Cucsat.G16450 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16450
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Cold regulated protein 27, putative isoform 2
Location	ctg2387: 95 .. 3891 (+)
RNA-Seq Expression	Cucsat.G16450
Synteny	Cucsat.G16450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGATGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTCGCAACTGGATGCGGTAAATTGTGATTCTATCCTTTTTGGCAGGCTTGATTTTTGTTTTTTTTTTTTTTCCCCTCGGTACGAACGAGTTGTTTGCGGATTTTACTTTTGTTCCCTCTTTGAATGTAGCGTTAGGAGAGGACTAGGAGATCGTGTGACCTTTTCTTTGCTTTCTTGAAACTTATATGTCTGATTATAAGTGATTCTGTTGCTTTTGTGGCGCCTTTAGAAATTTAATGGTAAAGTGGTTTTTGGGTATCTCCCATTTGGAGTTATGAAACTTGCAAGACAGTGGAGGTGTTTATGTACTTGCTTATAACTGGAGTTTCAGTTCCGTGTCTTTACCTTTTTTCTGTTTATTAATCCCCTTTTTCACCTTTGCGATTCAATGGCTGTGGAGAAGAAATTCTTTTTGCAATGTTTGATTTATTATTTATCTTTTCCGTTTGTATCCGTGTTTAGTGTTTATGTGTATTAATTAGGTCGTGTTTGTTTTTGTTATCTATTTGGTTTTTGGTTTTTAATTTTTGACAACTAAGCCTATACACTTTCTTTTACCTCTACTTTTTATCAATGTTTTCAAAATCAGGCCAAATTATCGAGTGTTGAATGATTTCATTAAATTATAGATCAAAGTCACGTCTTTTAAAATTTTAGTTAATGGAAATGATTTCTCAATTGAATTCTTGTGAACAGGAGCAAACACATTGGACAGACGAGAAACATAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCAACATAGGCCTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATATCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGTGAGTTTCCTATCTCATTCCTCTACCTTCTTAATGATTTCCTCTTGTTATATGTTTCTTTTTTAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGGTAATTTGATCAGTGCCATATGTTCTTGAAAGTTTCTCTTCTAGAATTTTCATCTCTTTTATGTAGTTGGTTGGGTTCTTTATGTACTCTTTTCTTATGTCTGAGTGGTATCCAATCTACCCCTCAATCTCCTCTTGTAGACACACCTGAACACATCGTTCATGTTTACCAAACCCCTTACTGGAGAAAGTTTTCCAGACTCTCACTTTTTGTTGAAGACCTTCTAATATACTAAAATTTGTAATCTATATTCTCAATACTCATTATGCATGTACATTAACTGTGAATTGCGGTCTTCCAATCATATTTTGTAATGGTGAAGGTTTTAACTTTTGCAATAATTATTTTGGCTGTAGTATTTCCCTCTAGCACCATTTAGATGCACTCACTTTTCTGATTTAATTTTGTGTTGGTGTACCAATATGACCATCACTTTGTGATGTTCCCACCTGGCACGCCACAGTACTGCATCAGTTGAAGTTTTGCAAATCTTCTTTCCAAAATTATCACGTGTTTGCCTAAACTTTGTGTTCTCCAAATGTATGTCTTGAGCATGTGAGTTGTAAAATCTGTAAGTGAATCTTAGGATATTGTGTTATCTTCTTAGCATTGGAAATTCTACATGCTTTGATATATTAATTGGATAGTTTCAACGGTTTTCAGTGTTGTTATAGCTTTGTTCCCATAGCATGTTTTTAGTGTTTACAGATGCACACCAGGGTTACAAGATTTAATGTCATACTTCTTCATGTTATATTTCAATTAAGAATTCATGTTCTCACTGATTGCATATCTTATTCATTTGAAGACGTTCGATGAGTTAGTGGAAAAGTACAAATCCTTTCTTTAAAGTTAAATGAGCACTTGTGTGCATTGTATCAGTGGAAGAAACAATTAAAACTGAGTAGACATGTCTGGGATAGTGGGATGGACTGCATTATGGATACTGATGAACTACTAGATGAAGCTAGGCTGATGTTACTAATTTTAGGACAGTAGCTGTTTAGGAATGAATCAAAACAGAAAATCTTGGGATGATAAGATTTTGGTCAACTTAGAGGAGCCACGAGGCATACAGAACTATCCTTCTTTAATGAATGAAAATGATTCCGACAGACAGAGCTACTTCAATATTGGAGTTGAACCAAAAGAAAAGAGCAGTTGTGGTTGTGGTGACACTCCAACATGTCTCAATCAGTGAGATTCTCATAAAGATTTCTATTTCCCCTTTGAATATGTATAAATGTTCCGGAAGAGTAGAAAACCTGCTGCAGAATAATTTTATTGTTATTCATAATTCTGCAAGAAATAACAAATAGATGCTTTAAAGAGAACAATGTTTGTTTAATCAAAGGACGAGATGCCAAAGGGAAAGTTCTTCCTTTCTCATCTTAGGTGCATGCTGCTACCACACTTCCTGTTGAAGAAGTCTCCCTGACATAGCTTGGAATTTAAAAAAAATATCAATTTCATAAGATTCATAATTTGGAAATAATTGATGCTACATACGTTATTGCTACCATTGCAAAGTTTAATGTGATTTTCCTGTTGCAAACTAATTTGGTGTCTTTTATCTCTTCATTTTGTCTTCTATGCAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGCCCAGGTTAATCATGGGACTACCTTAGACTTTTCTTTAGATATCTTATAATTTCATCATCTAAATGATCTGAGACTGATATGCTGCTATTAATCTCTTAGGTTGTACCATTTAAAAGATTATCCTAAAAAAGATAAAAAACCAGATGGCATATCTTCTGAGCATCTTCAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACTGCGTAAGAGGGAGCGACAACAATTCATTCCAACATGTGAACAGCCAGATTTGTGATACGGTTTTGTTTTCATTTCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGTAAGGAGAAAATATGTTTGTATATGGTACAAGCTAAACTTTTACGTAGTTCAAATATTGAGTGAAATACATGTTGACCCTATCTTTTCTCCTGGTTTCCTTTTTCTTGGAGTTTAAAAGGATGGAAATTCTACAACTAGATGTAGGGAAAGAATATACATGCTATAGAGAAGCTAGACACCCTGATAGTGAGATAGATACACAACCTTTTTAAATTTGTTTGAAATACTCCCATTATTAAGTTTTGTTAGAAACCTCAAGTGTAAATCATTACATAAATCAAAATGTGTCATTCTTTTGTGACACTGAAAAAGAGTTGAGCAAACTTATTGATTTTC

Coding sequence (CDS)

ATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGGTAATTTGATCAGTGCCATATGTTCTTGA

Protein sequence

MVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITGNLISAICS

Homology

[Close]

BLAST of Cucsat.G16450 vs. NCBI nr
Match: XP_011658902.1 (cold-regulated protein 28 isoform X2 [Cucumis sativus] >KAE8645863.1 hypothetical protein Csa_017049 [Cucumis sativus])

HSP 1 Score: 335 bits (858), Expect = 5.15e-115
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ 60
           QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ
Sbjct: 58  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ 117

Query: 61  HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE 120
           HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE
Sbjct: 118 HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE 177

Query: 121 VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS 164
           VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Sbjct: 178 VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS 221

[Close]

BLAST of Cucsat.G16450 vs. NCBI nr
Match: XP_004136978.1 (cold-regulated protein 27 isoform X1 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 2.63e-99
Identity = 156/196 (79.59%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV-- 60
           QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSE+  
Sbjct: 58  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMV 117

Query: 61  -------RQHI-----------------------HKKSGRKQCSLETPDLLEECESCSDR 120
                  + +I                       H  S  KQCSLETPDLLEECESCSDR
Sbjct: 118 LQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDR 177

Query: 121 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 164
           RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS
Sbjct: 178 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 237

[Close]

BLAST of Cucsat.G16450 vs. NCBI nr
Match: XP_008454953.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo])

HSP 1 Score: 291 bits (744), Expect = 1.20e-97
Identity = 147/164 (89.63%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ 60
           QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSEVRQ
Sbjct: 58  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSEVRQ 117

Query: 61  HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE 120
           HIHKKSGRKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC NSYTIITE
Sbjct: 118 HIHKKSGRKQCSLETPDLLEECGSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTIITE 177

Query: 121 VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS 164
           VSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Sbjct: 178 VSDQNFVDNQPGELSGGMPTAKRLKKASSGFLDNAQVVPFKRLS 221

[Close]

BLAST of Cucsat.G16450 vs. NCBI nr
Match: XP_008454952.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo])

HSP 1 Score: 252 bits (644), Expect = 5.72e-82
Identity = 139/196 (70.92%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV-- 60
           QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSE+  
Sbjct: 58  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMV 117

Query: 61  -------RQHI-----------------------HKKSGRKQCSLETPDLLEECESCSDR 120
                  + +I                       H  S  KQCSLETPDLLEEC SCSDR
Sbjct: 118 LQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDR 177

Query: 121 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 164
           RHIR+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKAS
Sbjct: 178 RHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKAS 237

[Close]

BLAST of Cucsat.G16450 vs. NCBI nr
Match: XP_038887004.1 (cold-regulated protein 28 isoform X2 [Benincasa hispida])

HSP 1 Score: 239 bits (609), Expect = 4.63e-77
Identity = 122/164 (74.39%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ 60
           QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR  HALS +QKM  KP  P+ISSSEVRQ
Sbjct: 58  QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPNISSSEVRQ 117

Query: 61  HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE 120
           HIH K GRKQC+ E PD+LEEC SCSDRRH+R  +NSC SAR+SQ   PCC +S  IITE
Sbjct: 118 HIHSKIGRKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITE 177

Query: 121 VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS 164
           VSDQNFVD+ P ELS G+PIAKRLKK SSD S + QVVP+KR S
Sbjct: 178 VSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS 221

[Close]

BLAST of Cucsat.G16450 vs. ExPASy TrEMBL
Match: A0A0A0K7Z2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 1.28e-99
Identity = 156/196 (79.59%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV-- 60
           QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSE+  
Sbjct: 58  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMV 117

Query: 61  -------RQHI-----------------------HKKSGRKQCSLETPDLLEECESCSDR 120
                  + +I                       H  S  KQCSLETPDLLEECESCSDR
Sbjct: 118 LQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDR 177

Query: 121 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 164
           RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS
Sbjct: 178 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 237

[Close]

BLAST of Cucsat.G16450 vs. ExPASy TrEMBL
Match: A0A1S3BZQ8 (uncharacterized protein LOC103495241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 5.81e-98
Identity = 147/164 (89.63%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ 60
           QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSEVRQ
Sbjct: 58  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSEVRQ 117

Query: 61  HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE 120
           HIHKKSGRKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC NSYTIITE
Sbjct: 118 HIHKKSGRKQCSLETPDLLEECGSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTIITE 177

Query: 121 VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS 164
           VSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Sbjct: 178 VSDQNFVDNQPGELSGGMPTAKRLKKASSGFLDNAQVVPFKRLS 221

[Close]

BLAST of Cucsat.G16450 vs. ExPASy TrEMBL
Match: A0A1S3BZU8 (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 2.77e-82
Identity = 139/196 (70.92%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV-- 60
           QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSE+  
Sbjct: 58  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMV 117

Query: 61  -------RQHI-----------------------HKKSGRKQCSLETPDLLEECESCSDR 120
                  + +I                       H  S  KQCSLETPDLLEEC SCSDR
Sbjct: 118 LQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDR 177

Query: 121 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 164
           RHIR+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKAS
Sbjct: 178 RHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKAS 237

[Close]

BLAST of Cucsat.G16450 vs. ExPASy TrEMBL
Match: A0A5D3C4A3 (Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00540 PE=4 SV=1)

HSP 1 Score: 238 bits (606), Expect = 2.59e-75
Identity = 131/188 (69.68%), Postives = 136/188 (72.34%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV-- 60
           QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSE+  
Sbjct: 58  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMV 117

Query: 61  -------RQHI-----------------------HKKSGRKQCSLETPDLLEECESCSDR 120
                  + +I                       H  S  KQCSLETPDLLEEC SCSDR
Sbjct: 118 LQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDR 177

Query: 121 RHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKAS 156
           RHIR+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKAS
Sbjct: 178 RHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKAS 237

[Close]

BLAST of Cucsat.G16450 vs. ExPASy TrEMBL
Match: A0A6J1JIM0 (uncharacterized protein LOC111486142 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486142 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 1.85e-74
Identity = 121/164 (73.78%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 1   QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQ 60
           QLDA QTHWTDEKHR YL SLEASFVQ+LHQ+R + ALS KQKMR +P  P ISSSEVRQ
Sbjct: 60  QLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRPSMPHISSSEVRQ 119

Query: 61  HIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITE 120
           +IH KSGRKQC+LETPDL+EE  S SDRRH+R   NS R AR+SQ   PCC  SYTIITE
Sbjct: 120 YIHSKSGRKQCTLETPDLIEESGSFSDRRHLRNTKNSYRFARSSQQIPPCCRESYTIITE 179

Query: 121 VSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS 164
           VSDQNFVDN PGE+S GMP AKRLKKASSD S + QVVP+KR S
Sbjct: 180 VSDQNFVDNHPGEVSGGMPTAKRLKKASSDSSANDQVVPYKRPS 223

The following BLAST results are available for this feature:

BLAST of Cucsat.G16450 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G16450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658902.1	5.15e-115	100.00	cold-regulated protein 28 isoform X2 [Cucumis sativus] >KAE8645863.1 hypothetica...	[more]
XP_004136978.1	2.63e-99	79.59	cold-regulated protein 27 isoform X1 [Cucumis sativus]	[more]
XP_008454953.1	1.20e-97	89.63	PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo]	[more]
XP_008454952.1	5.72e-82	70.92	PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]	[more]
XP_038887004.1	4.63e-77	74.39	cold-regulated protein 28 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G16450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Z2	1.28e-99	79.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1	[more]
A0A1S3BZQ8	5.81e-98	89.63	uncharacterized protein LOC103495241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BZU8	2.77e-82	70.92	uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C4A3	2.59e-75	69.68	Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1JIM0	1.85e-74	73.78	uncharacterized protein LOC111486142 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 1..91
None	No IPR available	PANTHER	PTHR33676:SF17	REGULATED GENE 27, PUTATIVE ISOFORM 2-RELATED	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16450.T3	Cucsat.G16450.T3	mRNA
Cucsat.G16450.T2	Cucsat.G16450.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold