Cucsat.G14140.T9 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G14140.T9
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein MICROTUBULE BINDING PROTEIN 2C-like isoform X1
Location	ctg1869: 3146072 .. 3149435 (-)
RNA-Seq Expression	Cucsat.G14140.T9
Synteny	Cucsat.G14140.T9

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGACTTTCACGCTCTCAACCCTTTCATCGCTTTCCAATAAATACGGATTCCCAACGCACAATGCTTCTGCAGAATTAGGCCTCATGGATTTCCAATCCAAACCCAACGAATTGAAATCCCAATGCCCAAGATGCAATTCTCTCCACACCAAATTCTGCTATTACAATAACTACAACTACTCTCAGCCTCGCCATTTTTGCAAGACCTGCCGCCGCTACTGGACCCTCGGCGGTCTCCTCCGTAATATTCCCGTCGGCGGTGGAACCCGGAAATCGAAGAAGAATTCTAAAGCTAAACGTGCGACTTTCACTGATTCAGCGTGTAATTCGAACTCTGATTTGGATATGTTGTCCAGTCCGTTGAAGTTGAATAATCAAGCGGGGGATTTCCAGTGGAACGGAAGGGAATTTGAAGCTGGGGATCCGGCAGCGGAAGAGGGATTATTTGGATTAGATCAATTGCCGACGAGTTCCGGTGATAATAATGGAAGTTCGTGGTTGAATTTCTACGGATTAACGCATCCTTTTAACAATTGATGATTGATTAATTTAGACAACAAATGTATCTCTCTCTATTATTATTTTTATGCCATTAAGTTTCCGTTTTTTACTCTTGAATTTTGAAATGAAATTATGAGAATCAGTCTCTACTTTTAAGAGAATTGTTGTATAAATTTGAAATTGAAAAGATTGAAGAACACATAAATCAATCAATATATAAAATTGATTGATGAAATGAACATAAACATGGAAGGGTATTATGGTGGTTAATAGAAGTAAGGAAGGGTATTTTGGGGAAAAAAGATAGATTTGGCATTTACGTCGGTGACCCTAAAAGAAAAGGAATTTGAAATTTGGTCCCCAACGACTATCCAATTTCTTTTCTTTTCCTTCTTTTCTCATTTGCTTTCCTTTTTCGTTGAAGGAAGGAAGGAAGGAAGGAAGGAACGGAGGGAGGGAGGGTTTGGCTTTTCCTTTTCCCTTCAAAATTTCTCAAGATTTCATCTTTTTTAACAATGTTTGATCCCCAACATTTGTTACAAGACGATTCTGGTTTCGGCGACCAGAATTCATGGCTTTCCGGCGACCACAACTCCTCCCCAGCTCGACGTCTCTCTCACTCATCACTTGCCAACGCATCTATTTCAACTTCGTCAACTCCTGCTGCTGCTGCCGCCGCCGCCGCTAATGGGAATTTTGATCGTGAACTCTTCAACAATCTCGTCTCCATCGTTCCTCTTGTTCAGTCTCTTATTGTAATTCCTCTCTTTTTAACTATTTTAGATGCAAATGAATAATGGGGTTTTTCTTAATTCTGTTGTAGGGTACTAGAGGGGAAGGGTAGAGTGTCGTGAGTCTCGTGATCGAGGGAAATTTGATTTTGAAAACCGTACTATTTTTAGGTTTCTATAAATTCTACTCGTGGGATGGGAAAGGCTGGAGTTGTTTATTTTCAGAGATGGGAAATGGGGCGGAGTTGGGAAAGAAATTAATTCATCCATTGAATGTTTCTGTATTCGATGAAGGATTAATTGTTGAAAATGTAATTCAGTTCTGTTCTTTACTGATTTCTTCTCAAATTCGAAGTACTTCGTTCGATTTCTCTCTTTTCTGGGTTTCTTTTTATTTTTTTTTATTTTATCTTTGATGTTTTATTGATTATGGGTATTTGTTTTGGTTTTAGGATCGAAAAGCCAGTAGTTCCTTCACGAAGAGGGGTTCAATGATTTACACTAAGACACCTTCTAGAGACTCATTACACAGGAAAGTAAGTATTTTTCACTTATATACGATATGGCATTTCTTCATACATATATACTTCTCTTTGATTTAAAGAATTCAATGGATTGTATATAGCGGTTTGATTCCAAGGCAGGACAAGTTTACTGGATCGTTTCATGTTTGTGATGAATTCTGTTAATTTAAGTGAGTCCAATGAGCTTTGAGTTTCTATTTATTTTGTAGCCAATAGCCTAATGTCAGTTTGTTTTCTGGTGTGGTTGTCTCTAATTTTTTGTGCATTCCTTAATTGATGAATGCATTCCTTAATTGATGAATATTTTTACTCATGAAGATTGAACAGAAAGGTAAGAATAATGGTCAATCTATTCCAACCAAGAAGAAAAAAGATCATGGGGACAAAGAAGAGGGTCATAATGTTGATAATAACGGAGATGCCAATGGCTTTTCAATGTTCTCTTCAAGTTCTTTGGTCTCTGAAAAGGAGAAAGAAGAGCTAATCACATTGAGAGAACAAGTGGAAGATCTTCAAAAGAAATTACTTGAAAAGGAGGAGCTTTTAAAATCAGCAGAGATGTCGAAGGACCAGATGAACAATGTTTACTCAAAACTTGATGCTTTGAGTCTCCAGTCTGCTGAGAAGGATTCTATGATAAAATCTATTCATTCCCAGCTTTCAGATGCAAAGGTGTTCCTATAGCTACATTTTGTTTATTGAAATAATTTTCATTTGGACGGATTCTTTTTCCTAAATATATATAAATTTTCTCTCTTTCTTTTTCATCTGCAGATTAAGCTTGCAGATAAGCAAGCTGCCTTGGAGAAGATACAATGGGAGGTAACGACATCAAATACAAAAGTAGAAGAACTTCAAGAACAGCTCAAATCCTCGCAAGGGGATGTTTCATCGTTTATGCTGTTACTTGAAGGCTTGACAAAGAAAGATTGCAGTGATCGTCTCAAAGATTATAATCTTTCATTACATCTCCCTGAGAGCTGCCCTTCCATTGTGAGCACATTATTATATTCTCTTTTTATACATGCGTTTGTAGCAGTCTGTTTTTATGGTTCCCGTACGTTAATAAGATTAGCAATTCTTATTCTTTCTGTGTTCTAGCATATCACGTTGTTACTTTTTCAGAATATAACGTGGATTTAGGACTATTTACCTTTTATCGAGCAGGATGATTTGGATGATGTGGAAATGAAGAAAATGGAAGAAGCAAGACAAGCTTATGTAGCTGCTGTTGCTGCTGCAAAGGCAAAGCAAGATGAAGAATCTATTGCTGCTGCTGCAACTGCAAGATTACATCTTCAATCTTTCGTTTTCAGAACATAAGTTTCAAACATTCATCACTCAGCGTTAACATTTGCTTCCTTTGGCATTTCTTTCTGATTGTTACTACGGCCTGATACTATAGTGTTCTATGTAGGGTTGCCTGAGTTATTTATTGTAGTAATATATTCAAGAAATGCGAAAATTGGAACATTTGTTTCATTTTGTATGTATGATGTATGTAACTTCTCCATGTTCGTGTTTAATGAAAACGCGCCACCGTTGGTTGTGCGCTAGAGAGACATTTTGTTCCACAATTATTGAATACATCTCTCATTTTCCGATG

Coding sequence (CDS)

CTGACTTTCACGCTCTCAACCCTTTCATCGCTTTCCAATAAATACGGATTCCCAACGCACAATGCTTCTGCAGAATTAGGCCTCATGGATTTCCAATCCAAACCCAACGAATTGAAATCCCAATGCCCAAGATGCAATTCTCTCCACACCAAATTCTGCTATTACAATAACTACAACTACTCTCAGCCTCGCCATTTTTGCAAGACCTGCCGCCGCTACTGGACCCTCGGCGGTCTCCTCCGTAATATTCCCGTCGGCGGTGGAACCCGGAAATCGAAGAAGAATTCTAAAGCTAAACGTGCGACTTTCACTGATTCAGCGTGTAATTCGAACTCTGATTTGGATATGTTGTCCAGTCCGTTGAAGTTGAATAATCAAGCGGGGGATTTCCAGTGGAACGGAAGGGAATTTGAAGCTGGGGATCCGGCAGCGGAAGAGGGATTATTTGGATTAGATCAATTGCCGACGAGTTCCGGTGATAATAATGGAAGTTCGTGGTTGAATTTCTACGGATTAACGCATCCTTTTAACAATTGA

Protein sequence

LTFTLSTLSSLSNKYGFPTHNASAELGLMDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGGTRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGLFGLDQLPTSSGDNNGSSWLNFYGLTHPFNN

Homology

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-24
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 16  GFPTHNASAELGLMDFQSKPNELKS-QCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYW 75
           G P     A  G  + +++P + K+  CPRCNS +TKFCYYNNY+  QPR+FCKTCRRYW
Sbjct: 53  GAPPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYW 112

Query: 76  TLGGLLRNIPVGGGTRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNG 135
           T GG LRN+PVGGG+RK+K++S +  +    SA  +NS +   S  + + +  G    N 
Sbjct: 113 TEGGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNP 172

Query: 136 REFEAG 141
           +    G
Sbjct: 173 KLVHEG 178

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 8.6e-24
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 22  ASAELGLMDFQSK---PNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGG 81
           A A   LMD   +   P++   +CPRC S HTKFCYYNNY+ SQPR+FCKTCRRYWT GG
Sbjct: 52  AVAAAALMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGG 111

Query: 82  LLRNIPVGGGTRKSKKNSKAKRATFTDS 107
            LRNIPVGGG RK+KK S +  ++ T S
Sbjct: 112 TLRNIPVGGGCRKNKKPSSSNSSSSTSS 139

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-23
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 41  QCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGGTRKSKKNSKAKR 100
           +CPRCNSL+TKFCYYNNYN SQPRHFCK CRRYWT GG+LRN+PVGGG RK+K+ SK K+
Sbjct: 52  KCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKR-SKTKQ 111

Query: 101 ATFTDSA 108
              + SA
Sbjct: 112 VPSSSSA 117

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.3e-23
Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 35 PNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGGTRKSKK 94
          P + + +CPRC+S +TKFCYYNNYN SQPRHFCK CRRYWT GG LRNIPVGGGTRKS K
Sbjct: 28 PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87

Query: 95 NS 97
           S
Sbjct: 88 RS 89

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy Swiss-Prot
Match: Q9ZV33 (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 63/160 (39.38%), Postives = 86/160 (53.75%), Query Frame = 0


Query: 23  SAELGLMDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRN 82
           +AE   +   S+P E   +CPRC+S +TKFCY+NNYN +QPRHFCK CRRYWT GG LRN
Sbjct: 77  AAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRN 136

Query: 83  IPVGGGTRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDP 142
           +PVGGG R++KK       + + S    ++ +   +SP   +N                 
Sbjct: 137 VPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQN 196

Query: 143 AAEEGLFGLDQLPTSSGDNNG-----SSWLNFYGLTHPFN 178
             + G  GL+ L   +G+N G     SS+LN  G  H  N
Sbjct: 197 LTQLGGIGLN-LAAINGNNGGNGNTSSSFLNDLGFFHGGN 235

[Close]

BLAST of Cucsat.G14140.T9 vs. NCBI nr
Match: XP_004137607.1 (dof zinc finger protein DOF1.7 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 2.86e-111
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 29  MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 88
           MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG
Sbjct: 1   MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 60

Query: 89  TRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGL 148
           TRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGL
Sbjct: 61  TRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGL 120

Query: 149 FGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 178
           FGLDQLPTSSGDNNGSSWLNFYGLTHPFNN
Sbjct: 121 FGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 150

[Close]

BLAST of Cucsat.G14140.T9 vs. NCBI nr
Match: XP_008445935.1 (PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo] >TYJ98960.1 dof zinc finger protein DOF3.4-like [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (673), Expect = 1.30e-87
Identity = 131/155 (84.52%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 29  MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 88
           MD QSKP+ELK +CPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRN+PVGGG
Sbjct: 1   MDSQSKPDELKCRCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPVGGG 60

Query: 89  TRKSKKNSKAKRATFTDSACNSNS-----DLDMLSSPLKLNNQAGDFQWNGREFEAGDPA 148
           +RKSKKNSK KRATFTDSACNSNS     DLDM SSPLKLN Q+GD  WNGREFEAGDPA
Sbjct: 61  SRKSKKNSKPKRATFTDSACNSNSGVIGSDLDMRSSPLKLN-QSGDSPWNGREFEAGDPA 120

Query: 149 AEEGLFGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 178
           AEEG FGLD L TSSGD+ GSSWL FYGLTH FNN
Sbjct: 121 AEEG-FGLDHLATSSGDS-GSSWLKFYGLTHHFNN 152

[Close]

BLAST of Cucsat.G14140.T9 vs. NCBI nr
Match: KAG6584390.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019976.1 Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147 bits (372), Expect = 6.15e-42
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 24  AELGLMDFQ---SKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLL 83
           AELG MD Q   SKP     +CPRC+SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+L
Sbjct: 2   AELGHMDLQDIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVL 61

Query: 84  RNIPVGGGTRKSKKNSKAK-------RATFTDSACNSNSDLDMLSSPLKLNNQAGD-FQW 143
           RN+PVGGG RK+K +SK K       R + +  + +  SDL++L SPL LN QAGD + W
Sbjct: 62  RNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLNLN-QAGDWYGW 121

Query: 144 --NGREFEAGDPAAEEGLFGLDQLPTS 157
              GRE E G  A  EG   LD LPTS
Sbjct: 122 IETGREAEKG--ARGEGFGSLDHLPTS 141

[Close]

BLAST of Cucsat.G14140.T9 vs. NCBI nr
Match: XP_023520188.1 (dof zinc finger protein DOF3.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142 bits (357), Expect = 1.65e-39
Identity = 81/149 (54.36%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 24  AELGLMDFQ---SKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLL 83
           AELG MD Q   SKP     +CPRC+S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+L
Sbjct: 2   AELGHMDLQDIRSKP----WKCPRCDSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVL 61

Query: 84  RNIPVGGGTRKSKKNSKAK-------RATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWN 143
           RN+PVGGG RK+K +SK K       R + +  + +  SDL++L SPLKLN         
Sbjct: 62  RNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLKLNQ-------- 121

Query: 144 GREFEAGDPAAEEGLFG-----LDQLPTS 157
                 GDP AE+G  G     LD LPTS
Sbjct: 122 ------GDPPAEKGARGEGFGSLDHLPTS 132

[Close]

BLAST of Cucsat.G14140.T9 vs. NCBI nr
Match: XP_022924220.1 (dof zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 134 bits (338), Expect = 1.39e-36
Identity = 79/131 (60.31%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 25  ELGLMDFQ---SKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLR 84
           ELG MD Q   SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LR
Sbjct: 3   ELGHMDLQDIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLR 62

Query: 85  NIPVGGGTRKSKKNSKAK---RATFT-----DSACNS-NSDLDMLSSPLKLNNQAGD-FQ 140
           N+PVGGG RK+K + K K   RA         S  NS  SDL++L SPL+LN QAGD + 
Sbjct: 63  NVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRLN-QAGDWYG 122

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy TrEMBL
Match: A0A0A0LTJ9 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039960 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.38e-111
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 29  MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 88
           MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG
Sbjct: 1   MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 60

Query: 89  TRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGL 148
           TRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGL
Sbjct: 61  TRKSKKNSKAKRATFTDSACNSNSDLDMLSSPLKLNNQAGDFQWNGREFEAGDPAAEEGL 120

Query: 149 FGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 178
           FGLDQLPTSSGDNNGSSWLNFYGLTHPFNN
Sbjct: 121 FGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 150

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy TrEMBL
Match: A0A5D3BGN5 (Dof zinc finger protein DOF3.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001620 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 6.30e-88
Identity = 131/155 (84.52%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 29  MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 88
           MD QSKP+ELK +CPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRN+PVGGG
Sbjct: 1   MDSQSKPDELKCRCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPVGGG 60

Query: 89  TRKSKKNSKAKRATFTDSACNSNS-----DLDMLSSPLKLNNQAGDFQWNGREFEAGDPA 148
           +RKSKKNSK KRATFTDSACNSNS     DLDM SSPLKLN Q+GD  WNGREFEAGDPA
Sbjct: 61  SRKSKKNSKPKRATFTDSACNSNSGVIGSDLDMRSSPLKLN-QSGDSPWNGREFEAGDPA 120

Query: 149 AEEGLFGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 178
           AEEG FGLD L TSSGD+ GSSWL FYGLTH FNN
Sbjct: 121 AEEG-FGLDHLATSSGDS-GSSWLKFYGLTHHFNN 152

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy TrEMBL
Match: A0A1S3BDV3 (dof zinc finger protein DOF3.4-like OS=Cucumis melo OX=3656 GN=LOC103488810 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 6.30e-88
Identity = 131/155 (84.52%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 29  MDFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGG 88
           MD QSKP+ELK +CPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRN+PVGGG
Sbjct: 1   MDSQSKPDELKCRCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPVGGG 60

Query: 89  TRKSKKNSKAKRATFTDSACNSNS-----DLDMLSSPLKLNNQAGDFQWNGREFEAGDPA 148
           +RKSKKNSK KRATFTDSACNSNS     DLDM SSPLKLN Q+GD  WNGREFEAGDPA
Sbjct: 61  SRKSKKNSKPKRATFTDSACNSNSGVIGSDLDMRSSPLKLN-QSGDSPWNGREFEAGDPA 120

Query: 149 AEEGLFGLDQLPTSSGDNNGSSWLNFYGLTHPFNN 178
           AEEG FGLD L TSSGD+ GSSWL FYGLTH FNN
Sbjct: 121 AEEG-FGLDHLATSSGDS-GSSWLKFYGLTHHFNN 152

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy TrEMBL
Match: A0A6J1EE71 (dof zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431732 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 6.74e-37
Identity = 79/131 (60.31%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 25  ELGLMDFQ---SKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLR 84
           ELG MD Q   SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LR
Sbjct: 3   ELGHMDLQDIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLR 62

Query: 85  NIPVGGGTRKSKKNSKAK---RATFT-----DSACNS-NSDLDMLSSPLKLNNQAGD-FQ 140
           N+PVGGG RK+K + K K   RA         S  NS  SDL++L SPL+LN QAGD + 
Sbjct: 63  NVPVGGGNRKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRLN-QAGDWYG 122

[Close]

BLAST of Cucsat.G14140.T9 vs. ExPASy TrEMBL
Match: A0A6J1C7U6 (dof zinc finger protein DOF5.8-like OS=Momordica charantia OX=3673 GN=LOC111008785 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 8.30e-32
Identity = 83/179 (46.37%), Postives = 98/179 (54.75%), Query Frame = 0


Query: 38  LKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGGTRKSKKNS- 97
           +K  CPRC+SL TKFCYYNNYNYSQPRH CKTCRRYWT+GG LRNIPVGG TRKS  +  
Sbjct: 19  VKCPCPRCHSLDTKFCYYNNYNYSQPRHLCKTCRRYWTIGGTLRNIPVGGATRKSNNSKL 78

Query: 98  KAKRATFT---DSACNSNSDLDM-----LSSPLKLNNQ-AGDF----QWNGREFEAG--D 157
           K K A      +SA N+   L       L++P KL+ + A D+    Q  GR    G  D
Sbjct: 79  KPKPAAIVGSKNSAANATGALSDESRSDLTTPFKLSEEVAADYYGWIQSQGRGIAVGPAD 138

Query: 158 PAAE------EGLFGLDQLPTSSGD---NNG-------------SSWLNFYGLTHPFNN 178
           P A+      EG   LD   +S GD   N G             +SW    GLT PF+N
Sbjct: 139 PTAQKRGRTGEGFGSLDL--SSGGDQIQNEGMLEICSGAMEMDEASWFEHCGLTTPFDN 195

The following BLAST results are available for this feature:

BLAST of Cucsat.G14140.T9 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXG8	3.9e-24	44.44	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q9FM03	8.6e-24	60.23	Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV...	[more]
Q8LDR0	1.5e-23	73.13	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
O82155	4.3e-23	75.81	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q9ZV33	7.3e-23	39.38	Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV...	[more]

BLAST of Cucsat.G14140.T9 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137607.1	2.86e-111	100.00	dof zinc finger protein DOF1.7 [Cucumis sativus]	[more]
XP_008445935.1	1.30e-87	84.52	PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo] >TYJ98960.1 dof zi...	[more]
KAG6584390.1	6.15e-42	58.50	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_023520188.1	1.65e-39	54.36	dof zinc finger protein DOF3.1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924220.1	1.39e-36	60.31	dof zinc finger protein 4-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G14140.T9 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTJ9	1.38e-111	100.00	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039960 PE...	[more]
A0A5D3BGN5	6.30e-88	84.52	Dof zinc finger protein DOF3.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BDV3	6.30e-88	84.52	dof zinc finger protein DOF3.4-like OS=Cucumis melo OX=3656 GN=LOC103488810 PE=4...	[more]
A0A6J1EE71	6.74e-37	60.31	dof zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431732 PE=...	[more]
A0A6J1C7U6	8.30e-32	46.37	dof zinc finger protein DOF5.8-like OS=Momordica charantia OX=3673 GN=LOC1110087...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 40..94 e-value: 1.4E-31 score: 108.4
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 42..78
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 40..94 score: 27.940741
None	No IPR available	PANTHER	PTHR31992:SF203	DOF ZINC FINGER PROTEIN DOF3.4-LIKE	coord: 33..112
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 33..112

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G14140	Cucsat.G14140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14140.T9.E1	Cucsat.G14140.T9.E1	exon
Cucsat.G14140.T9.E2	Cucsat.G14140.T9.E2	exon
Cucsat.G14140.T9.E3	Cucsat.G14140.T9.E3	exon
Cucsat.G14140.T9.E4	Cucsat.G14140.T9.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14140.T9.C1	Cucsat.G14140.T9.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14140.T9	Cucsat.G14140.T9-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:0048731	system development
biological_process	GO:0009888	tissue development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008017	microtubule binding