Cucsat.G13250.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13250.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	aquaporin NIP2-1-like
Location	ctg1838: 3148844 .. 3152368 (+)
RNA-Seq Expression	Cucsat.G13250.T1
Synteny	Cucsat.G13250.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATAGTTACGTAAATTTCTCTCCCTATAATTCCTTGGCATTTCCTTATCAGAAATAAAAGAAATAGGAAGACAATAGGAAATTCACATTTTTGTTGCAAAAAGGCAAAGTGGCTAATTCTTATCTTTTAACAAAAATACCCCCAACAAATTTATTTATATGAAAATGAAAACCCAAAACAATATTCAAACCCTAAAACGAAAAAATAACATTTAATAGTATTTATTTTAATTTTTCGATTGGTCCCCAGCCACACTACACACTATACCGATTAATTTCGTTGCCTATAAGATATTTCCTTCCCTTCCCTTCCTTCAAAAATAAAACCATCTTACCAAAAATATTCAAACAAATAAATCACTCCCAATTTTTCAAATTCCCTAAAAAAAAAATGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGGTATGGATTTCTAGTTAATTTTGTTCTTGGTTGAATTTGAAGCGATTGGTTTGTGATCGGAGGAATTTTTGTGGTGGTTTAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTCATCTTCTTCTTCCTCCTCTGTTTTTCTCCCCAATTTTTATGCCAATTTACCATATTATCCTTTCGCTTTTTCATTTGTTATTTTTATGTTTTCTACAGATATTTTCTATTTTGAGAAAAGCCGTGCCAAATATTTAATTCACTTTTTTGCCTTTTTTTTTCTTCTTTTTTTAAGTTTTGATATTTAGTTTAAGAGTGGAAACCTATACTTAAAAAAGTTTCGAAATATTACATTTGTACCATTTAATTTTTTTATCATGTTATTTATTTTTAATTCTTTATTTTAAATTTAGTTTTCATTTACTCCCTACATTTCAATATTTAGTTTCAATTTTTGTTTGTTAATAGCACTGCTTGTTTTGTTATTCATACTTCAATAATTAAGTTCAAATGATTCTATCATAATTTTTTTACTTATAATTAATTAATTAATTTTTAGATATTAAAATTGATGTTGAGTATTTAAACCATATAAAATTCAAAAATCATGCTACATTTTCATGACTTAAAATACAGGAATTAAAAAGTTCCTTTTTTTTTTCTAAATGTAAAAAGAAAAAAAAAAGTTTTTCTTTCTTTCTTTTCAACATTAAAAGCATGCTTAGATATTGGTGGTTGAGTTGATAAGTGTACTGAGAATAGATGTGTATTAGGTAATATAATAAAAATGTCCAATAAAAAGACAAAACAATGTCTCCTTTCTTTTAACATTTAGAAAACAAAATCAAATTTATCATTATTTTTTTCAAGTTTACTAAATTAAAAATAGTAGAATTCTTATTTTAACTTTGGTACAAAATATTTGAACAATTATACACCGACAAATAATCACCCTGAATCTAGAGCTTTGGATTTCTAGTGCACTCTCTCATTTTCGAAAAATAAAATAAAATTATCAACATATTCTCTCTCTCTTTTTTTTTTTTCTTTTCAGAATACATACTCTTTTTTGCTCTATTTCACTCTTTTTTAAAAAATTTAAAAATTAAGAATATATACTCTTTTTCTTTTTCTTTTTTAGATTATATACTATCTTAATCTCTCTTTTTTTTCTGAAACTGTATTAAAAATTAAGATTATATATACTCTCTTACTTTTTTTTTTATTTAAGAATTATAATCTCTTACTTAAGAATTAAGAAAAAGGAACCCCCAATCAAATCAACAGTGATGGTGATATATATTATAAATGTCTATTTTATTGGACGGGCGGAAATTAATTATAATTTTTTTAAAATTGGAAATTTAGTGGTAATGATGTATGAGCTGCGCCACTTCATCAAAAAGAACAGTAAAAAATTATAAAAAAAGGGATGGAAAAGTGCAATTTATGCCACCTGAGAAGTGACGTGGATGAAGTGTACGGAAGATATTTCGATAAGTGTCCCCACCAGTTTGGCAGATATTATATATAAAAAGACTATTGGCAGATACTTTCTAAGGAAAGCAGCCTTAATTGCTTTTTAATTCACCAAAAGTCATCTTAATTGAGAATATGCTTTTCCATCTTTTCCAGTTTAGACCTTTCAAACCTTTTTTCTTTTTAACTCTTTTTCTATTTTATTTTCATATATATTTTTTACATGACTTAGTAATAATTGATGTATACTCTTATGGTTCGTGAATTGAATTTTATGCGGTTGATGCAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTGTAAGAGCATCTTATTGTTGTTTACCTCTTACTCACAATCTTCTCTTAATTTCCTTTCGCTAAGGTTCACTGCTTTTTTATATGTAATTTTTGGCAGATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGTAAGCAAAGCAATTATAATTGTTTCTTTTTTTGGCTTTTTGTTCTTAGCTGGAAGTTTTGTGGGTATCTGGAAAAATCTTAAACAAGATTTTGTTTTGATTGAATTCCAAATTTGGACCCTATAGTTTGGAGAAAATTTGTTTATTTATGAGATTTTATCAAACTATAAAGCTGGGGTTAACTATGTGTAGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGACATCCAATCGATGGGATCATGCAGCTGGAACTTCAAGTCATACCAAAATCAACTAGTTCAATTATTGTATAAATTAATGTGTAGCTCCTATAATAAAAGTTGTAGTTTAAGTTGTAGCTTTAGAAAAACTTAAGGTAAGGTTAGCTTTAATTGTCTTGCAATTTATTTGTTTTTTTAGTTTCGAGAGAAGAATGAATCTGAAATAGAGATTCATTTTTCTTTTTATTACTCTTGTTATTTTACAAGTGTGAGTTTTGATCTGATTTTTTTTACAATAATCAATCATAAAATTGGTTCTTCTTTTCAAGTTAATTCTCTCATATAT

Coding sequence (CDS)

ATGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGA

Protein sequence

MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATEKHTHSLSLH

Homology

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BLAST of Cucsat.G13250.T1 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-75
Identity = 140/244 (57.38%), Postives = 189/244 (77.46%), Query Frame = 0


Query: 14  LGNECSDPQPPLFRDR-FDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTK 73
           +G   +   PP + DR   +++PP   +K+V+EV++T+LLVFV+CG A + GSD+  +++
Sbjct: 20  IGTAQNSSMPPTYYDRSLADIFPPHLLKKVVSEVVSTFLLVFVTCGAAGIYGSDKDRISQ 79

Query: 74  LGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAA 133
           LG S+  GLIVTVMIY+VGHISGAHMNPAVT+AFA  R FPW QVP Y AAQ +G+  A+
Sbjct: 80  LGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICAS 139

Query: 134 FTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGS 193
           F L+ ++ PI  LGTT+P GP   +LV+EI+V+F MMFVT AVATDT+A+GEL G+AVGS
Sbjct: 140 FVLKAVLHPIAVLGTTTPTGPHWHSLVIEIIVTFNMMFVTLAVATDTRAVGELAGLAVGS 199

Query: 194 AVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATE 253
           AVCI+SIFAG +SGGSMNPAR++GPA+AS+ Y G+W+Y +GPV GTL  +++Y +IR  E
Sbjct: 200 AVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLGTLSGAWTYTYIRFEE 259

Query: 254 KHTH 257
             +H
Sbjct: 260 APSH 263

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BLAST of Cucsat.G13250.T1 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.3e-73
Identity = 134/218 (61.47%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 32  ELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYSVG 91
           + +PP   +K+V+EV+AT+LLVF++CG A +SGSD   +++LG SI  GLIVTVMIY+VG
Sbjct: 41  DFFPPHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVG 100

Query: 92  HISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTSPH 151
           HISGAHMNPAVT+AFA  R FPW QVP Y AAQ +GA  A+F L+ ++ P+  +GTT+P 
Sbjct: 101 HISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVDVIGTTTPV 160

Query: 152 GPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSMNP 211
           GP   +LV+E++V+F MMFVT AVATDT+A+GEL G+AVGSAVCI+SIFAG ISGGSMNP
Sbjct: 161 GPHWHSLVVEVIVTFNMMFVTLAVATDTRAVGELAGLAVGSAVCITSIFAGAISGGSMNP 220

Query: 212 ARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIR 250
           AR++GPA+AS++++G+W+Y +GPV GTL  +++Y FIR
Sbjct: 221 ARTLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTFIR 258

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BLAST of Cucsat.G13250.T1 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.9e-73
Identity = 136/223 (60.99%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 30  FDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYS 89
           F +++PP   +K+++EV+AT+LLVFV+CG A++ G D   +++LG S+  GLIVTVMIY+
Sbjct: 42  FADIFPPNLLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLIVTVMIYA 101

Query: 90  VGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTS 149
            GHISGAHMNPAVT++FA  R FPW QVP Y AAQ +GA  AAF LR ++ PI+ LGTT+
Sbjct: 102 TGHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTT 161

Query: 150 PHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSM 209
           P GP   ALV+EIVV+F MMFVT AVATD++A+GEL G+AVGSAVCI+SIFAGP+SGGSM
Sbjct: 162 PTGPHWHALVIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSM 221

Query: 210 NPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATE 253
           NPAR++ PA+AS+ Y G+W+Y +GPV GTL  ++ Y +IR  E
Sbjct: 222 NPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTYIRFEE 264

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BLAST of Cucsat.G13250.T1 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.6e-72
Identity = 131/221 (59.28%), Postives = 175/221 (79.19%), Query Frame = 0


Query: 32  ELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYSVG 91
           +++PP   +K+++EV+AT+LLVFV+CG A++ G D   +++LG S+  GLIVTVMIY+ G
Sbjct: 47  DIFPPHLGKKVISEVVATFLLVFVTCGAASIYGEDNARISQLGQSVAGGLIVTVMIYATG 106

Query: 92  HISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTSPH 151
           HISGAHMNPAVT++FA  R FPW QVP Y AAQ +GA  AAF L+ ++ PI  +GTT+P 
Sbjct: 107 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPS 166

Query: 152 GPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSMNP 211
           GP   AL +EIVV+F MMFVT AVATD++A+GEL G+AVGSAVCI+SIFAGP+SGGSMNP
Sbjct: 167 GPHWHALAIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNP 226

Query: 212 ARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATE 253
           AR++ PA+AS+ + G+W+Y +GPV GTL  ++ Y +IR  E
Sbjct: 227 ARTLAPAVASNVFTGLWIYFLGPVVGTLSGAWVYTYIRFEE 267

[Close]

BLAST of Cucsat.G13250.T1 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 9.6e-72
Identity = 135/232 (58.19%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 32  ELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYSVG 91
           +++PP   +K+++EV+AT+LLVFV+CG A++ G D   +++LG S+  GLIVTVMIY+ G
Sbjct: 44  DIFPPHLGKKVISEVVATFLLVFVTCGAASIYGEDNRRISQLGQSVAGGLIVTVMIYATG 103

Query: 92  HISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTSPH 151
           HISGAHMNPAVT++FA  R FPW QVP Y AAQ +GA  AAF L+ ++ PI  +GTT+P 
Sbjct: 104 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPS 163

Query: 152 GPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSMNP 211
           GP   AL++EIVV+F MMFVT AVATD++A+GEL G+AVGSAVCI+SIFAGP+SGGSMNP
Sbjct: 164 GPHWHALLIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNP 223

Query: 212 ARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATE----KHTHSLS 260
           AR++ PA+AS+ + G+W+Y +GPV GTL  ++ Y +IR  E    K T  LS
Sbjct: 224 ARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTYIRFEEAPAAKDTQRLS 275

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BLAST of Cucsat.G13250.T1 vs. NCBI nr
Match: APT69294.1 (LSi6 [Cucumis sativus var. sativus] >KGN59571.1 hypothetical protein Csa_000858 [Cucumis sativus])

HSP 1 Score: 508 bits (1308), Expect = 2.88e-181
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY
Sbjct: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL
Sbjct: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           ASFSYNFIRATEKHTHSLSLH
Sbjct: 241 ASFSYNFIRATEKHTHSLSLH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. NCBI nr
Match: NP_001292702.1 (aquaporin NIP2-1-like [Cucumis sativus] >ACU29604.1 Si transport-like protein 2 [Cucumis sativus])

HSP 1 Score: 506 bits (1304), Expect = 1.17e-180
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDEPVVTKLGASITCGLIVTVMIYS GHISGAHMNPAVTIAFAAVRRFPWRQVPLY
Sbjct: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSAGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL
Sbjct: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           ASFSYNFIRATEKHTHSLSLH
Sbjct: 241 ASFSYNFIRATEKHTHSLSLH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. NCBI nr
Match: NP_001380719.1 (aquaporin NIP2-2 [Cucumis melo])

HSP 1 Score: 483 bits (1244), Expect = 1.64e-171
Identity = 246/261 (94.25%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARR+D+EEAFIALGNECSDPQP LFRDRFDE+YPP FSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRNDNEEAFIALGNECSDPQPSLFRDRFDEVYPPGFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDE  V+KLGASITCGLIVTVMIY+VGHISGAHMNPAVTIAFAAVRRFPW+QVPLY
Sbjct: 61  ALSGSDEQEVSKLGASITCGLIVTVMIYAVGHISGAHMNPAVTIAFAAVRRFPWKQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRIL+DPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILLDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGG+AVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGP+TGTLL
Sbjct: 181 AIGELGGIAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPITGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           A+FSYNFIRATEKHTHSLS H
Sbjct: 241 AAFSYNFIRATEKHTHSLSSH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. NCBI nr
Match: XP_038906096.1 (aquaporin NIP2-2-like [Benincasa hispida])

HSP 1 Score: 421 bits (1083), Expect = 6.91e-147
Identity = 219/256 (85.55%), Postives = 234/256 (91.41%), Query Frame = 0


Query: 5   SDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSG 64
           S +EEA I  G+ECSDPQ   FRDRF ELYPPEFSRKLVAEVIATYLLVFV+CG AALS 
Sbjct: 13  SSNEEALI--GSECSDPQQSFFRDRFYELYPPEFSRKLVAEVIATYLLVFVTCGAAALSV 72

Query: 65  SDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQ 124
           SDE  V+KLGASIT GLIVTVMIY+VGHISGAHMNPAVT AFAAVRRFPW QVPLYAAAQ
Sbjct: 73  SDEREVSKLGASITGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWNQVPLYAAAQ 132

Query: 125 LSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGE 184
           LSGAT+AAFTLRIL+DPIQDLGTTSP GP  KAL+MEIVVSFCMMFVTSAVATDTKA+GE
Sbjct: 133 LSGATTAAFTLRILLDPIQDLGTTSPSGPIFKALLMEIVVSFCMMFVTSAVATDTKAVGE 192

Query: 185 LGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFS 244
           L G+AVGSAVCI+SIFAGPISGGSMNPARSIGPAIASSRYEGIWVY++GPV GTLL +FS
Sbjct: 193 LAGIAVGSAVCITSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYLVGPVAGTLLGAFS 252

Query: 245 YNFIRATEKHTHSLSL 260
           YNFIRATEKH+ SLSL
Sbjct: 253 YNFIRATEKHSRSLSL 266

[Close]

BLAST of Cucsat.G13250.T1 vs. NCBI nr
Match: XP_023528272.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408 bits (1049), Expect = 9.35e-142
Identity = 208/253 (82.21%), Postives = 230/253 (90.91%), Query Frame = 0


Query: 8   EEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDE 67
           EEAFI++G + SDP    FRDRF +L PPEFSRKLVAEVIATYLLVFV+CG AALS SDE
Sbjct: 11  EEAFISVGTDYSDPHQSFFRDRFQQLCPPEFSRKLVAEVIATYLLVFVTCGAAALSVSDE 70

Query: 68  PVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSG 127
             V+KLGAS+T GLIVTVMIY+VGHISGAHMNPAVT AFAAVRRFPW+QVPLYAAAQLSG
Sbjct: 71  RQVSKLGASMTGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWKQVPLYAAAQLSG 130

Query: 128 ATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGG 187
           ATSAAFTLRIL+DPI++LGTTSP GP  KAL++EIVVSFCMMFVTSAVATDTKAIGEL G
Sbjct: 131 ATSAAFTLRILLDPIKELGTTSPSGPEFKALIVEIVVSFCMMFVTSAVATDTKAIGELAG 190

Query: 188 VAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNF 247
           +AVGS+VCI+SIFAGPISGGSMNPARSIGPAIASS YEGIWVY++GPVTGTLL ++SYNF
Sbjct: 191 IAVGSSVCITSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVTGTLLGAWSYNF 250

Query: 248 IRATEKHTHSLSL 260
           IR +EKH H LSL
Sbjct: 251 IRTSEKHGHQLSL 263

[Close]

BLAST of Cucsat.G13250.T1 vs. ExPASy TrEMBL
Match: A0A1L7B7J9 (LSi6 OS=Cucumis sativus var. sativus OX=869827 GN=LSi6 PE=2 SV=1)

HSP 1 Score: 508 bits (1308), Expect = 1.39e-181
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY
Sbjct: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL
Sbjct: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           ASFSYNFIRATEKHTHSLSLH
Sbjct: 241 ASFSYNFIRATEKHTHSLSLH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. ExPASy TrEMBL
Match: A0A0A0LHR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G826650 PE=3 SV=1)

HSP 1 Score: 508 bits (1308), Expect = 1.39e-181
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY
Sbjct: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL
Sbjct: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           ASFSYNFIRATEKHTHSLSLH
Sbjct: 241 ASFSYNFIRATEKHTHSLSLH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. ExPASy TrEMBL
Match: G8XUV4 (Si transport-like protein 2 OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 506 bits (1304), Expect = 5.67e-181
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDEPVVTKLGASITCGLIVTVMIYS GHISGAHMNPAVTIAFAAVRRFPWRQVPLY
Sbjct: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSAGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL
Sbjct: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           ASFSYNFIRATEKHTHSLSLH
Sbjct: 241 ASFSYNFIRATEKHTHSLSLH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. ExPASy TrEMBL
Match: A0A1S3B8P6 (aquaporin NIP2-1-like OS=Cucumis melo OX=3656 GN=LOC103487003 PE=3 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 7.94e-172
Identity = 246/261 (94.25%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVA 60
           MARR+D+EEAFIALGNECSDPQP LFRDRFDE+YPP FSRKLVAEVIATYLLVFVSCGVA
Sbjct: 1   MARRNDNEEAFIALGNECSDPQPSLFRDRFDEVYPPGFSRKLVAEVIATYLLVFVSCGVA 60

Query: 61  ALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLY 120
           ALSGSDE  V+KLGASITCGLIVTVMIY+VGHISGAHMNPAVTIAFAAVRRFPW+QVPLY
Sbjct: 61  ALSGSDEQEVSKLGASITCGLIVTVMIYAVGHISGAHMNPAVTIAFAAVRRFPWKQVPLY 120

Query: 121 AAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180
           AAAQLSGATSAAFTLRIL+DPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK
Sbjct: 121 AAAQLSGATSAAFTLRILLDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTK 180

Query: 181 AIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLL 240
           AIGELGG+AVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGP+TGTLL
Sbjct: 181 AIGELGGIAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPITGTLL 240

Query: 241 ASFSYNFIRATEKHTHSLSLH 261
           A+FSYNFIRATEKHTHSLS H
Sbjct: 241 AAFSYNFIRATEKHTHSLSSH 261

[Close]

BLAST of Cucsat.G13250.T1 vs. ExPASy TrEMBL
Match: A0A6J1J0H5 (aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482345 PE=3 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 7.48e-141
Identity = 206/253 (81.42%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 8   EEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDE 67
           EEAFI++G + SDP    FRDRF +L PPEFSRKLVAEVIATYLLVFV+CG AALS SDE
Sbjct: 11  EEAFISVGTDYSDPHQSFFRDRFQQLCPPEFSRKLVAEVIATYLLVFVTCGAAALSVSDE 70

Query: 68  PVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSG 127
             V+KLGAS+T GLIVTVMIY+VGHISGAHMNPAVT AFAAV+RFPW+QVPLYAAAQLSG
Sbjct: 71  RQVSKLGASMTGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVKRFPWKQVPLYAAAQLSG 130

Query: 128 ATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGG 187
           ATSAAFTLRIL+DPI++LGTTSP GP  KAL++EIVVSFCMMFVTSAVATDTKAIGEL G
Sbjct: 131 ATSAAFTLRILLDPIKELGTTSPSGPEFKALIVEIVVSFCMMFVTSAVATDTKAIGELAG 190

Query: 188 VAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNF 247
           +AVGS+VCI+SIFAGPISGGSMNPARSIGPAIASS YEGIWVY++GPV GTLL ++SYNF
Sbjct: 191 IAVGSSVCITSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVAGTLLGAWSYNF 250

Query: 248 IRATEKHTHSLSL 260
           IR +EKH H LSL
Sbjct: 251 IRTSEKHGHQLSL 263

The following BLAST results are available for this feature:

BLAST of Cucsat.G13250.T1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q19KC1	2.4e-75	57.38	Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2	[more]
Q6Z2T3	2.3e-73	61.47	Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1	[more]
Q67WJ8	3.9e-73	60.99	Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1	[more]
Q9AT74	5.6e-72	59.28	Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1	[more]
Q9ATN2	9.6e-72	58.19	Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1	[more]

BLAST of Cucsat.G13250.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
APT69294.1	2.88e-181	100.00	LSi6 [Cucumis sativus var. sativus] >KGN59571.1 hypothetical protein Csa_000858 ...	[more]
NP_001292702.1	1.17e-180	99.62	aquaporin NIP2-1-like [Cucumis sativus] >ACU29604.1 Si transport-like protein 2 ...	[more]
NP_001380719.1	1.64e-171	94.25	aquaporin NIP2-2 [Cucumis melo]	[more]
XP_038906096.1	6.91e-147	85.55	aquaporin NIP2-2-like [Benincasa hispida]	[more]
XP_023528272.1	9.35e-142	82.21	aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G13250.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1L7B7J9	1.39e-181	100.00	LSi6 OS=Cucumis sativus var. sativus OX=869827 GN=LSi6 PE=2 SV=1	[more]
A0A0A0LHR6	1.39e-181	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G826650 PE=3 SV=1	[more]
G8XUV4	5.67e-181	99.62	Si transport-like protein 2 OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A1S3B8P6	7.94e-172	94.25	aquaporin NIP2-1-like OS=Cucumis melo OX=3656 GN=LOC103487003 PE=3 SV=1	[more]
A0A6J1J0H5	7.48e-141	81.42	aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482345 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PRINTS	PR00783	MINTRINSICP	coord: 160..178 score: 22.08 coord: 228..248 score: 33.09 coord: 116..135 score: 34.45 coord: 40..59 score: 37.31 coord: 191..213 score: 40.01 coord: 79..103 score: 49.97
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 36..245 e-value: 2.7E-53 score: 181.0
IPR023271	Aquaporin-like	GENE3D	1.20.1080.10	Glycerol uptake facilitator protein.	coord: 23..259 e-value: 1.0E-65 score: 223.2
IPR023271	Aquaporin-like	SUPERFAMILY	81338	Aquaporin-like	coord: 32..254
IPR034294	Aquaporin transporter	PANTHER	PTHR45724	AQUAPORIN NIP2-1	coord: 29..260
None	No IPR available	PANTHER	PTHR45724:SF30	MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED	coord: 29..260
IPR022357	Major intrinsic protein, conserved site	PROSITE	PS00221	MIP	coord: 97..105

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13250	Cucsat.G13250	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13250.T1.E1	Cucsat.G13250.T1.E1	exon
Cucsat.G13250.T1.E2	Cucsat.G13250.T1.E2	exon
Cucsat.G13250.T1.E3	Cucsat.G13250.T1.E3	exon
Cucsat.G13250.T1.E4	Cucsat.G13250.T1.E4	exon
Cucsat.G13250.T1.E5	Cucsat.G13250.T1.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13250.T1.C1	Cucsat.G13250.T1.C1	CDS
Cucsat.G13250.T1.C2	Cucsat.G13250.T1.C2	CDS
Cucsat.G13250.T1.C3	Cucsat.G13250.T1.C3	CDS
Cucsat.G13250.T1.C4	Cucsat.G13250.T1.C4	CDS
Cucsat.G13250.T1.C5	Cucsat.G13250.T1.C5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13250.T1	Cucsat.G13250.T1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015267	channel activity