
Cucsat.G13395.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAGCCACACTCGAACTCCTGACGAACCACCGTGTGGACCAGCTCCAATACATAAGAGCATTTGAGGTCGAGACATGGATGAAGGAACTTTATGAGTTATGGAGGCTCAATAACAAAGGTGAAAAAGTGGTGGTGGAAATGAAAAAGAGATTGGCAGATGTAACGCTGAATACAATGTTCAAGATGGTGATTGGGAAGAAATTTTCCTCTACGGAGTATGGTAATGAAAAGTTTCAAAAGGTGTTGATAGAGTTCTTTGGATTGTTTGGTATATTTATTCTATCGGATTCGTTTCCATTTCTGAGTTGGTTGGACTTGGGAGGACATAAGAAAGTCATGAAGAAGACAGCCAAAATAATAGATGAGGTGTTTGATAAATTCCTCAAAGAGCATCGGGAGAGGATAAATAATTTTGGTGAACTACCGGTGGCGGAAAAGGACTTCATGGATGTTATGATTTCTACAGTTGAAGACGATGGACAACATTTCAATTGCCATGTTGATACTGTTATTAAAGCTACATGCTTGGTAAGCAAAATATATTAGGGTATGCAAGTCTGTCTTATAGATTATAATTGCTATTTGCTAATAATGGAAGTCTATTAACAATAGTCTTAATTCTATCAACTTTATACCATTATCACCAACACAATTATATTATCGTGCTATATTTCACATTTTAGATTTAATTAGCTTTAAAATTGTTGTTATGGATTTAATTAGAAACATTTTTAAATAATGTAAAATGAATGGAAATATTTGTAAAATATAGCGAAATTTTCGATTTTCAGTTATATTAGGTAAATATTTTCAACCATTTTCGATTTAGACTTTTAAAATTAAAACTTAGGAAGTTTGTGTGATTACAGTAGCTTAGAAATTTTAACGTTAATTTTATATCTATGATTTTGTAACAAAAGGGGCTTAAAGTATGAAGAAATTCAACGTAGATTTATGAGTATTAGTTTGCAATGTTGAATGTTGAGATCTAGACTATTTGGTTTTTCAAAAAAGTATACATTTCATTTGTAAAATGACATATTTAGTTATGATATTAATAAATTTGGTATGATTCATTTTAACGCAGAATATGATATTAGGTGGATTTGACACAACAACAGTTACAATGACATGGGCTCTTTGTTTACTTCTCAACAATAAAGAAGCACTCAAGAAGGCTCAAGTTGAATTAGATGAACAAGTTGGGAGAGAAAGACAAGTGAAAGAGACGGATTTGAAAAATCTACCCTATCTCCAAGCTATTGTTAAGGAAACTCTACGATTGTATCCTGCTGCACCACTGTTAGTCCCTCATGAATCTATAGAAGATTGCACAGTTGCTGGCTATCACATACCGAAAGGAACACGCCTCATAGTTAATGTTCAAAAACTTCAAAGAGATCCACTTGTTTGGGAGGATCCATTTGAATTTCGACCAGAAAGATTTTTAACAAGTCAAAAGAATTTTGATGTTAGAGGACAA GCCACACTCGAACTCCTGACGAACCACCGTGTGGACCAGCTCCAATACATAAGAGCATTTGAGGTCGAGACATGGATGAAGGAACTTTATGAGTTATGGAGGCTCAATAACAAAGGTGAAAAAGTGGTGGTGGAAATGAAAAAGAGATTGGCAGATGTAACGCTGAATACAATGTTCAAGATGGTGATTGGGAAGAAATTTTCCTCTACGGAGTATGGTAATGAAAAGTTTCAAAAGGTGTTGATAGAGTTCTTTGGATTGTTTGGTATATTTATTCTATCGGATTCGTTTCCATTTCTGAGTTGGTTGGACTTGGGAGGACATAAGAAAGTCATGAAGAAGACAGCCAAAATAATAGATGAGGTGTTTGATAAATTCCTCAAAGAGCATCGGGAGAGGATAAATAATTTTGGTGAACTACCGGTGGCGGAAAAGGACTTCATGGATGTTATGATTTCTACAGTTGAAGACGATGGACAACATTTCAATTGCCATGTTGATACTGTTATTAAAGCTACATGCTTGGTAAGCAAAATATATTAG ATLELLTNHRVDQLQYIRAFEVETWMKELYELWRLNNKGEKVVVEMKKRLADVTLNTMFKMVIGKKFSSTEYGNEKFQKVLIEFFGLFGIFILSDSFPFLSWLDLGGHKKVMKKTAKIIDEVFDKFLKEHRERINNFGELPVAEKDFMDVMISTVEDDGQHFNCHVDTVIKATCLVSKIY Homology
BLAST of Cucsat.G13395.T2 vs. ExPASy Swiss-Prot
Match: H2DH24 (Cytochrome P450 CYP82D47 OS=Panax ginseng OX=4054 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 8.7e-32 Identity = 78/182 (42.86%), Postives = 122/182 (67.03%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy Swiss-Prot
Match: O49858 (Cytochrome P450 82A3 OS=Glycine max OX=3847 GN=CYP82A3 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28 Identity = 74/181 (40.88%), Postives = 112/181 (61.88%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy Swiss-Prot
Match: Q9SZ46 (Xanthotoxin 5-hydroxylase CYP82C4 OS=Arabidopsis thaliana OX=3702 GN=CYP82C4 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27 Identity = 71/184 (38.59%), Postives = 111/184 (60.33%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy Swiss-Prot
Match: O49859 (Cytochrome P450 82A4 OS=Glycine max OX=3847 GN=CYP82A4 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26 Identity = 70/177 (39.55%), Postives = 114/177 (64.41%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy Swiss-Prot
Match: A0A0N7F297 (Demethylepipodophyllotoxin synthase OS=Sinopodophyllum hexandrum OX=93608 GN=CYP82D61 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26 Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. NCBI nr
Match: XP_011652397.1 (cytochrome P450 CYP82D47 [Cucumis sativus] >KGN60056.2 hypothetical protein Csa_002536 [Cucumis sativus]) HSP 1 Score: 350 bits (897), Expect = 2.00e-116 Identity = 171/175 (97.71%), Postives = 173/175 (98.86%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. NCBI nr
Match: KAA0032758.1 (cytochrome P450 CYP82D47-like [Cucumis melo var. makuwa] >TYJ98789.1 cytochrome P450 CYP82D47-like [Cucumis melo var. makuwa]) HSP 1 Score: 331 bits (849), Expect = 7.69e-112 Identity = 160/179 (89.39%), Postives = 170/179 (94.97%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. NCBI nr
Match: XP_008464769.1 (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis melo]) HSP 1 Score: 325 bits (833), Expect = 9.25e-107 Identity = 157/175 (89.71%), Postives = 166/175 (94.86%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. NCBI nr
Match: XP_022935746.1 (cytochrome P450 CYP82D47-like [Cucurbita moschata]) HSP 1 Score: 253 bits (645), Expect = 1.69e-78 Identity = 125/176 (71.02%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. NCBI nr
Match: XP_023535451.1 (cytochrome P450 CYP82D47-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251 bits (640), Expect = 9.47e-78 Identity = 124/176 (70.45%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy TrEMBL
Match: A0A0A0LIS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G853140 PE=3 SV=1) HSP 1 Score: 350 bits (897), Expect = 1.43e-119 Identity = 171/175 (97.71%), Postives = 173/175 (98.86%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy TrEMBL
Match: A0A5A7SQD8 (Cytochrome P450 CYP82D47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00980 PE=3 SV=1) HSP 1 Score: 331 bits (849), Expect = 3.72e-112 Identity = 160/179 (89.39%), Postives = 170/179 (94.97%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy TrEMBL
Match: A0A1S3CMD6 (cytochrome P450 CYP82D47-like OS=Cucumis melo OX=3656 GN=LOC103502577 PE=3 SV=1) HSP 1 Score: 325 bits (833), Expect = 4.48e-107 Identity = 157/175 (89.71%), Postives = 166/175 (94.86%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy TrEMBL
Match: A0A6J1F5K6 (cytochrome P450 CYP82D47-like OS=Cucurbita moschata OX=3662 GN=LOC111442570 PE=3 SV=1) HSP 1 Score: 253 bits (645), Expect = 8.19e-79 Identity = 125/176 (71.02%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Cucsat.G13395.T2 vs. ExPASy TrEMBL
Match: A0A6J1IFL6 (cytochrome P450 CYP82D47-like OS=Cucurbita maxima OX=3661 GN=LOC111476811 PE=3 SV=1) HSP 1 Score: 246 bits (628), Expect = 3.39e-76 Identity = 122/176 (69.32%), Postives = 147/176 (83.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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