Cucsat.G13572.T13 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13572.T13
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	fibroin heavy chain-like isoform X47
Location	ctg1838: 9362828 .. 9364930 (+)
RNA-Seq Expression	Cucsat.G13572.T13
Synteny	Cucsat.G13572.T13

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTTGCATGTGCCTCAACCACTCTCTACCATAACTTGCACTTTTTACTCCCCATCTTTTCCTTATATATATATATATATAGCCTTTAGTCCCCTTTCATTTCACTTCAACCATTCACAAATGGCTTCTCATAAGTTTTCTTCTTTTGTATTGTTCTTTCTTTTGTTAGGTATTGGGGTTTCATATGCAGCTAGAACTCTCTTAACTTATGGTGGAGGACCAGTGAATATACCTGCATTTGCTTATGGTGCAGGCAATGGTGGAGGTGGTGGAAGCGGTGGTGGATATGGTCCACTTGGTGGTGGTGGTGGAGGTTATGGAAGTGGAGGTGGTGGTAGTTATAGTTCTGTAGGAGTACAATATGGTGTTGGAGGCTATGGAAGTGGAGGTGGAGGTGGAAGTGGTGGTGGTGAAGGATACGGTCCTAGTGGTGGCTATGGTGGAGGAGGAGGTGGTGGGAGTGGCGGTGGTTCTGCTTATGGTCATGGTGGTTCTGCTTATGGAGGTGGTGGAGGAAGTGGCGGAGGAGGTGGTTATGGTCCTGGTGGTGGTGGATATGGAGGGGGTGGTGGAAATGGTGGTGGAGCGAGTTATGGTCCTGGAGAAGGTAGTGGATATGGAGGTGTAGGATATGGTGGAGGTGGTGGTAGTGGAGGTGGTGTGGGGTATGGCCCGGGAGGTGGAGGGTATGGAGGAGGTGGTGGGAATGGAGGTGGGGCTGGATATGGTCTTGGGGGTGCAGGATATGGAGGAGGTGGTGGAAATGGCGGTGGGGCAGGATATGGTCATGAAGGTGCAGGTTATGGAGGGGGTGGTGGAAATGGCGGTGGAGGAGGATATGGCCATGAAGGTGCAGGGTATGGAGGGGGTGGTGGAAATGGCGGTGGAGGAGGATACGGTCATGAAAGTGGAGGATATGGAGGTAATGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATATGGAGGCAGTGGTCATGAAAGTGGAGGATATGGAGGTAGTGGAGGAAATAACGGCGGTCATGAAAGTGGAGGATACGGAGGCAGTGGAGGAAATGGAGGAAATGGCGGCAGTCATGAAAGTGGAGGATATGGAGGCAGTGGAGGAAATGGAGGTGGTCATGAAAGTGGAGGATACGGAGGCAGCGGAGGAAATGGTGGCGGTCATGAAAGTGGAGGATATGGAGGCAGTGGAGGAAATAGTGGTGGTCATGAAAGTGGAGGATATGGAGGAAGTGAAGGACATGGCGGTGGTCATGAAAGTGGAGGATACGGAGGCAGTGGAGGAAATGGTGGCGGTCATGAAAGTGGAGGATATGGAGGTAGTGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATATGGAGGCGGCAGTCATGAAAGTGGAGGATACGGAGGCAATGGAGGAAATGGCGGCGGTCATGAAAGTGGAGGATATGGAAACAGTGGAGGAAATAGCGGTGGTCATGAAAGTGGAGGATATGGAGGCAGTGGTGGAAATAGCGGTGGGGCAGGATATGGTGGAGAACATGGAGCAGGGTATGGTGGTGGTGGTGGAAATGGTGGGGGTGGAGGTGGAGGAGCAGGAAGTGGCTCAGGAGGAGAATATGGCTCTGGTTATGGAAGCGGAGCAGGTGGGGGACATGGTGCAGGAGGAGGAAATAATGGTGGGGGAAGCGGAGGAGGGGGTGGAGGAGGATCAGGATATGGTGGAGGAAGTGCACATGGTGGTGCATACGGTGGACATGAAGAAGGCAATGGGTATGGTGGAGGAGGTGGTAGCGGGCAAGGTGGTGGACATGGTGGATATGCACCTTGAAATGGACATCATAAATGTTACCTTATATATATATATATTTATACTATATACAATTATAAAAGAAACAAATAGGGAAAATACATATTATCATTTATCCTTTCTTAATTCCCTATGTAATCAAAATATATTTACGTGTATCAAAGATTGGGCAAAGGGATTAGTTATATGTAGTAAGAAAAGTGTGTGATATATATGTCAAAATGGGAACACTTGCCAAGTTGTAACTTCTTCATCTCTATATTTTGTTGAAGTAAAAGATTAAGGGGACTCTCCTATTTTTGA

Coding sequence (CDS)

CCCTTCTTGCATGTGCCTCAACCACTCTCTACCATAACTTGCACTTTTTACTCCCCATCTTTTCCTTATATATATATATATATAGCCTTTAGTCCCCTTTCATTTCACTTCAACCATTCACAAATGGCTTCTCATAAGTTTTCTTCTTTTGTATTGTTCTTTCTTTTGTTAGGTATTGGGGTTTCATATGCAGCTAGAACTCTCTTAACTTATGGTGGAGGACCAGTGAATATACCTGCATTTGCTTATGGTGCAGGCAATGGTGGAGGTGGTGGAAGCGGTGGTGGATATGGTCCACTTGGTGGTGGTGGTGGAGGTTATGGAAGTGGAGGTGGTGGTAGTTATAGTTCTGTAGGAGTACAATATGGTGTTGGAGGCTATGGAAGTGGAGGTGGAGGTGGAAGTGGTGGTGGTGAAGGATACGGTCCTAGTGGTGGCTATGGTGGAGGAGGAGGTGGTGGGAGTGGCGGTGGTTCTGCTTATGGTCATGGTGGTTCTGCTTATGGAGGTGGTGGAGGAAGTGGCGGAGGAGGTGGTTATGGTCCTGGTGGTGGTGGATATGGAGGGGGTGGTGGAAATGGTGGTGGAGCGAGTTATGGTCCTGGAGAAGGTAGTGGATATGGAGGAGGATACGGTCATGAAAGTGGAGGATATGGAGGTAATGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATATGGAGGCAGTGGTGGAAATAGCGGTGGGGCAGGATATGGTGGAGAACATGGAGCAGGGTATGGTGGTGGTGGTGGAAATGGTGGGGGTGGAGGTGGAGGAGCAGGAAGTGGCTCAGGAGGAGAATATGGCTCTGGTTATGGAAGCGGAGCAGGTGGGGGACATGGTGCAGGAGGAGGAAATAATGGTGGGGGAAGCGGAGGAGGGGGTGGAGGAGGATCAGGATATGGTGGAGGAAGTGCACATGGTGGTGCATACGGTGGACATGAAGAAGGCAATGGGTATGGTGGAGGAGGTGGTAGCGGGCAAGGTGGTGGACATGGTGGATATGCACCTTGA

Protein sequence

PFLHVPQPLSTITCTFYSPSFPYIYIYIAFSPLSFHFNHSQMASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLGGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAYGHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGGYGHESGGYGGNGGNGGGHESGGYGGSGGNSGGAGYGGEHGAGYGGGGGNGGGGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGGAYGGHEEGNGYGGGGGSGQGGGHGGYAP

Homology

[Close]

BLAST of Cucsat.G13572.T13 vs. NCBI nr
Match: XP_031738895.1 (glycine-rich cell wall structural protein 1 isoform X4 [Cucumis sativus])

HSP 1 Score: 322 bits (826), Expect = 6.21e-104
Identity = 303/445 (68.09%), Postives = 303/445 (68.09%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 101
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 102 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 161
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 162 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG------------ 221
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG            
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 282 -----------------GYGHESGGYGGNGGNGGGHESGGYGGSG--------------- 341
                            GYGHESGGYGGNGGNGGGHESGGYGGSG               
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGHESGGYGGSGGGSHE 300

Query: 342 --------------------------------------GNSGGAGYGGEHGAGYGGGGGN 344
                                                 GNSGGAGYGGEHGAGYGGGGGN
Sbjct: 301 SGGYGGNGGNGGGHESGGYGNSGGNSGGHESGGYGGSGGNSGGAGYGGEHGAGYGGGGGN 360

[Close]

BLAST of Cucsat.G13572.T13 vs. NCBI nr
Match: XP_016903578.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo])

HSP 1 Score: 287 bits (734), Expect = 3.62e-92
Identity = 270/306 (88.24%), Postives = 275/306 (89.87%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYG-GGPVNIPAFAYGAGNGGGGGSGGGYGPL 101
           MASH+ SSFVLFFLLLGIGVSYAARTLLTY  GG VNIPAFAYGAGNGGGGGSGGGYGPL
Sbjct: 1   MASHEVSSFVLFFLLLGIGVSYAARTLLTYSDGGQVNIPAFAYGAGNGGGGGSGGGYGPL 60

Query: 102 GGGGGG-YGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGS 161
           GGGGGG +G GGGGSYSS+G QYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGG+GGGS
Sbjct: 61  GGGGGGGFGGGGGGSYSSIG-QYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGNGGGS 120

Query: 162 AYGHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG-GYGHESGGY 221
           AYGHGGSAYG GGGSGGGGGYGPGGGGYGGGGGNGGG      E  GYGG G GHESGGY
Sbjct: 121 AYGHGGSAYGVGGGSGGGGGYGPGGGGYGGGGGNGGGH-----ESGGYGGNGGGHESGGY 180

Query: 222 GGNGGNGGGHESGGYGGSGGNSGGAGYGGEHGAGYGGGGGNGGGGGGGAGSGSGGEYGSG 281
           GG+GG   GHESGGYG  GGN GGAGYGGEHGAGYGGGGGNGGGGG  AGSGSGGEYGSG
Sbjct: 181 GGSGG---GHESGGYGSGGGNGGGAGYGGEHGAGYGGGGGNGGGGG--AGSGSGGEYGSG 240

Query: 282 YGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGGAYGGHEEGNGYGGGGGSGQGGG 341
           YGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGG    HE GNGYGGGGGSGQGGG
Sbjct: 241 YGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGG----HEGGNGYGGGGGSGQGGG 291

Query: 342 HGGYAP 344
           HGGYAP
Sbjct: 301 HGGYAP 291

[Close]

BLAST of Cucsat.G13572.T13 vs. NCBI nr
Match: XP_031738894.1 (glycine-rich cell wall structural protein 1.8 isoform X3 [Cucumis sativus])

HSP 1 Score: 281 bits (718), Expect = 2.13e-86
Identity = 303/553 (54.79%), Postives = 303/553 (54.79%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 101
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 102 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 161
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 162 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG------------ 221
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG            
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 282 -----------------GYGHESGGYGGNGGNGGGHESGGYGGSG--------------- 341
                            GYGHESGGYGGNGGNGGGHESGGYGGSG               
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGHESGGYGGSGGNNGG 300

Query: 342 ------------------------------------------------------------ 344
                                                                       
Sbjct: 301 HESGGYGGSGGNGGNGGSHESGGYGGSGGNGGGHESGGYGGSGGNGGGHESGGYGGSGGN 360

[Close]

BLAST of Cucsat.G13572.T13 vs. NCBI nr
Match: XP_031738893.1 (glycine-rich cell wall structural protein 1.8 isoform X2 [Cucumis sativus])

HSP 1 Score: 280 bits (716), Expect = 4.46e-86
Identity = 303/555 (54.59%), Postives = 303/555 (54.59%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 101
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 102 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 161
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 162 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG------------ 221
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG            
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 282 -----------------GYGHESGGYGGNGGNGGGHESGGYGGSGGN------------- 341
                            GYGHESGGYGGNGGNGGGHESGGYGGSGGN             
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGNNGGHESGGYGGSG 300

Query: 342 ------------------------------------------------------------ 344
                                                                       
Sbjct: 301 GNGGNGGSHESGGYGGSGGNGGGHESGGYGGSGGNGGGHESGGYGGSGGNSGGHESGGYG 360

[Close]

BLAST of Cucsat.G13572.T13 vs. NCBI nr
Match: XP_031738892.1 (glycine-rich cell wall structural protein 1.8 isoform X1 [Cucumis sativus] >KAE8651439.1 hypothetical protein Csa_001535 [Cucumis sativus])

HSP 1 Score: 276 bits (706), Expect = 1.78e-84
Identity = 303/565 (53.63%), Postives = 303/565 (53.63%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 101
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 102 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 161
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 162 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG------------ 221
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG            
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 282 -----------------GYGHESGGYGGNGGNGGGHESGGYGGSG--------------- 341
                            GYGHESGGYGGNGGNGGGHESGGYGGSG               
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGHESGGYGGSGGNNGG 300

Query: 342 ------------------------------------------------------------ 344
                                                                       
Sbjct: 301 HESGGYGGSGGNGGNGGSHESGGYGGSGGNGGGHESGGYGGSGGNGGGHESGGYGGSGGN 360

[Close]

BLAST of Cucsat.G13572.T13 vs. ExPASy TrEMBL
Match: A0A0A0LH77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902220 PE=4 SV=1)

HSP 1 Score: 342 bits (876), Expect = 1.49e-112
Identity = 301/390 (77.18%), Postives = 301/390 (77.18%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 101
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 102 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 161
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 162 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG------------ 221
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG            
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGASY 240

Query: 282 ---------------GYGHESGGYGGNGGNGGGHESGGYGGSGGNSGGAGYGGEHGAGYG 341
                          G GHESGGYGGNGGNGG HESGGYGGSGGNSGGAGYGGEHGAGYG
Sbjct: 241 GPGEGSGYGGVGGGNGGGHESGGYGGNGGNGGSHESGGYGGSGGNSGGAGYGGEHGAGYG 300

Query: 342 GGGGNGGGGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAH 344
           GGGGNGGGGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAH
Sbjct: 301 GGGGNGGGGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAH 360

[Close]

BLAST of Cucsat.G13572.T13 vs. ExPASy TrEMBL
Match: A0A1S4E5S4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103503549 PE=4 SV=1)

HSP 1 Score: 287 bits (734), Expect = 1.75e-92
Identity = 270/306 (88.24%), Postives = 275/306 (89.87%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYG-GGPVNIPAFAYGAGNGGGGGSGGGYGPL 101
           MASH+ SSFVLFFLLLGIGVSYAARTLLTY  GG VNIPAFAYGAGNGGGGGSGGGYGPL
Sbjct: 1   MASHEVSSFVLFFLLLGIGVSYAARTLLTYSDGGQVNIPAFAYGAGNGGGGGSGGGYGPL 60

Query: 102 GGGGGG-YGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGS 161
           GGGGGG +G GGGGSYSS+G QYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGG+GGGS
Sbjct: 61  GGGGGGGFGGGGGGSYSSIG-QYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGNGGGS 120

Query: 162 AYGHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG-GYGHESGGY 221
           AYGHGGSAYG GGGSGGGGGYGPGGGGYGGGGGNGGG      E  GYGG G GHESGGY
Sbjct: 121 AYGHGGSAYGVGGGSGGGGGYGPGGGGYGGGGGNGGGH-----ESGGYGGNGGGHESGGY 180

Query: 222 GGNGGNGGGHESGGYGGSGGNSGGAGYGGEHGAGYGGGGGNGGGGGGGAGSGSGGEYGSG 281
           GG+GG   GHESGGYG  GGN GGAGYGGEHGAGYGGGGGNGGGGG  AGSGSGGEYGSG
Sbjct: 181 GGSGG---GHESGGYGSGGGNGGGAGYGGEHGAGYGGGGGNGGGGG--AGSGSGGEYGSG 240

Query: 282 YGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGGAYGGHEEGNGYGGGGGSGQGGG 341
           YGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGG    HE GNGYGGGGGSGQGGG
Sbjct: 241 YGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGG----HEGGNGYGGGGGSGQGGG 291

Query: 342 HGGYAP 344
           HGGYAP
Sbjct: 301 HGGYAP 291

[Close]

BLAST of Cucsat.G13572.T13 vs. ExPASy TrEMBL
Match: A0A6J1DQA8 (glycine-rich cell wall structural protein 1.8 OS=Momordica charantia OX=3673 GN=LOC111023333 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 4.13e-44
Identity = 226/326 (69.33%), Postives = 242/326 (74.23%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG--PVNIPAFAYGAGNGGGGGSGGGYGP 101
           MAS K  S V FFLLLGIGVS AAR LL YGGG  P  +P F YG G+GGGGGSGGGYG 
Sbjct: 1   MASQKLPSLV-FFLLLGIGVSSAARALLNYGGGEQPGYVPPFGYGVGHGGGGGSGGGYGA 60

Query: 102 LGG--GGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGG--GGGGS 161
           LGG  GGGGYG GGGGSY SVG +YG GGYG  GGGGSGGGEGYGP+GG G G  GGGGS
Sbjct: 61  LGGYGGGGGYGGGGGGSYGSVG-EYGAGGYG--GGGGSGGGEGYGPAGGRGAGYGGGGGS 120

Query: 162 GGGSAYGHGGSAYGGGGGSGGGGGYG-PGGGGYGGGGGNGGGASYGPGEGSGYGGG---- 221
           GGG+ YG GG  YGGGGG+GGG GYG  GG GYGGGGG+GGGA+YG G G+GYGGG    
Sbjct: 121 GGGAGYGPGGG-YGGGGGNGGGAGYGGAGGAGYGGGGGSGGGAAYG-GPGAGYGGGGGSG 180

Query: 222 ----YGHESGGYGGNGGNGGGHESGG-----YGGSGGNSGGAGYGGEHGAGYGGGGGNGG 281
               YG    GYGG GGNGGG   GG     YGG GG+ GG GYGG  GAGYGGGGG+GG
Sbjct: 181 GGAGYGGPGAGYGGGGGNGGGAGYGGASGAGYGGGGGSGGGVGYGGPGGAGYGGGGGSGG 240

Query: 282 GGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGG--SAHGGAYG 341
           GGG  AG G GGE+G GYGSGAGGGHG GG +        GGGGSGYGGG  +AHGGAYG
Sbjct: 241 GGG--AGYGPGGEHGGGYGSGAGGGHGGGGSS--------GGGGSGYGGGGATAHGGAYG 300

Query: 342 G-HEEGNGYGGGGGSGQGGGHGGYAP 344
           G HE G+GYGGGGGSG+G GHGGYAP
Sbjct: 301 GGHEGGSGYGGGGGSGEGSGHGGYAP 310

[Close]

BLAST of Cucsat.G13572.T13 vs. ExPASy TrEMBL
Match: A0A6J1HV81 (glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 9.20e-40
Identity = 216/323 (66.87%), Postives = 224/323 (69.35%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG-PVNIPAFAYGAGNGGGGGSGGGYGPL 101
           MASHK  S  +FFLLLGIGVS AAR LLTYG G PVNIPAFAYGAG G G GSGGGYG L
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 102 GGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSA 161
           GG GGG G+GGG  Y SVG +YGVGGYGSGGGGGSG G GYGP GG G GGGGGSGGG  
Sbjct: 61  GGYGGGGGNGGGSGYGSVG-EYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGG 120

Query: 162 YGHG-----------GSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG 221
           YG G           GS YGGG  SGGG GYGPGGGGYGGGGGNGGGA YGPG GSGYGG
Sbjct: 121 YGSGVRYGEVGYGSGGSGYGGG--SGGGAGYGPGGGGYGGGGGNGGGAGYGPG-GSGYGG 180

Query: 222 G--------YGHESGGYGGNGGNGGG----HESGGYGGSGGNSGGAGYGGEHGAGYGGGG 281
           G        YGHE GGYGG GGNGGG    HE GGYGG GGN GGAGYG E G GYGGGG
Sbjct: 181 GGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGG 240

Query: 282 GNGGGGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGGA 340
           GNGGG      +G G E G GYG G G G GAG G+ GG          GYGGG  +GG 
Sbjct: 241 GNGGG------AGYGHEGGGGYGGGGGNGGGAGYGHEGG----------GYGGGGGNGGG 300

[Close]

BLAST of Cucsat.G13572.T13 vs. ExPASy TrEMBL
Match: A0A6J1HR00 (PE-PGRS family protein PE_PGRS16-like isoform X49 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 9.60e-40
Identity = 216/323 (66.87%), Postives = 224/323 (69.35%), Query Frame = 0


Query: 42  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG-PVNIPAFAYGAGNGGGGGSGGGYGPL 101
           MASHK  S  +FFLLLGIGVS AAR LLTYG G PVNIPAFAYGAG G G GSGGGYG L
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 102 GGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSA 161
           GG GGG G+GGG  Y SVG +YGVGGYGSGGGGGSG G GYGP GG G GGGGGSGGG  
Sbjct: 61  GGYGGGGGNGGGSGYGSVG-EYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGG 120

Query: 162 YGHG-----------GSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG 221
           YG G           GS YGGG  SGGG GYGPGGGGYGGGGGNGGGA YGPG GSGYGG
Sbjct: 121 YGSGVRYGEVGYGSGGSGYGGG--SGGGAGYGPGGGGYGGGGGNGGGAGYGPG-GSGYGG 180

Query: 222 G--------YGHESGGYGGNGGNGGG----HESGGYGGSGGNSGGAGYGGEHGAGYGGGG 281
           G        YGHE GGYGG GGNGGG    HE GGYGG GGN GGAGYG E G GYGGGG
Sbjct: 181 GGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGGYGGGG 240

Query: 282 GNGGGGGGGAGSGSGGEYGSGYGSGAGGGHGAGGGNNGGGSGGGGGGGSGYGGGSAHGGA 340
           GNGGG      +G G E G GYG G G G GAG G+ GG          GYGGG  +GG 
Sbjct: 241 GNGGG------AGYGHEGGGGYGGGGGNGGGAGYGHEGG----------GYGGGGGNGGG 300

The following BLAST results are available for this feature:

BLAST of Cucsat.G13572.T13 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13572.T13 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738895.1	6.21e-104	68.09	glycine-rich cell wall structural protein 1 isoform X4 [Cucumis sativus]	[more]
XP_016903578.1	3.62e-92	88.24	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo]	[more]
XP_031738894.1	2.13e-86	54.79	glycine-rich cell wall structural protein 1.8 isoform X3 [Cucumis sativus]	[more]
XP_031738893.1	4.46e-86	54.59	glycine-rich cell wall structural protein 1.8 isoform X2 [Cucumis sativus]	[more]
XP_031738892.1	1.78e-84	53.63	glycine-rich cell wall structural protein 1.8 isoform X1 [Cucumis sativus] >KAE8...	[more]

BLAST of Cucsat.G13572.T13 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH77	1.49e-112	77.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902220 PE=4 SV=1	[more]
A0A1S4E5S4	1.75e-92	88.24	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1DQA8	4.13e-44	69.33	glycine-rich cell wall structural protein 1.8 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1HV81	9.20e-40	66.87	glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita maxi...	[more]
A0A6J1HR00	9.60e-40	66.87	PE-PGRS family protein PE_PGRS16-like isoform X49 OS=Cucurbita maxima OX=3661 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 149..164 score: 52.34 coord: 215..233 score: 47.37 coord: 46..62 score: 25.0 coord: 180..190 score: 52.27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..344

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13572	Cucsat.G13572	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13572.T13.E1	Cucsat.G13572.T13.E1	exon
Cucsat.G13572.T13.E2	Cucsat.G13572.T13.E2	exon
Cucsat.G13572.T13.E3	Cucsat.G13572.T13.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13572.T13.C1	Cucsat.G13572.T13.C1	CDS
Cucsat.G13572.T13.C2	Cucsat.G13572.T13.C2	CDS
Cucsat.G13572.T13.C3	Cucsat.G13572.T13.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13572.T13	Cucsat.G13572.T13-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding