGTGGCGCCTTTAGAAATTTAATGGTAAAGTGGTTTTTGGGTATCTCCCATTTGGAGTTATGAAACTTGCAAGACAGTGGAGGTGTTTATGTACTTGCTTATAACTGGAGTTTCAGTTCCGTGTCTTTACCTTTTTTCTGTTTATTAATCCCCTTTTTCACCTTTGCGATTCAATGGCTGTGGAGAAGAAATTCTTTTTGCAATGTTTGATTTATTATTTATCTTTTCCGTTTGTATCCGTGTTTAGTGTTTATGTGTATTAATTAGGTCGTGTTTGTTTTTGTTATCTATTTGGTTTTTGGTTTTTAATTTTTGACAACTAAGCCTATACACTTTCTTTTACCTCTACTTTTTATCAATGTTTTCAAAATCAGGCCAAATTATCGAGTGTTGAATGATTTCATTAAATTATAGATCAAAGTCACGTCTTTTAAAATTTTAGTTAATGGAAATGATTTCTCAATTGAATTCTTGTGAACAGGAGCAAACACATTGGACAGACGAGAAACATAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCAACATAGGCCTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATATCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGTGAGTTTCCTATCTCATTCCTCTACCTTCTTAATGATTTCCTCTTGTTATATGTTTCTTTTTTAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGGTAATTTGATCAGTGCCATATGTTCTTGAAAGTTTCTCTTCTAGAATTTTCATCTCTTTTATGTAGTTGGTTGGGTTCTTTATGTACTCTTTTCTTATGTCTGAGTGGTATCCAATCTACCCCTCAATCTCCTCTTGTAGACACACCTGAACACATCGTTCATGTTTACCAAACCCCTTACTGGAGAAAGTTTTCCAGACTCTCACTTTTTGTTGAAGACCTTCTAATATACTAAAATTTGTAATCTATATTCTCAATACTCATTATGCATGTACATTAACTGTGAATTGCGGTCTTCCAATCATATTTTGTAATGGTGAAGGTTTTAACTTTTGCAATAATTATTTTGGCTGTAGTATTTCCCTCTAGCACCATTTAGATGCACTCACTTTTCTGATTTAATTTTGTGTTGGTGTACCAATATGACCATCACTTTGTGATGTTCCCACCTGGCACGCCACAGTACTGCATCAGTTGAAGTTTTGCAAATCTTCTTTCCAAAATTATCACGTGTTTGCCTAAACTTTGTGTTCTCCAAATGTATGTCTTGAGCATGTGAGTTGTAAAATCTGTAAGTGAATCTTAGGATATTGTGTTATCTTCTTAGCATTGGAAATTCTACATGCTTTGATATATTAATTGGATAGTTTCAACGGTTTTCAGTGTTGTTATAGCTTTGTTCCCATAGCATGTTTTTAGTGTTTACAGATGCACACCAGGGTTACAAGATTTAATGTCATACTTCTTCATGTTATATTTCAATTAAGAATTCATGTTCTCACTGATTGCATATCTTATTCATTTGAAGACGTTCGATGAGTTAGTGGAAAAGTACAAATCCTTTCTTTAAAGTTAAATGAGCACTTGTGTGCATTGTATCAGTGGAAGAAACAATTAAAACTGAGTAGACATGTCTGGGATAGTGGGATGGACTGCATTATGGATACTGATGAACTACTAGATGAAGCTAGGCTGATGTTACTAATTTTAGGACAGTAGCTGTTTAGGAATGAATCAAAACAGAAAATCTTGGGATGATAAGATTTTGGTCAACTTAGAGGAGCCACGAGGCATACAGAACTATCCTTCTTTAATGAATGAAAATGATTCCGACAGACAGAGCTACTTCAATATTGGAGTTGAACCAAAAGAAAAGAGCAGTTGTGGTTGTGGTGACACTCCAACATGTCTCAATCAGTGAGATTCTCATAAAGATTTCTATTTCCCCTTTGAATATGTATAAATGTTCCGGAAGAGTAGAAAACCTGCTGCAGAATAATTTTATTGTTATTCATAATTCTGCAAGAAATAACAAATAGATGCTTTAAAGAGAACAATGTTTGTTTAATCAAAGGACGAGATGCCAAAGGGAAAGTTCTTCCTTTCTCATCTTAGGTGCATGCTGCTACCACACTTCCTGTTGAAGAAGTCTCCCTGACATAGCTTGGAATTTAAAAAAAATATCAATTTCATAAGATTCATAATTTGGAAATAATTGATGCTACATACGTTATTGCTACCATTGCAAAGTTTAATGTGATTTTCCTGTTGCAAACTAATTTGGTGTCTTTTATCTCTTCATTTTGTCTTCTATGCAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGCCCAGGTTAATCATGGGACTACCTTAGACTTTTCTTTAGATATCTTATAATTTCATCATCTAAATGATCTGAGACTGATATGCTGCTATTAATCTCTTAGGTTGTACCATTTAAAAGATTATCCTAAAAAAGATAAAAAACCAGATGGCATATCTTCTGAGCATCTTCAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACTGCGTAAGAGGGAGCGACAACAATTCATTCCAACATGTGAACAGCCAGATTTGTGATACGGTTTTGTTTTCATTTCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGTAAGGAGAAAATATGTTTGTATATGGTACAAGCTAAACTTTTACGTAGTTCAAATATTGAGTGAAATACATGTTGACCCTATCTTTTCTCCTGGTTTCCTTTTTCTTGGAGTTTAAAAGGATGGAAATTCTACAACTAGATGTAGGGAAAGAATATACATGCTATAGAGAAGCTAGACACCCTGATAGTGAGATAGATACACAACCTTTTTAAATTTGTTTGAAATACTCCCATTATTAAGTTTTGTTAGAAACCTCAAGTGTAAATCATTACATAAATCAAAATGTGTCATTCTTTTGTGACACTGAAAAAGAGTTGAGCAAACTTATTGATTTTC ATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGGTAATTTGATCAGTGCCATATGTTCTTGA MVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITGNLISAICS Homology
BLAST of Cucsat.G16450.T3 vs. NCBI nr
Match: XP_004136978.1 (cold-regulated protein 27 isoform X1 [Cucumis sativus]) HSP 1 Score: 201 bits (511), Expect = 7.27e-63 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. NCBI nr
Match: XP_008454952.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]) HSP 1 Score: 186 bits (473), Expect = 4.20e-57 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. NCBI nr
Match: KAA0031301.1 (Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK06753.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 186 bits (473), Expect = 5.13e-56 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. NCBI nr
Match: XP_022952081.1 (uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]) HSP 1 Score: 154 bits (389), Expect = 2.40e-44 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. NCBI nr
Match: XP_022952080.1 (uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]) HSP 1 Score: 154 bits (389), Expect = 2.60e-44 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. ExPASy TrEMBL
Match: A0A0A0K7Z2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1) HSP 1 Score: 201 bits (511), Expect = 3.52e-63 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. ExPASy TrEMBL
Match: A0A1S3BZU8 (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1) HSP 1 Score: 186 bits (473), Expect = 2.04e-57 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. ExPASy TrEMBL
Match: A0A5D3C4A3 (Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00540 PE=4 SV=1) HSP 1 Score: 186 bits (473), Expect = 2.48e-56 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. ExPASy TrEMBL
Match: A0A6J1GJA3 (uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1) HSP 1 Score: 154 bits (389), Expect = 1.16e-44 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Cucsat.G16450.T3 vs. ExPASy TrEMBL
Match: A0A6J1GKR5 (uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1) HSP 1 Score: 154 bits (389), Expect = 1.26e-44 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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