Cucsat.G15014.T2 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G15014.T2
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionras-related protein RABC2a-like
Locationctg191: 118000 .. 121820 (-)
RNA-Seq ExpressionCucsat.G15014.T2
SyntenyCucsat.G15014.T2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTCGTGAAGACTTTTTTCCTTTTTCATACGAACAATTGAACAAAGAGACAAATAATGGGTGTTGTTGCAGGCCATAGAAGTAAACAAAAAGCGGAGAGCCCATCGATGACTAGTTGTACACACGTACACTACCGCCTCTCGCCAGCTCCTTCATTGTTACACTTCCATTCTTCTCAAAACGAATTATTTCTCTCTTTTCCCAATGATTTTGATTTCTTCTTCTTCTTCTTCTTCTTTCTGAGAAAAGGTTACTCTCAAAGAAACTTTAAAAGGGGTGGAACAGAAAAAAGGTTGCTTGTTTTGCTTGTTTGTGAGTTGTGAGGTAGAAGAAGAAGAAGAAGAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTCTCTCTCTCTCTCTATATATATATGTGTGTGTGTGTGTGTGTGTGTGCGCGTGCATGTTTTGATGATTAATTCTCATACCCAGATGCACCATTTCTGAGTTTTGTTCATATTTTAATCCTCAAAGAAATCTCGATAGCTCTGTTGGTTGGTTGGACATATGTTGATCAGATACTCTTATTTTTTCTTCTTCTTTGTGGTTACTTTGCTGTTTATAGTTTTCTGATTGATTTCTGATATTTCAAGTTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGAGCTAGTGGCTTTGAACCAACTTTGTGGTTTAGTAAAATTTGTTCCCATATACTTGTTGTTTAACAAGTATCGAGATGATTAAATTTACCACAACGCATTTGGGCTTTTAGGTTCATTGGTGAATTAACATGTACTAGAGCAGGACGTTTTGTGTTTGAAATATTGTCATTTCCACACTATTAATATTAATTTTCATTTGTTGGGTATTTTAGGAATTCTCAAGCCCATATCACAAGTGAGAGAAGTGTTAAAACGTTGATATAATTAAATTTACCATAACCAATCAACTAAGTTTTGAGTTTAGGATCATTTAGCAATTCATGACTTAGGAGGGCTATTGTGTCCTTCGAAAGAGCAGATTATACTTGGTGATGCAGGTGCAGGGTGCCCTTAAGGTTTTCATCATTGAGGAGTTTGTAGTGACAATTAAAAGGTCGCCTAGAGAGAGTAGTTTTTTTTTTCTTTCTTTCTCAAACAATTAATTTTTGTGAGAGAAGCTTGTGATTATCATGGTTTATGGATTGGACTGTAAATTGTGCATCGCAAATGTTTGTAATGCATCACTCCCCATTTTAATCACTACTGCACAAAGTTCCATGTCCCATTTAAGTTTAAAATACTGTTGCAACAAAAAGCAAGAATATTATGTAAGATGGATTGGATGGTTGATACTATTTTAACCTTACAACTCCTCCCTTCCTCTGTTTAAGTGTGCTGCGGAGAAGCAGCCTTCTTTAACTTCCCGTTGCTCTCGTGTAATCTCCATTTTGTGCATTGCTCCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGGTAACTGGATGATTGACTAGTTCTTTCTGGTTACATTTTTACTATTTTACTTGTCCCAGCTTATCTACATAGGATATTTTATGAAGTTTTCTTTTTCCCATCCAACGTGAGAAAATAACAGTTGTTCAGGTGTTATAAAAAACTAATGTGATTCAATGCTCTTTGTCGAGGGTTTTCTTTTCCCCATTTCGTTTACGACACTTGCCAGTTTGATGCTTTCGAGCATGTCTTTATCCTATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGGTATGATAGAAAGGAGACAAAAATTCTCTTTCCACAATTGTCCTGAAAATAAACTTCGAAAGTTTAATCAAGACTCTGTTCAATGATATTAAATGAAAAACAATCAGAATTTGAGAGCATATGGAGACTTTTTTCTTGGTAACTGAGACAACTAGAATTGCGAATTGACATTAGAAATAGACTAAAGAGACTGAGAATCATGCTTCACCTTCATCTTTTATATTCTCTCATACAGACAGTTAATAGAAGTTGAGGCATTTGTTTGCCTGTCCGAGTTAAGCAGTATTGAAAACAAACGCTCCATTCAAAGCAGTTGGCTGTTTTATTTTCCGTCATGCCAACAACATCTGACACCTTTTTTCTCCTCATTTATGTTGTGTTCTTTTTCCATGTTTTCTTTCTTGCGTTTTATAAGTATCCGATATCTTTCTATTTTGGAAACTATCTCTCATGCCATGTTTTCTCACCATTGAATGTTTTGAATTTAGTTTGAACTTCATGAGGCCTGACACTGATCTATGTTTCACCATTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGTAAGTTTGTACTACTATTCCACATCCATCCTTTGTCAACATTCTGTTTCCATACTGTCTTAACTATCATGCATTGGACAACATTGATAATAGTCAAACCTTTAATCCTTCATTCCAACTTACATTACATTAGGAGAGAATTTTTAAATCATGTTTTTAAGTGTGGCTGCCATGTTCACTGAATATTATTGACAGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGGTAACACTCTTAATTGTTATAGTGGAACTAAATGTCGACAGTGCTCCTAAGTATGGTCACTGCACAGCGTACACCGGGTGATTTGAAAAATTGGGAAAAAGAGGTGTGTTCAAAACTATTGAGGGAGAAGGGGTGTCTTTTTTATGTCATTTTGTGGAGTGGGTCCCACTAGCTATAAATTATTATTATTACTATTAGTACTACTACTGAAAACTTTCATTTATTTTCCATGTTGGGTTGGCTGTAAAGAACGATCGAAACCCGATCTTCAATGCCAAATATATTTTATTTCATGGCCTTTGGGCATGGTCTAAGTGGTTTATCGTATATAATCCAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTAACGGCACAAAACAGAACTTACAGAAACAGATTTAGAAGATCTTAGATACTGCTGGTAGAAAATGTTGATCAGAACAGACCCAAGAAAATACACCAAGGGGAAGATTCCATGATCTTTTGCAATTCCATTTTGGCTACCACTGTTTCCAGCAGTTTTCTTTTTCTATCTTAAAAATGCATTTCAATAGTATCTTTAGGATCTCTGTATATGGTTGGTTATATTTTGGGCAAAAATGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAAAATATGTAATAAAAAATATGTAGATAATGTGAATACAGTTTGTTTATTTATTTTTTGTTTTAGTTTTATATATTGATAAGGGCTATTATGCTGTAGAAGCTTCCTTATACTTTGGTCTTAAATC

Coding sequence (CDS)

ATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGA

Protein sequence

MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Homology
[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-56
Identity = 108/159 (67.92%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 2   VTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVEL 61
           +TVGGK+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+EL
Sbjct: 54  LTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIEL 113

Query: 62  YLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSS 121
           Y TN+EC+++LVGNKVDR S+R V+ EEG+ +AK+   +FLECSARTR+NV++CF+EL+ 
Sbjct: 114 YSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELAL 173

Query: 122 KMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDR-GCC 160
           K+MEVPSLLE GS  VK+ IL   + + E + N + GCC
Sbjct: 174 KIMEVPSLLEEGSSAVKRNIL---KQKPEHQTNTQSGCC 209

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-50
Identity = 98/137 (71.53%), Postives = 116/137 (84.67%), Query Frame = 0 

Query: 4   VGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYL 63
           V GK+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY 
Sbjct: 56  VRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYS 115

Query: 64  TNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKM 123
           TN +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ CF+EL+ K+
Sbjct: 116 TNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKI 175

Query: 124 MEVPSLLENGSVVVKQK 141
           MEVPSLLE GS  VK+K
Sbjct: 176 MEVPSLLEEGSSSVKRK 192

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.1e-49
Identity = 94/158 (59.49%), Postives = 124/158 (78.48%), Query Frame = 0 

Query: 2   VTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVEL 61
           +T+G KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++L
Sbjct: 54  LTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDL 113

Query: 62  YLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSS 121
           Y TN++CIK+LVGNKVD+ S+RAV+ +EG++ A+++  LFLECSA+TR NV++CF+EL  
Sbjct: 114 YSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL 173

Query: 122 KMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 160
           K++E PSL   GS   K+ I  +  A +    +   CC
Sbjct: 174 KILETPSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-34
Identity = 70/131 (53.44%), Postives = 94/131 (71.76%), Query Frame = 0 

Query: 2   VTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVEL 61
           + + G + KL IWDTAGQERF TLT SYYRGA G+ILVYDVT+R+TFT L N W  E+E 
Sbjct: 50  IAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELET 109

Query: 62  YLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSS 121
           Y T  + +K+LVGNK+D+  +R V   EG++ A+KH  LF+E SA+TR+ V   F+EL  
Sbjct: 110 YCTRNDLVKMLVGNKIDK-DNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVE 169

Query: 122 KMMEVPSLLEN 133
           K+++ P L E+
Sbjct: 170 KILQTPGLWES 178

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy Swiss-Prot
Match: Q54GY8 (Ras-related protein Rab-18 OS=Dictyostelium discoideum OX=44689 GN=rab18 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-34
Identity = 77/157 (49.04%), Postives = 101/157 (64.33%), Query Frame = 0 

Query: 2   VTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVEL 61
           V V GKK+ L IWDTAGQE+F  L SSYYRGAHGIIL YDVT+RE+F NL N W  EVE 
Sbjct: 48  VKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVEN 107

Query: 62  YLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSS 121
           +      +K+LVGNK+D+  +R VT EEG E AKK   LF+ECSA+++  + + F+EL+ 
Sbjct: 108 FANRSNLVKLLVGNKIDK-ENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQ 167

Query: 122 KMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGC 159
           K++E+P      S   KQ+     +   E + N   C
Sbjct: 168 KIIEIPQ--NTSSSQPKQRNTGSVKVEDEPDHNQGVC 200

[Close]
BLAST of Cucsat.G15014.T2 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 1.32e-110
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE
Sbjct: 56  MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS
Sbjct: 116 LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Sbjct: 176 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]
BLAST of Cucsat.G15014.T2 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 310 bits (795), Expect = 1.41e-105
Identity = 149/160 (93.12%), Postives = 159/160 (99.38%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVE
Sbjct: 56  MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           LYLTNRECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELS
Sbjct: 116 LYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SK++EVPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 176 SKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]
BLAST of Cucsat.G15014.T2 vs. NCBI nr
Match: TYJ99964.1 (ras-related protein RABC2a-like [Cucumis melo var. makuwa])

HSP 1 Score: 310 bits (795), Expect = 6.86e-105
Identity = 149/160 (93.12%), Postives = 159/160 (99.38%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVE
Sbjct: 102 MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVE 161

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           LYLTNRECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELS
Sbjct: 162 LYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELS 221

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SK++EVPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 222 SKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 261

[Close]
BLAST of Cucsat.G15014.T2 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 298 bits (762), Expect = 1.40e-100
Identity = 146/160 (91.25%), Postives = 156/160 (97.50%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE
Sbjct: 56  MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           +YLTNRECIKILVGNKVDRGS+RAVTTEEGMEVAK+HKSLFLECSARTRENVDRCF+ELS
Sbjct: 116 MYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SK++EVPSLLENGSVVVKQKILD T+ARKE   NDRGCCH
Sbjct: 176 SKILEVPSLLENGSVVVKQKILDNTRARKEA--NDRGCCH 213

[Close]
BLAST of Cucsat.G15014.T2 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288 bits (736), Expect = 1.28e-96
Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE
Sbjct: 56  MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           +YLTN ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELS
Sbjct: 116 MYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 159
           SK++EVPSLLENGSVVVKQKILDKT+ARKE   ND GCC
Sbjct: 176 SKILEVPSLLENGSVVVKQKILDKTRARKEA--NDGGCC 212

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 6.40e-111
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE
Sbjct: 56  MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS
Sbjct: 116 LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Sbjct: 176 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 6.84e-106
Identity = 149/160 (93.12%), Postives = 159/160 (99.38%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVE
Sbjct: 56  MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           LYLTNRECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELS
Sbjct: 116 LYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SK++EVPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 176 SKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy TrEMBL
Match: A0A5D3BLP5 (Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00050 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 3.32e-105
Identity = 149/160 (93.12%), Postives = 159/160 (99.38%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVE
Sbjct: 102 MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVE 161

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           LYLTNRECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELS
Sbjct: 162 LYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELS 221

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 160
           SK++EVPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 222 SKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 261

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 6.21e-97
Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE
Sbjct: 56  MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           +YLTN ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELS
Sbjct: 116 MYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 159
           SK++EVPSLLENGSVVVKQKILDKT+ARKE   ND GCC
Sbjct: 176 SKILEVPSLLENGSVVVKQKILDKTRARKEA--NDGGCC 212

[Close]
BLAST of Cucsat.G15014.T2 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 1.03e-95
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVE 60
           MVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+ VWAKEVE
Sbjct: 56  MVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVE 115

Query: 61  LYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELS 120
           +YLTN ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELS
Sbjct: 116 MYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELS 175

Query: 121 SKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 159
           SK++EVPSLLENGSVVVKQKILDKT+A KE   ND GCC
Sbjct: 176 SKILEVPSLLENGSVVVKQKILDKTRALKEA--NDGGCC 212

The following BLAST results are available for this feature:
BLAST of Cucsat.G15014.T2 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498411.2e-5667.92Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1[more]
Q9SF922.2e-5071.53Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1[more]
O236574.1e-4959.49Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1[more]
Q6DHC11.7e-3453.44Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1[more]
Q54GY82.2e-3449.04Ras-related protein Rab-18 OS=Dictyostelium discoideum OX=44689 GN=rab18 PE=3 SV... [more]
BLAST of Cucsat.G15014.T2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150373.11.32e-110100.00ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs... [more]
XP_008456546.11.41e-10593.13PREDICTED: ras-related protein RABC2a-like [Cucumis melo][more]
TYJ99964.16.86e-10593.13ras-related protein RABC2a-like [Cucumis melo var. makuwa][more]
XP_038885704.11.40e-10091.25ras-related protein RABC2a-like [Benincasa hispida][more]
XP_022952871.11.28e-9689.31ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related... [more]
BLAST of Cucsat.G15014.T2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN276.40e-111100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1[more]
A0A1S3C3K96.84e-10693.13ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=... [more]
A0A5D3BLP53.32e-10593.13Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1GLE86.21e-9789.31ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE... [more]
A0A6J1JMZ91.03e-9588.68ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 66..79
score: 42.24
coord: 101..123
score: 34.38
coord: 2..24
score: 50.88
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..126
e-value: 3.9E-10
score: 28.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..126
e-value: 6.1E-47
score: 171.9
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 1..159
NoneNo IPR availablePANTHERPTHR24073:SF643SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATEDcoord: 1..159
NoneNo IPR availablePROSITEPS51419RABcoord: 1..159
score: 23.580019
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 2..126
e-value: 3.1E-8
score: -13.0
IPR001806Small GTPasePFAMPF00071Rascoord: 2..124
e-value: 5.6E-38
score: 130.1
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..160
score: 14.01718
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..157
e-value: 1.8E-44
score: 153.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..159
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 2..119
e-value: 2.2E-19
score: 67.8

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G15014Cucsat.G15014gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15014.T2.E1Cucsat.G15014.T2.E1exon
Cucsat.G15014.T2.E2Cucsat.G15014.T2.E2exon
Cucsat.G15014.T2.E3Cucsat.G15014.T2.E3exon
Cucsat.G15014.T2.E4Cucsat.G15014.T2.E4exon
Cucsat.G15014.T2.E5Cucsat.G15014.T2.E5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15014.T2.C5Cucsat.G15014.T2.C5CDS
Cucsat.G15014.T2.C4Cucsat.G15014.T2.C4CDS
Cucsat.G15014.T2.C3Cucsat.G15014.T2.C3CDS
Cucsat.G15014.T2.C2Cucsat.G15014.T2.C2CDS
Cucsat.G15014.T2.C1Cucsat.G15014.T2.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G15014.T2Cucsat.G15014.T2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0012505 endomembrane system
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding